GRMZM2G034804 (Zea mays)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 GRMZM2G034804 T54025_0.6 MaizeSequence (2009-Oct-16)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G034804_P01 RRM 36 106
GRMZM2G034804_P02 RRM 36 106
GRMZM2G034804_P03 RRM 36 81
GRMZM2G034804_P03 RRM 112 137
GRMZM2G034804_P04 RRM 1 66
GRMZM2G034804_P06 RRM 36 106
GRMZM2G034804_P07 RRM 36 81
GRMZM2G034804_P08 RRM 1 41

Links

Other RRM family RBPs
Other Zea mays RBPs

91 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
2118330B Xenopus laevis 2118330B N 0.000
AAH72902 Xenopus laevis AAH72902 N 0.000
ACLA_080400 Aspergillus clavatus CADACLAG00007885 N 0.000
AFLA_046450 Aspergillus flavus CADAFLAG00005972 N 0.000
AFUA_2G08570 Aspergillus fumigatus CADAFUAG00004718 N 0.000
AMAG_02834 Allomyces macrogynus AMAG_02834 N 0.000
amel4_ncbi_hmm3188 Apis mellifera amel4_ncbi_hmm3188 N 0.718
Ame_R004608 Ailuropoda melanoleuca Ame_R004608 N 0.761
An12g03930 Aspergillus niger CADANGAG00009835 N 0.000
Aqu1.228507 Amphimedon queenslandica Aqu1.228507 N 0.000
B5G279_TAEGU Taeniopygia guttata ENSTGUG00000007323 N 0.000
BC1G_04395 Botrytis cinerea BC1G_04395 N 0.000
BDBG_08091 Blastomyces dermatitidis BDBG_08091 N 0.000
BGIBMGA007585 Bombyx mori BGIBMGA007585 N 0.732
CAA59259 Xenopus laevis CAA59259 N 0.000
CAOG_06930 Capsaspora owczarzaki CAOG_06930 N 0.000
cbc2 Schizosaccharomyces pombe SPBC13A2.01c N 0.000
CHGG_03355 Chaetomium globosum CHGG_03355 N 0.000
CpipJ_CPIJ003555 Culex pipiens CpipJ_CPIJ003555 N 0.704
CPSG_08054 Coccidioides posadasii CPSG_08054 N 0.000
DGIL_AUG5s12516g4t1 Acyrtosiphon pisum DGIL_AUG5s12516g4t1 N 0.000
EAT82863.2 Phaeosphaeria nodorum EAT82863.2 N 0.000
EFA74823.1 Polysphondylium pallidum EFA74823.1 N 0.732
ENSACAG00000015128 Anolis carolinensis ENSACAG00000015128 N 0.000
ENSMEUG00000004730 Macropus eugenii ENSMEUG00000004730 N 0.746
ENSMEUG00000008126 Macropus eugenii ENSMEUG00000008126 N 0.746
ENSMGAG00000002257 Meleagris gallopavo ENSMGAG00000002257 N 0.000
ENSMGAG00000006728 Meleagris gallopavo ENSMGAG00000006728 N 0.718
ENSPPYG00000014449 Pongo pygmaeus ENSPPYG00000014449 N 0.761
ENSSSCG00000011835 Sus scrofa ENSSSCG00000011835 N 0.761
ENSSSCG00000011840 Sus scrofa ENSSSCG00000011840 N 0.761
ENSSTOG00000001584 Spermophilus tridecemlineatus ENSSTOG00000001584 N 0.761
estExt_fgenesh1_kg.C_sca_10_chr8_2_00014 Nectria haematococca estExt_fgenesh1_kg.C_sca_10_chr8_2_00014 N 0.704
estExt_fgenesh1_pm.C_20437 Schizophyllum commune estExt_fgenesh1_pm.C_20437 N 0.000
estExt_fgenesh2_kg.C_120041 Serpula lacrymans estExt_fgenesh2_kg.C_120041 N 0.000
estExt_fgenesh2_kg.C_20664 Agaricus bisporus estExt_fgenesh2_kg.C_20664 N 0.000
estExt_Genewise1.C_10147 Cochliobolus heterostrophus C5 estExt_Genewise1.C_10147 N 0.000
estExt_Genewise1Plus.C_150343 Trichoderma atroviride estExt_Genewise1Plus.C_150343 N 0.000
estExt_Genewise1Plus.C_40730 Myceliophthora thermophila estExt_Genewise1Plus.C_40730 N 0.000
estExt_Genewise1Plus.C_50921 Neurospora discreta estExt_Genewise1Plus.C_50921 N 0.000
estExt_Genewise1_worm.C_60324 Laccaria bicolor estExt_Genewise1_worm.C_60324 N 0.000
e_gw1.10.746.1 Trichoderma virens e_gw1.10.746.1 N 0.704
e_gw1.17.191.1 Trichoderma reesei e_gw1.17.191.1 N 0.718
e_gw1.18.125.1 Batrachochytrium dendrobatidis e_gw1.18.125.1 N 0.000
e_gw1.3.1174.1 Thielavia terrestris e_gw1.3.1174.1 N 0.000
e_gw1.40.70.1 Melampsora laricis populina e_gw1.40.70.1 N 0.000
e_gw1.80.70.1 Selaginella moellendorfii e_gw1.80.70.1 N 0.775
fgenesh1_pg.C_scaffold_1000747 Cryphonectria parasitica fgenesh1_pg.C_scaffold_1000747 N 0.000
fgenesh1_pm.00772_#_82 Aspergillus carbonarius fgenesh1_pm.00772_#_82 N 0.000
fgeneshMC_pm.5_#_40 Mucor circinelloides fgeneshMC_pm.5_#_40 N 0.704
FGSG_05488 Fusarium graminearum FGSG_05488 N 0.000
FOXG_09405 Fusarium oxysporum FOXG_09405 N 0.000
FVEG_07036 Fusarium verticillioides FVEG_07036 N 0.704
GID1.0044779 Dictyostelium purpureum GID1.0044779 N 0.718
GLRG_00177 Colletotrichum graminicola GLRG_00177 N 0.000
GSTUMT00010626001 Tuber melanosporum GSTUMT00010626001 N 0.000
gw.81.90.1 Branchiostoma floridae gw.81.90.1 N 0.000
gw.93.114.1 Branchiostoma floridae gw.93.114.1 N 0.000
gw1.1.1171.1 Sporobolomyces roseus gw1.1.1171.1 N 0.000
gw1.1.2136.1 Pleurotus ostreatus gw1.1.2136.1 N 0.000
gw1.29.143.1 Phycomyces blakesleeanus gw1.29.143.1 N 0.718
gwh2.1.1054.1 Phanerochaete chrysosporium gwh2.1.1054.1 N 0.000
HCAG_07341 Histoplasma capsulatum HCAG_07341 N 0.000
LOAG_03270 Loa loa LOAG_03270 N 0.746
LOC100404338 Callithrix jacchus ENSCJAG00000013735 N 0.761
MCYG_04468 Microsporum canis MCYG_04468 N 0.000
MGG_06296 Magnaporthe oryzae MGG_06296 N 0.000
MGYG_02166 Microsporum gypseum MGYG_02166 N 0.000
nasonia_NCBI_hmm134534 Nasonia vitripennis nasonia_NCBI_hmm134534 N 0.718
nasonia_NCBI_hmm1532803 Nasonia vitripennis nasonia_NCBI_hmm1532803 N 0.718
NCBP2 Tupaia belangeri ENSTBEG00000015222 N 0.761
ncbp2 Xenopus tropicalis ENSXETG00000019384 N 0.000
NCBP2 Taeniopygia guttata ENSTGUG00000008864 N 0.704
NCBP2 Macaca mulatta ENSMMUG00000007825 N 0.761
ncbp2 Dictyostelium discoideum DDB_G0287197 N 0.718
NCBP2 Myotis lucifugus ENSMLUG00000017500 N 0.761
NCBP2 Microcebus murinus ENSMICG00000003162 N 0.761
NCBP2 Loxodonta africana ENSLAFG00000006372 N 0.761
NCBP2 Gallus gallus ENSGALG00000006843 N 0.718
NCBP2 Homo sapiens ENSG00000114503 N 0.761
NCBP2 Equus caballus ENSECAG00000016153 N 0.761
ncbp2 Danio rerio ENSDARG00000014898 N 0.000
NCBP2 Canis familiaris ENSCAFG00000013100 N 0.761
NCBP2 Tursiops truncatus ENSTTRG00000013908 N 0.746
Ncbp2 Mus musculus ENSMUSG00000022774 N 0.761
NCBP2 Oryctolagus cuniculus ENSOCUG00000006738 N 0.761
NCBP2 Pan troglodytes ENSPTRG00000015789 N 0.761
NCBP2 Oryzias latipes ENSORLG00000011235 N 0.000
NCBP2 Otolemur garnettii ENSOGAG00000005009 N 0.761
NCBP2_AEDAE Aedes aegypti AAEL006135 N 0.718
NCBP2_ANOGA Anopheles gambiae AGAP002547 N 0.718
NCBP2_BOVIN Bos taurus ENSBTAG00000008873 N 0.761
NCBP2_CHICK Gallus gallus ENSGALG00000005753 N 0.000
NCBP2_CULQU Culex quinquefasciatus CPIJ003555 N 0.704
NCBP2_IXOSC Ixodes scapularis ISCW017479 N 0.732
NCU00210 Neurospora crassa NCU00210 N 0.000
NFIA_084190 Neosartorya fischeri CADNFIAG00008064 N 0.000
P52299 Xenopus laevis P52299 N 0.000
PABG_07236 Paracoccidioides brasiliensis PABG_07236 N 0.000
Pa_7_2520 Podospora anserina Pa_7_2520 N 0.000
Pc13g04070 Penicillium chrysogenum Pc13g04070 N 0.000
PGTG_01720 Puccinia graminis PGTG_01720 N 0.000
PHUM535920 Pediculus humanus PHUM535920 N 0.718
Pigz Rattus norvegicus ENSRNOG00000001746 N 0.761
PMAA_070830 Penicillium marneffei PMAA_070830 N 0.000
PredSwiss_ASS2010_2397.2 Pneumocystis carinii PredSwiss_ASS2010_2397.2 N 0.000
PredSwiss_CON682.3 Pneumocystis carinii PredSwiss_CON682.3 N 0.000
PTRG_00402 Pyrenophora tritici repentis PTRG_00402 N 0.000
SJAG_01064 Schizosaccharomyces japonicus SJAG_01064 N 0.000
SNOG_09598 Stagonospora nodorum SNOG_09598 N 0.000
SOCG_01831 Schizosaccharomyces octosporus SOCG_01831 N 0.000
SPOG_01217 Schizosaccharomyces cryophilus SPOG_01217 N 0.000
SPPG_00516 Spizellomyces punctatus SPPG_00516 N 0.732
SS1G_13629 Sclerotinia sclerotiorum SS1G_13629 N 0.000
TEQG_01953 Trichophyton equinum TEQG_01953 N 0.000
TERG_03424 Trichophyton rubrum TERG_03424 N 0.000
TESG_01120 Trichophyton tonsurans TESG_01120 N 0.000
VDAG_05874 Verticillium dahliae VDAG_05874 N 0.000
VDBG_06810 Verticillium albo atrum VDBG_06810 N 0.000
WUBG_16568 Wuchereria bancrofti WUBG_16568 N 0.746
XM_001371285.1 Monodelphis domestica ENSMODG00000023276 N 0.746
XM_001373408.1 Monodelphis domestica ENSMODG00000015908 N 0.718