MEX3B (Tetraodon nigroviridis)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSTNIG00000003398 T19595_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
CG11360
M122_0.6 		Drosophila melanogaster GAGUDW RNAcompete
Ray et al.(2013)
RNCMPT00129 		0.861
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000005985 KH 56 116
ENSTNIP00000005985 KH 154 213

Links

Other KH family RBPs
Other Tetraodon nigroviridis RBPs

162 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAEL012708 Aedes aegypti AAEL012708 I 0.738
Ame_R004658 Ailuropoda melanoleuca Ame_R004658 I 0.959
Ame_R015561 Ailuropoda melanoleuca Ame_R015561 I 0.877
Ame_R011921 Ailuropoda melanoleuca Ame_R011921 I 0.770
Ame_R007174 Ailuropoda melanoleuca Ame_R007174 I 0.983
Aqu1.215178 Amphimedon queenslandica Aqu1.215178 I 0.795
MEX3C Anolis carolinensis ENSACAG00000010265 I 0.802
MEX3A Anolis carolinensis ENSACAG00000003739 N 0.738
MEX3B Anolis carolinensis ENSACAG00000011072 I 0.818
AGAP013259 Anopheles gambiae AGAP013259 I 0.738
amel4_ncbi_hmm6985 Apis mellifera amel4_ncbi_hmm6985 I 0.917
BGIBMGA012436 Bombyx mori BGIBMGA012436 I 0.713
MEX3D Bos taurus ENSBTAG00000044028 I 0.777
MEX3A Bos taurus ENSBTAG00000019158 I 0.877
MEX3B Bos taurus ENSBTAG00000016630 I 0.983
Q2YDI4_BOVIN Bos taurus ENSBTAG00000014886 I 0.802
estExt_fgenesh2_pg.C_2010087 Branchiostoma floridae estExt_fgenesh2_pg.C_2010087 I 0.975
CBN20397 Caenorhabditis brenneri CBN20397 I 0.811
CBN24563 Caenorhabditis brenneri CBN24563 I 0.811
CBG05100 Caenorhabditis briggsae CBG05100 I 0.795
mex-3 Caenorhabditis elegans F53G12.5 I 0.803
CJA18034 Caenorhabditis japonica CJA18034 I 0.787
CRE03823 Caenorhabditis remanei CRE03823 I 0.811
LOC100410413 Callithrix jacchus ENSCJAG00000007711 I 0.877
LOC100410023 Callithrix jacchus ENSCJAG00000001902 I 0.959
MKNK2 Callithrix jacchus ENSCJAG00000000539 I 0.738
MEX3B Callithrix jacchus ENSCJAG00000008043 I 0.983
MEX3D Canis familiaris ENSCAFG00000023712 I 0.777
MEX3B Canis familiaris ENSCAFG00000013759 I 0.826
MEX3C Canis familiaris ENSCAFG00000000162 I 0.934
e_gw1.312.50.1 Capitella teleta e_gw1.312.50.1 I 0.702
MEX3B Cavia porcellus ENSCPOG00000023663 I 0.893
MEX3A Cavia porcellus ENSCPOG00000020219 I 0.877
MEX3C Cavia porcellus ENSCPOG00000009646 I 0.959
ENSCPOG00000008241 Cavia porcellus ENSCPOG00000008241 I 0.975
MEX3C Choloepus hoffmanni ENSCHOG00000004915 I 0.959
ENSCING00000002603 Ciona intestinalis ENSCING00000002603 I 0.934
CpipJ_CPIJ010634 Culex pipiens CpipJ_CPIJ010634 I 0.738
CPIJ010634 Culex quinquefasciatus CPIJ010634 I 0.738
MEX3B Danio rerio ENSDARG00000058369 I 0.992
MEX3C Danio rerio ENSDARG00000068971 I 0.769
MEX3A Danio rerio ENSDARG00000076638 I 0.869
e_gw1.15.409.1 Daphnia pulex e_gw1.15.409.1 I 0.901
MEX3C Dasypus novemcinctus ENSDNOG00000006544 I 0.959
MEX3B Dasypus novemcinctus ENSDNOG00000012736 I 0.942
Mex3a Dipodomys ordii ENSDORG00000002921 I 0.877
Mex3c Dipodomys ordii ENSDORG00000007962 I 0.793
GF20555 Drosophila ananassae FBgn0097561 I 0.852
GG16398 Drosophila erecta FBgn0108630 I 0.861
GH23938 Drosophila grimshawi FBgn0131395 I 0.861
CG11360 Drosophila melanogaster FBgn0039920 D 0.861
GL18139 Drosophila persimilis FBgn0155742 I 0.861
GA10947-RA Drosophila pseudoobscura FBgn0071003 I 0.861
GM26809 Drosophila sechellia FBgn0181661 I 0.861
GD24410 Drosophila simulans FBgn0195748 I 0.861
GJ18673 Drosophila virilis FBgn0205827 I 0.861
GK13594 Drosophila willistoni FBgn0215602 I 0.861
GE14558 Drosophila yakuba FBgn0232157 I 0.861
MEX3C Echinops telfairi ENSETEG00000003647 I 0.802
MEX3B Equus caballus ENSECAG00000013497 I 0.983
LOC100063974 Equus caballus ENSECAG00000007279 N 0.730
MEX3C Equus caballus ENSECAG00000021727 I 0.959
MEX3C Erinaceus europaeus ENSEEUG00000010864 I 0.793
MEX3D Felis catus ENSFCAG00000002615 I 0.769
MEX3A Gallus gallus ENSGALG00000014016 N 0.746
MEX3D Gallus gallus ENSGALG00000001106 I 0.793
MEX3D Gasterosteus aculeatus ENSGACG00000015299 I 0.910
MEX3A Gasterosteus aculeatus ENSGACG00000013282 N 0.719
MEX3B Gasterosteus aculeatus ENSGACG00000012530 I 0.950
MEX3C Gasterosteus aculeatus ENSGACG00000007490 I 0.959
MEX3D Gorilla gorilla ENSGGOG00000001083 I 0.893
MEX3B Gorilla gorilla ENSGGOG00000000597 I 0.983
MEX3A Gorilla gorilla ENSGGOG00000004513 I 0.877
MEX3C Gorilla gorilla ENSGGOG00000014875 I 0.959
MEX3D Homo sapiens ENSG00000181588 I 0.893
MEX3B Homo sapiens ENSG00000183496 I 0.983
MEX3C Homo sapiens ENSG00000176624 I 0.959
XP_002168292.1 Hydra magnipapillata XP_002168292.1 I 0.861
estExt_Genewise1.C_sca_540218 Lottia gigantea estExt_Genewise1.C_sca_540218 I 0.926
MEX3A Loxodonta africana ENSLAFG00000009220 N 0.730
MEX3C Loxodonta africana ENSLAFG00000027818 I 0.959
MEX3B Loxodonta africana ENSLAFG00000006027 I 0.983
MEX3A Macaca mulatta ENSMMUG00000022307 I 0.877
MEX3C Macaca mulatta ENSMMUG00000023652 I 0.959
MEX3B Macaca mulatta ENSMMUG00000018639 I 0.983
MEX3D Macropus eugenii ENSMEUG00000016404 I 0.910
MEX3C Macropus eugenii ENSMEUG00000015929 I 0.793
MEX3B Macropus eugenii ENSMEUG00000002402 I 0.975
MEX3A Meleagris gallopavo ENSMGAG00000015563 N 0.746
MEX3D Meleagris gallopavo ENSMGAG00000002325 I 0.803
MEX3A Microcebus murinus ENSMICG00000002233 I 0.803
MEX3C Microcebus murinus ENSMICG00000005815 I 0.793
MEX3B Monodelphis domestica ENSMODG00000019387 I 0.983
MEX3A Monodelphis domestica ENSMODG00000016954 I 0.877
MEX3C Monodelphis domestica ENSMODG00000011001 I 0.959
MEX3D Monodelphis domestica ENSMODG00000004116 I 0.910
Mex3c Mus musculus ENSMUSG00000037253 I 0.959
Mex3b Mus musculus ENSMUSG00000057706 I 0.826
Mex3d Mus musculus ENSMUSG00000048696 I 0.893
MEX3A Myotis lucifugus ENSMLUG00000010185 N 0.736
MEX3D Myotis lucifugus ENSMLUG00000017018 N 0.754
MEX3C Myotis lucifugus ENSMLUG00000012585 I 0.793
nasonia_NCBI_hmm456104 Nasonia vitripennis nasonia_NCBI_hmm456104 I 0.917
gw.320.9.1 Nematostella vectensis gw.320.9.1 I 0.877
MEX3D Ochotona princeps ENSOPRG00000008708 I 0.769
MEX3B Ochotona princeps ENSOPRG00000009604 I 0.983
MEX3A Ochotona princeps ENSOPRG00000002937 I 0.877
SNAPOd2T00016811001 Oikopleura dioica SNAPOd2T00016811001 I 0.746
MEX3D Ornithorhynchus anatinus ENSOANG00000011764 I 0.877
MEX3C Ornithorhynchus anatinus ENSOANG00000008116 I 0.802
ENSOCUG00000014295 Oryctolagus cuniculus ENSOCUG00000014295 I 0.803
MEX3A Oryctolagus cuniculus ENSOCUG00000005640 I 0.877
MEX3B Oryctolagus cuniculus ENSOCUG00000011603 I 0.826
ENSOCUG00000012549 Oryctolagus cuniculus ENSOCUG00000012549 I 0.959
MEX3C Oryzias latipes ENSORLG00000004985 I 0.959
MEX3B Otolemur garnettii ENSOGAG00000016362 I 0.777
MEX3D Pan troglodytes ENSPTRG00000010208 I 0.893
MEX3A Pan troglodytes ENSPTRG00000030373 N 0.736
MEX3C Pan troglodytes ENSPTRG00000010029 I 0.959
MEX3B Pan troglodytes ENSPTRG00000007373 I 0.983
PHUM418100 Pediculus humanus PHUM418100 I 0.754
ENSPPYG00000009324 Pongo pygmaeus ENSPPYG00000009324 I 0.893
ENSPPYG00000006723 Pongo pygmaeus ENSPPYG00000006723 I 0.983
ENSPPYG00000000729 Pongo pygmaeus ENSPPYG00000000729 I 0.877
MEX3B Procavia capensis ENSPCAG00000014150 I 0.818
MEX3D Procavia capensis ENSPCAG00000010972 I 0.760
MEX3C Procavia capensis ENSPCAG00000009258 I 0.967
MEX3A Pteropus vampyrus ENSPVAG00000010333 I 0.820
MEX3B Pteropus vampyrus ENSPVAG00000000093 I 0.983
MEX3C Pteropus vampyrus ENSPVAG00000015135 I 0.959
Mex3c Rattus norvegicus ENSRNOG00000015777 I 0.959
D3ZFL6_RAT Rattus norvegicus ENSRNOG00000025142 I 0.826
Mex3d Rattus norvegicus ENSRNOG00000030830 I 0.893
MEX3A Sorex araneus ENSSARG00000009868 N 0.736
MEX3C Sorex araneus ENSSARG00000006940 I 0.793
MEX3B Sorex araneus ENSSARG00000006007 I 0.818
XP_001175528.1 Strongylocentrotus purpuratus XP_001175528.1 I 0.909
XP_786425.2 Strongylocentrotus purpuratus XP_786425.2 I 0.909
MEX3A Taeniopygia guttata ENSTGUG00000003692 N 0.746
MEX3D Taeniopygia guttata ENSTGUG00000000201 I 0.910
MEX3C Takifugu rubripes ENSTRUG00000011888 I 0.950
MEX3D Takifugu rubripes ENSTRUG00000007986 I 0.902
MEX3B Takifugu rubripes ENSTRUG00000000367 I 1.000
MEX3A Takifugu rubripes ENSTRUG00000007796 N 0.713
MEX3D Tetraodon nigroviridis ENSTNIG00000015325 I 0.902
MEX3A Tetraodon nigroviridis ENSTNIG00000004473 N 0.713
e_gw1.3.1475.1 Trichoplax adhaerens e_gw1.3.1475.1 I 0.730
MEX3C Tupaia belangeri ENSTBEG00000014438 I 0.793
MEX3D Tursiops truncatus ENSTTRG00000008132 I 0.893
MEX3C Tursiops truncatus ENSTTRG00000004570 I 0.959
MEX3A Tursiops truncatus ENSTTRG00000013346 I 0.869
MEX3C Vicugna pacos ENSVPAG00000003137 I 0.793
BAH79688 Xenopus laevis BAH79688 I 0.967
AAI42552 Xenopus laevis AAI42552 I 0.885
AAI33220 Xenopus laevis AAI33220 I 0.877
AAI30196 Xenopus laevis AAI30196 I 0.893
AAI30114 Xenopus laevis AAI30114 I 0.877
AAI30070 Xenopus laevis AAI30070 I 0.967
AAI28670 Xenopus laevis AAI28670 I 0.950
A1L3F4 Xenopus laevis A1L3F4 I 0.967
mex3c Xenopus tropicalis ENSXETG00000022367 I 0.950
mex3a Xenopus tropicalis ENSXETG00000012704 N 0.738