RBM42 (Procavia capensis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSPCAG00000013053 T40394_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBM42
M142_0.6 		Homo sapiens AACUAMG RNAcompete
Ray et al.(2013)
RNCMPT00151 		1.000
ENSXETG00000017599
M237_0.6 		Xenopus tropicalis WACUAC RNAcompete
Ray et al.(2013)
RNCMPT00282 		0.958
CG2931
M138_0.6 		Drosophila melanogaster DACUAAG RNAcompete
Ray et al.(2013)
RNCMPT00147 		0.704
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPCAP00000012187 RRM 378 448

Links

Other RRM family RBPs
Other Procavia capensis RBPs

110 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PK10508.1 Cannabis sativa PK10508.1 N 0.000
Glyma11g13490.1 Glycine max Glyma11g13490.1 N 0.000
Glyma12g05490.1 Glycine max Glyma12g05490.1 N 0.000
Glyma13g42060.1 Glycine max Glyma13g42060.1 N 0.000
MDP0000252655 Malus x domestica MDP0000252655 N 0.000
MDP0000252696 Malus x domestica MDP0000252696 N 0.000
ppa000835m Prunus persica ppa000835m N 0.000
29577.m000447 Ricinus communis 29577.m000447 N 0.000