GRMZM2G069816 (Zea mays)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 GRMZM2G069816 T54074_0.6 MaizeSequence (2009-Oct-16)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G069816_P01 RRM 119 186
GRMZM2G069816_P01 RRM 216 284

Links

Other RRM family RBPs
Other Zea mays RBPs

63 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002877626.1 Arabidopsis lyrata fgenesh2_kg.5__1290__AT3G49390.2 N 0.000
XM_002872481.1 Arabidopsis lyrata fgenesh2_kg.6__3042__AT4G10610.1 N 0.708
XM_002882834.1 Arabidopsis lyrata fgenesh2_kg.3__1570__AT3G14450.1 N 0.708
XM_002893696.1 Arabidopsis lyrata fgenesh2_kg.1__3419__AT1G32790.2 N 0.766
XM_002874153.1 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6001957 N 0.000
XM_002894411.1 Arabidopsis lyrata Al_scaffold_0001_4812 N 0.000
CID8 Arabidopsis thaliana AT1G53650-TAIR-G N 0.000
CID9 Arabidopsis thaliana AT3G14450-TAIR-G N 0.701
CID10 Arabidopsis thaliana AT3G49390-TAIR-G N 0.000
ATRBP37 Arabidopsis thaliana AT4G10610-TAIR-G N 0.723
CID13 Arabidopsis thaliana AT5G24440-TAIR-G N 0.000
CID11 Arabidopsis thaliana AT1G32790-TAIR-G N 0.766
BRADI3G13740 Brachypodium distachyon BRADI3G13740 N 0.723
BRADI3G09250 Brachypodium distachyon BRADI3G09250 N 0.730
BRADI2G06650 Brachypodium distachyon BRADI2G06650 N 0.927
BRADI1G39150 Brachypodium distachyon BRADI1G39150 N 0.752
PK04894.1 Cannabis sativa PK04894.1 N 0.730
PK28889.1 Cannabis sativa PK28889.1 N 0.774
PK12463.1 Cannabis sativa PK12463.1 N 0.766
Cucsa.273320 Cucumis sativus Cucsa.273320 N 0.745
Glyma06g14030.1 Glycine max Glyma06g14030.1 N 0.723
Glyma15g40060.1 Glycine max Glyma15g40060.1 N 0.774
Glyma08g18810.1 Glycine max Glyma08g18810.1 N 0.766
Glyma04g40760.1 Glycine max Glyma04g40760.1 N 0.708
Glyma06g14050.1 Glycine max Glyma06g14050.1 N 0.708
Glyma04g40750.1 Glycine max Glyma04g40750.1 N 0.708
chr3.LjT02L14.110.nd Lotus japonicus chr3.LjT02L14.110.nd N 0.000
chr3.CM0059.50.nd Lotus japonicus chr3.CM0059.50.nd N 0.752
LjT41H24.20.nd Lotus japonicus LjT41H24.20.nd N 0.000
MDP0000233630 Malus x domestica MDP0000233630 N 0.730
MDP0000223003 Malus x domestica MDP0000223003 N 0.000
cassava41363.m1 Manihot esculenta cassava41363.m1 N 0.745
cassava41364.m1 Manihot esculenta cassava41364.m1 N 0.745
cassava43127.valid.m1 Manihot esculenta cassava43127.valid.m1 N 0.759
cassava38065.valid.m1 Manihot esculenta cassava38065.valid.m1 N 0.745
cassava38064.valid.m1 Manihot esculenta cassava38064.valid.m1 N 0.745
cassava37979.valid.m1 Manihot esculenta cassava37979.valid.m1 N 0.745
cassava38063.valid.m1 Manihot esculenta cassava38063.valid.m1 N 0.745
cassava23841.valid.m1 Manihot esculenta cassava23841.valid.m1 N 0.745
cassava45236.m1 Manihot esculenta cassava45236.m1 N 0.000
cassava37978.valid.m1 Manihot esculenta cassava37978.valid.m1 N 0.745
Medtr3g122920 Medicago truncatula Medtr3g122920 N 0.701
Medtr3g122880 Medicago truncatula Medtr3g122880 N 0.000
mgf005336m Mimulus guttatus mgf005336m N 0.000
mgf014445m Mimulus guttatus mgf014445m N 0.000
mgf013366m Mimulus guttatus mgf013366m N 0.737
mgf012896m Mimulus guttatus mgf012896m N 0.737
BGIOSIBCE022210 Oryza indica BGIOSIBCE022210 N 0.701
BGIOSIBCE026288 Oryza indica BGIOSIBCE026288 N 0.745
BGIOSIBCE006292 Oryza indica BGIOSIBCE006292 N 0.745
LOC_Os01g11120 Oryza sativa LOC_Os01g11120 N 0.927
LOC_Os02g14760 Oryza sativa LOC_Os02g14760 N 0.745
LOC_Os08g02330 Oryza sativa LOC_Os08g02330 N 0.745
LOC_Os06g35030 Oryza sativa LOC_Os06g35030 N 0.723
PDK_20s1822231g001 Phoenix dactylifera PDK_20s1822231g001 N 0.796
estExt_Genewise1.C_1960042 Physcomitrella patens estExt_Genewise1.C_1960042 N 0.745
e_gw1.62.48.1 Physcomitrella patens e_gw1.62.48.1 N 0.745
POPTR_0012s02890 Populus trichocarpa POPTR_0012s02890 N 0.000
B9IDI5_POPTR Populus trichocarpa POPTR_0015s00770 N 0.000
B9GIT2_POPTR Populus trichocarpa POPTR_0001s45290 N 0.000
ppa009298m Prunus persica ppa009298m N 0.774
ppa006808m Prunus persica ppa006808m N 0.730
29485.m000140 Ricinus communis 29485.m000140 N 0.752
30068.m002593 Ricinus communis 30068.m002593 N 0.752
29650.m000268 Ricinus communis 29650.m000268 N 0.730
gw1.29.636.1 Selaginella moellendorfii gw1.29.636.1 N 0.745
gw1.10.957.1 Selaginella moellendorfii gw1.10.957.1 N 0.745
SB10G021290 Sorghum bicolor Sb10g021290 N 0.730
SB07G001560 Sorghum bicolor Sb07g001560 N 0.752
Sb04g008740 Sorghum bicolor Sb04g008740 N 0.730
SB03G002180 Sorghum bicolor Sb03g002180 N 0.993
GSVIVG00001961001 Vitis vinifera GSVIVG00001961001 N 0.759
GSVIVG00019674001 Vitis vinifera GSVIVG00019674001 N 0.730
GSVIVG00038633001 Vitis vinifera GSVIVG00038633001 N 0.745
GRMZM2G173428 Zea mays GRMZM2G173428 N 0.752
GRMZM2G118590 Zea mays GRMZM2G118590 N 0.723
GRMZM2G069102 Zea mays GRMZM2G069102 N 0.737
GRMZM2G051043 Zea mays GRMZM2G051043 N 0.985
GRMZM2G029058 Zea mays GRMZM2G029058 N 0.737
GRMZM2G349794 Zea mays GRMZM2G349794 N 0.000