gw1.13.802.1 (Selaginella moellendorfii)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 gw1.13.802.1 T53108_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
gw1.84.45.1
M198_0.6 		Physcomitrella patens YUUUUUU RNAcompete
Ray et al.(2013)
RNCMPT00228 		0.834
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
gw1.13.802.1 RRM 57 123
gw1.13.802.1 RRM 142 212
gw1.13.802.1 RRM 274 340

Links

Other RRM family RBPs
Other Selaginella moellendorfii RBPs

41 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
gw1.84.45.1 Physcomitrella patens gw1.84.45.1 D 0.834
e_gw1.84.182.1 Physcomitrella patens e_gw1.84.182.1 I 0.820
ppa006248m Prunus persica ppa006248m I 0.741
MDP0000871411 Malus x domestica MDP0000871411 I 0.739
GSVIVG00015040001 Vitis vinifera GSVIVG00015040001 I 0.739
Cucsa.117430 Cucumis sativus Cucsa.117430 I 0.734
mgf001763m Mimulus guttatus mgf001763m I 0.734
ppa006419m Prunus persica ppa006419m I 0.729
GSVIVG00035575001 Vitis vinifera GSVIVG00035575001 I 0.722
B9NA29_POPTR Populus trichocarpa POPTR_0018s04060 I 0.722
cassava31597.valid.m1 Manihot esculenta cassava31597.valid.m1 I 0.721
cassava31598.valid.m1 Manihot esculenta cassava31598.valid.m1 I 0.721
cassava31596.valid.m1 Manihot esculenta cassava31596.valid.m1 I 0.721
cassava34810.m1 Manihot esculenta cassava34810.m1 I 0.721
29739.m003726 Ricinus communis 29739.m003726 I 0.720
POPTR_0006s14150 Populus trichocarpa POPTR_0006s14150 I 0.720
Medtr3g133100 Medicago truncatula Medtr3g133100 I 0.717
chr1.LjT36G06.30.nc Lotus japonicus chr1.LjT36G06.30.nc I 0.717
cassava2731.m1 Manihot esculenta cassava2731.m1 I 0.716
cassava2732.m1 Manihot esculenta cassava2732.m1 I 0.716
cassava2734.m1 Manihot esculenta cassava2734.m1 I 0.716
cassava128.valid.m1 Manihot esculenta cassava128.valid.m1 I 0.716
cassava2735.m1 Manihot esculenta cassava2735.m1 I 0.716
cassava2733.m1 Manihot esculenta cassava2733.m1 I 0.716
cassava129.valid.m1 Manihot esculenta cassava129.valid.m1 I 0.716
cassava127.valid.m1 Manihot esculenta cassava127.valid.m1 I 0.716
Glyma13g17200.1 Glycine max Glyma13g17200.1 I 0.715
cassava19001.valid.m1 Manihot esculenta cassava19001.valid.m1 I 0.715
28226.m000878 Ricinus communis 28226.m000878 I 0.712
PK22818.1 Cannabis sativa PK22818.1 I 0.710
BRADI3G40460 Brachypodium distachyon BRADI3G40460 I 0.710
LOC_Os07g42380 Oryza sativa LOC_Os07g42380 N 0.710
Medtr8g025650 Medicago truncatula Medtr8g025650 I 0.707
B9GVQ6_POPTR Populus trichocarpa POPTR_0003s06680 I 0.707
B9N7F5_POPTR Populus trichocarpa POPTR_0001s16630 I 0.707
LOC_Os08g40880 Oryza sativa LOC_Os08g40880 N 0.705
Glyma07g04640.1 Glycine max Glyma07g04640.1 I 0.702
ppa006170m Prunus persica ppa006170m I 0.702
PK20770.1 Cannabis sativa PK20770.1 I 0.702
Cucsa.149440 Cucumis sativus Cucsa.149440 I 0.702
Medtr8g132790 Medicago truncatula Medtr8g132790 N 0.700