CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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How to cite
GE15854
(
Drosophila yakuba
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
FBgn0233416
T20043_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0260864
KH
139
188
FVKRRQRLIGPNGATLKSIELLTDCYVLVQGNTVSALGPYKGLQQVRDIV
Links
Other
KH
family RBPs
Other
Drosophila yakuba
RBPs
123 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AMAG_03225
Allomyces macrogynus
AMAG_03225
N
0.000
C_scaffold_44000026
Phytophthora ramorum
C_scaffold_44000026
N
0.000
gw1.198.122.1
Physcomitrella patens
gw1.198.122.1
N
0.000
MDP0000340057
Malus x domestica
MDP0000340057
N
0.000
ppa025985m
Prunus persica
ppa025985m
N
0.000