MDP0000191652 (Malus x domestica)
PUF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00806 (PUF) IPR001313 MDP0000191652 T25191_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
MDP0000191652 PUF 721 755
MDP0000191652 PUF 758 790
MDP0000191652 PUF 793 827
MDP0000191652 PUF 829 863
MDP0000191652 PUF 865 897
MDP0000191652 PUF 902 922
MDP0000191652 PUF 992 1026
MDP0000191652 PUF 1039 1068

Links

Other PUF family RBPs
Other Malus x domestica RBPs

63 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AB03863.1 Alternaria brassicicola AB03863.1 N 0.000
An08g00930 Aspergillus niger CADANGAG00006412 N 0.000
CPIJ002557 Culex quinquefasciatus CPIJ002557 N 0.000
CpipJ_CPIJ002557 Culex pipiens CpipJ_CPIJ002557 N 0.000
EAT87800.2 Phaeosphaeria nodorum EAT87800.2 N 0.000
GA18942-RA Drosophila pseudoobscura FBgn0078941 N 0.000
FVEG_02700 Fusarium verticillioides FVEG_02700 N 0.000
GSTUMT00003933001 Tuber melanosporum GSTUMT00003933001 N 0.000
LjT04A22.90.nc Lotus japonicus LjT04A22.90.nc N 0.000
nasonia_NCBI_hmm378444 Nasonia vitripennis nasonia_NCBI_hmm378444 N 0.000
NCU01017 Neurospora crassa NCU01017 N 0.000
PTRG_04194 Pyrenophora tritici repentis PTRG_04194 N 0.000
SNOG_05409 Stagonospora nodorum SNOG_05409 N 0.000