Q5ZLM1_CHICK (Gallus gallus)
YTH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF04146 (YTH) IPR007275 ENSGALG00000015505 T62037_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSGALP00000024954 YTH 461 551

Links

Other YTH family RBPs
Other Gallus gallus RBPs

160 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
152141 Helobdella robusta 152141 N 0.736
62837 Helobdella robusta 62837 N 0.736
AAEL005544 Aedes aegypti AAEL005544 N 0.714
AAH60445 Xenopus laevis AAH60445 N 0.923
AAH68959 Xenopus laevis AAH68959 N 0.857
AAH78013 Xenopus laevis AAH78013 N 0.868
AAH81017 Xenopus laevis AAH81017 N 0.978
AGAP003817 Anopheles gambiae AGAP003817 N 0.725
amel4_ncbi_hmm12284 Tribolium castaneum amel4_ncbi_hmm12284 N 0.714
amel4_ncbi_hmm12284 Apis mellifera amel4_ncbi_hmm12284 N 0.714
Ame_R001131 Ailuropoda melanoleuca Ame_R001131 N 0.901
Ame_R014316 Ailuropoda melanoleuca Ame_R014316 N 0.923
Ame_R018798 Ailuropoda melanoleuca Ame_R018798 N 0.989
Aqu1.220420 Amphimedon queenslandica Aqu1.220420 N 0.736
BGIBMGA007551 Bombyx mori BGIBMGA007551 N 0.736
CPIJ011115 Culex quinquefasciatus CPIJ011115 N 0.703
CPIJ011116 Culex quinquefasciatus CPIJ011116 N 0.703
CpipJ_CPIJ011115 Culex pipiens CpipJ_CPIJ011115 N 0.703
CpipJ_CPIJ011116 Culex pipiens CpipJ_CPIJ011116 N 0.703
DGIL_AUG5s6515g6t1 Acyrtosiphon pisum DGIL_AUG5s6515g6t1 N 0.747
ENSACAG00000005560 Anolis carolinensis ENSACAG00000005560 N 0.945
YTHDF2 Anolis carolinensis ENSACAG00000010846 N 0.912
ENSACAG00000016837 Anolis carolinensis ENSACAG00000016837 N 1.000
YTHDF1 Bos taurus ENSBTAG00000010383 N 0.901
YTHD2_BOVIN Bos taurus ENSBTAG00000015771 N 0.901
YTHDF3 Bos taurus ENSBTAG00000018557 N 0.989
ENSCAFG00000007215 Canis familiaris ENSCAFG00000007215 N 0.989
YTHDF2 Canis familiaris ENSCAFG00000011700 N 0.901
YTHDF1 Canis familiaris ENSCAFG00000012772 N 0.934
YTHDF2 Choloepus hoffmanni ENSCHOG00000000357 N 0.901
ENSCHOG00000010194 Choloepus hoffmanni ENSCHOG00000010194 N 0.989
ENSCING00000004166 Ciona intestinalis ENSCING00000004166 N 0.780
YTHDF3 Callithrix jacchus ENSCJAG00000009217 N 0.989
YTHDF2 Callithrix jacchus ENSCJAG00000009804 N 0.901
A6MKQ0_CALJA Callithrix jacchus ENSCJAG00000010056 N 0.923
ENSCPOG00000002961 Cavia porcellus ENSCPOG00000002961 N 0.989
YTHDF1 Cavia porcellus ENSCPOG00000010202 N 0.923
YTHDF2 Cavia porcellus ENSCPOG00000019907 N 0.901
ENSCSAVG00000010987 Ciona savignyi ENSCSAVG00000010987 N 0.769
yth2 Danio rerio ENSDARG00000014498 N 0.868
ythdf1 Danio rerio ENSDARG00000016447 N 0.890
ythdf3 Danio rerio ENSDARG00000057939 N 0.978
Ythdf1 Dipodomys ordii ENSDORG00000002879 N 0.912
Ythdf3 Dipodomys ordii ENSDORG00000014699 N 0.989
Ythdf2 Dipodomys ordii ENSDORG00000016564 N 0.901
LOC100060217 Equus caballus ENSECAG00000019475 N 0.934
LOC100070667 Equus caballus ENSECAG00000023108 N 0.901
YTHDF1 Erinaceus europaeus ENSEEUG00000007461 N 0.934
YTHDF2 Erinaceus europaeus ENSEEUG00000011398 N 0.901
ENSETEG00000007144 Echinops telfairi ENSETEG00000007144 N 0.989
YTHDF2 Echinops telfairi ENSETEG00000017614 N 0.901
YTHDF2 Felis catus ENSFCAG00000012446 N 0.901
YTHDF1 Homo sapiens ENSG00000149658 N 0.912
ENSG00000185728 Homo sapiens ENSG00000185728 N 0.989
YTHDF2 Homo sapiens ENSG00000198492 N 0.901
ENSGACG00000002613 Gasterosteus aculeatus ENSGACG00000002613 N 0.890
ENSGACG00000002998 Gasterosteus aculeatus ENSGACG00000002998 N 0.934
YTHDF2 Gasterosteus aculeatus ENSGACG00000009603 N 0.868
ENSGACG00000012014 Gasterosteus aculeatus ENSGACG00000012014 N 0.879
LOC419583 Gallus gallus ENSGALG00000000959 N 0.912
Q5ZME7_CHICK Gallus gallus ENSGALG00000005745 N 0.945
LOC776373 Gallus gallus ENSGALG00000019473 N 1.000
YTHDF1 Gorilla gorilla ENSGGOG00000008340 N 0.912
YTHDF2 Gorilla gorilla ENSGGOG00000024069 N 0.901
ENSGGOG00000027681 Gorilla gorilla ENSGGOG00000027681 N 0.989
YTHDF1 Loxodonta africana ENSLAFG00000008884 N 0.934
ENSLAFG00000016052 Loxodonta africana ENSLAFG00000016052 N 0.989
YTHDF2 Loxodonta africana ENSLAFG00000030451 N 0.901
ENSMEUG00000011285 Macropus eugenii ENSMEUG00000011285 N 1.000
YTHDF2 Macropus eugenii ENSMEUG00000016488 N 0.901
YTHDF2 Meleagris gallopavo ENSMGAG00000001610 N 0.912
ENSMGAG00000006139 Meleagris gallopavo ENSMGAG00000006139 N 0.945
ENSMGAG00000011168 Meleagris gallopavo ENSMGAG00000011168 N 1.000
YTHDF2 Microcebus murinus ENSMICG00000003729 N 0.901
ENSMICG00000009379 Microcebus murinus ENSMICG00000009379 N 0.989
YTHDF1 Myotis lucifugus ENSMLUG00000002241 N 0.934
ENSMLUG00000006541 Myotis lucifugus ENSMLUG00000006541 N 0.725
YTHDF2 Myotis lucifugus ENSMLUG00000012606 N 0.901
ENSMMUG00000006729 Macaca mulatta ENSMMUG00000006729 N 0.989
YTHDF1 Macaca mulatta ENSMMUG00000009227 N 0.923
YTHDF2 Macaca mulatta ENSMMUG00000011391 N 0.901
ENSMMUG00000029888 Macaca mulatta ENSMMUG00000029888 N 0.703
ENSMODG00000008255 Monodelphis domestica ENSMODG00000008255 N 1.000
YTHDF2 Monodelphis domestica ENSMODG00000010973 N 0.901
ENSMODG00000016842 Monodelphis domestica ENSMODG00000016842 N 0.934
Ythdf1 Mus musculus ENSMUSG00000038848 N 0.934
Ythdf2 Mus musculus ENSMUSG00000040025 N 0.901
Ythdf3 Mus musculus ENSMUSG00000047213 N 0.989
ENSOANG00000003723 Ornithorhynchus anatinus ENSOANG00000003723 N 0.945
ENSOANG00000005053 Ornithorhynchus anatinus ENSOANG00000005053 N 0.989
YTHDF2 Ornithorhynchus anatinus ENSOANG00000006124 N 0.879
ENSOCUG00000008723 Oryctolagus cuniculus ENSOCUG00000008723 N 0.989
YTHDF2 Oryctolagus cuniculus ENSOCUG00000010612 N 0.901
YTHDF1 Oryctolagus cuniculus ENSOCUG00000012780 N 0.923
YTHDF1 Otolemur garnettii ENSOGAG00000000480 N 0.912
YTHDF2 Otolemur garnettii ENSOGAG00000014648 N 0.901
YTHDF1 Ochotona princeps ENSOPRG00000001758 N 0.912
YTHDF2 Ochotona princeps ENSOPRG00000017111 N 0.901
ENSORLG00000008640 Oryzias latipes ENSORLG00000008640 N 0.934
ENSORLG00000009739 Oryzias latipes ENSORLG00000009739 N 0.890
YTHDF2 Oryzias latipes ENSORLG00000014323 N 0.868
ENSORLG00000014665 Oryzias latipes ENSORLG00000014665 N 0.879
YTHDF1 Procavia capensis ENSPCAG00000002452 N 0.934
YTHDF2 Procavia capensis ENSPCAG00000007587 N 0.901
ENSPCAG00000016282 Procavia capensis ENSPCAG00000016282 N 0.989
ENSPPYG00000011226 Pongo pygmaeus ENSPPYG00000011226 N 0.923
ENSPPYG00000018626 Pongo pygmaeus ENSPPYG00000018626 N 0.989
XR_023164.1 Pan troglodytes ENSPTRG00000000439 N 0.901
YTHDF1 Pan troglodytes ENSPTRG00000013730 N 0.912
XR_024462.1 Pan troglodytes ENSPTRG00000030993 N 0.989
ENSPVAG00000002740 Pteropus vampyrus ENSPVAG00000002740 N 0.989
YTHDF2 Pteropus vampyrus ENSPVAG00000017224 N 0.901
YTHDF1 Pteropus vampyrus ENSPVAG00000017568 N 0.923
Ythdf3 Rattus norvegicus ENSRNOG00000010084 N 0.989
Ythdf1 Rattus norvegicus ENSRNOG00000027015 N 0.934
YTHDF2 Sorex araneus ENSSARG00000001187 N 0.901
ENSSARG00000007626 Sorex araneus ENSSARG00000007626 N 0.989
ENSTBEG00000005747 Tupaia belangeri ENSTBEG00000005747 N 0.989
YTHDF1 Taeniopygia guttata ENSTGUG00000007565 N 0.945
YTHDF3 Taeniopygia guttata ENSTGUG00000011243 N 1.000
YTHDF2 Taeniopygia guttata ENSTGUG00000017347 N 0.901
ENSTNIG00000003975 Tetraodon nigroviridis ENSTNIG00000003975 N 0.890
ENSTNIG00000012490 Tetraodon nigroviridis ENSTNIG00000012490 N 0.846
ENSTNIG00000012698 Tetraodon nigroviridis ENSTNIG00000012698 N 0.923
YTHDF2 Tetraodon nigroviridis ENSTNIG00000017263 N 0.868
ENSTRUG00000004288 Takifugu rubripes ENSTRUG00000004288 N 0.879
ENSTRUG00000005049 Takifugu rubripes ENSTRUG00000005049 N 0.890
ENSTRUG00000007870 Takifugu rubripes ENSTRUG00000007870 N 0.945
YTHDF2 Takifugu rubripes ENSTRUG00000011923 N 0.868
YTHDF2 Tarsius syrichta ENSTSYG00000004178 N 0.901
ENSTSYG00000009117 Tarsius syrichta ENSTSYG00000009117 N 0.989
YTHDF1 Tursiops truncatus ENSTTRG00000001804 N 0.934
YTHDF2 Tursiops truncatus ENSTTRG00000013603 N 0.901
ENSTTRG00000014564 Tursiops truncatus ENSTTRG00000014564 N 0.989
ENSVPAG00000008104 Vicugna pacos ENSVPAG00000008104 N 0.989
ythdf2 Xenopus tropicalis ENSXETG00000020636 N 0.868
ythdf3 Xenopus tropicalis ENSXETG00000021659 N 0.989
ythdf1 Xenopus tropicalis ENSXETG00000027086 N 0.923
estExt_fgenesh1_pm.C_4090006 Capitella teleta estExt_fgenesh1_pm.C_4090006 N 0.780
e_gw.462.3.1 Branchiostoma floridae e_gw.462.3.1 N 0.813
e_gw.90.29.1 Nematostella vectensis e_gw.90.29.1 N 0.758
CG6422 Drosophila melanogaster FBgn0039261 N 0.703
GA19581-RA Drosophila pseudoobscura FBgn0079577 N 0.725
GF18592 Drosophila ananassae FBgn0095610 N 0.714
GG12295 Drosophila erecta FBgn0104586 N 0.714
GH22368 Drosophila grimshawi FBgn0129826 N 0.703
GL21952 Drosophila persimilis FBgn0159545 N 0.725
GM17761 Drosophila sechellia FBgn0172669 N 0.703
GD18245 Drosophila simulans FBgn0189779 N 0.703
GJ14120 Drosophila virilis FBgn0201338 N 0.703
GK12904 Drosophila willistoni FBgn0214913 N 0.725
GE10748 Drosophila yakuba FBgn0228591 N 0.714
nasonia_NCBI_hmm250744 Nasonia vitripennis nasonia_NCBI_hmm250744 N 0.703
PHUM167190 Pediculus humanus PHUM167190 N 0.736
Sjc_0086280 Schistosoma japonicum Sjc_0086280 N 0.725
Smp_040460 Schistosoma mansoni Smp_040460 N 0.736
XP_001187433.1 Strongylocentrotus purpuratus XP_001187433.1 N 0.791
XP_002156821.1 Hydra magnipapillata XP_002156821.1 N 0.758
XP_002161951.1 Hydra magnipapillata XP_002161951.1 N 0.758
XP_786921.2 Strongylocentrotus purpuratus XP_786921.2 N 0.791