YTHDF1 (Pteropus vampyrus)
YTH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF04146 (YTH) IPR007275 ENSPVAG00000017568 T62128_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPVAP00000016571 YTH 429 519

Links

Other YTH family RBPs
Other Pteropus vampyrus RBPs

158 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
152141 Helobdella robusta 152141 N 0.758
62837 Helobdella robusta 62837 N 0.736
AAH60445 Xenopus laevis AAH60445 N 0.956
AAH68959 Xenopus laevis AAH68959 N 0.868
AAH78013 Xenopus laevis AAH78013 N 0.879
AAH81017 Xenopus laevis AAH81017 N 0.912
AGAP003817 Anopheles gambiae AGAP003817 N 0.703
amel4_ncbi_hmm12284 Tribolium castaneum amel4_ncbi_hmm12284 N 0.714
amel4_ncbi_hmm12284 Apis mellifera amel4_ncbi_hmm12284 N 0.714
Ame_R001131 Ailuropoda melanoleuca Ame_R001131 N 0.912
Ame_R014316 Ailuropoda melanoleuca Ame_R014316 N 0.978
Ame_R018798 Ailuropoda melanoleuca Ame_R018798 N 0.912
Aqu1.220420 Amphimedon queenslandica Aqu1.220420 N 0.758
BGIBMGA007551 Bombyx mori BGIBMGA007551 N 0.725
CPIJ011115 Culex quinquefasciatus CPIJ011115 N 0.703
CPIJ011116 Culex quinquefasciatus CPIJ011116 N 0.703
CpipJ_CPIJ011115 Culex pipiens CpipJ_CPIJ011115 N 0.703
CpipJ_CPIJ011116 Culex pipiens CpipJ_CPIJ011116 N 0.703
DGIL_AUG5s6515g6t1 Acyrtosiphon pisum DGIL_AUG5s6515g6t1 N 0.758
ENSACAG00000005560 Anolis carolinensis ENSACAG00000005560 N 0.967
YTHDF2 Anolis carolinensis ENSACAG00000010846 N 0.901
ENSACAG00000016837 Anolis carolinensis ENSACAG00000016837 N 0.923
YTHDF1 Bos taurus ENSBTAG00000010383 N 0.956
YTHD2_BOVIN Bos taurus ENSBTAG00000015771 N 0.912
YTHDF3 Bos taurus ENSBTAG00000018557 N 0.912
ENSCAFG00000007215 Canis familiaris ENSCAFG00000007215 N 0.912
YTHDF2 Canis familiaris ENSCAFG00000011700 N 0.912
YTHDF1 Canis familiaris ENSCAFG00000012772 N 0.989
YTHDF2 Choloepus hoffmanni ENSCHOG00000000357 N 0.912
ENSCHOG00000010194 Choloepus hoffmanni ENSCHOG00000010194 N 0.912
ENSCING00000004166 Ciona intestinalis ENSCING00000004166 N 0.791
YTHDF3 Callithrix jacchus ENSCJAG00000009217 N 0.912
YTHDF2 Callithrix jacchus ENSCJAG00000009804 N 0.912
A6MKQ0_CALJA Callithrix jacchus ENSCJAG00000010056 N 0.978
ENSCPOG00000002961 Cavia porcellus ENSCPOG00000002961 N 0.912
YTHDF1 Cavia porcellus ENSCPOG00000010202 N 0.978
YTHDF2 Cavia porcellus ENSCPOG00000019907 N 0.912
ENSCSAVG00000010987 Ciona savignyi ENSCSAVG00000010987 N 0.780
yth2 Danio rerio ENSDARG00000014498 N 0.890
ythdf1 Danio rerio ENSDARG00000016447 N 0.923
ythdf3 Danio rerio ENSDARG00000057939 N 0.912
Ythdf1 Dipodomys ordii ENSDORG00000002879 N 0.967
Ythdf3 Dipodomys ordii ENSDORG00000014699 N 0.912
Ythdf2 Dipodomys ordii ENSDORG00000016564 N 0.912
LOC100060217 Equus caballus ENSECAG00000019475 N 0.989
LOC100070667 Equus caballus ENSECAG00000023108 N 0.912
YTHDF1 Erinaceus europaeus ENSEEUG00000007461 N 0.989
YTHDF2 Erinaceus europaeus ENSEEUG00000011398 N 0.912
ENSETEG00000007144 Echinops telfairi ENSETEG00000007144 N 0.912
YTHDF2 Echinops telfairi ENSETEG00000017614 N 0.912
YTHDF1 Echinops telfairi ENSETEG00000017860 N 0.714
YTHDF2 Felis catus ENSFCAG00000012446 N 0.912
YTHDF1 Homo sapiens ENSG00000149658 N 0.967
ENSG00000185728 Homo sapiens ENSG00000185728 N 0.912
YTHDF2 Homo sapiens ENSG00000198492 N 0.912
ENSGACG00000002613 Gasterosteus aculeatus ENSGACG00000002613 N 0.923
ENSGACG00000002998 Gasterosteus aculeatus ENSGACG00000002998 N 0.901
YTHDF2 Gasterosteus aculeatus ENSGACG00000009603 N 0.890
ENSGACG00000012014 Gasterosteus aculeatus ENSGACG00000012014 N 0.923
LOC419583 Gallus gallus ENSGALG00000000959 N 0.901
Q5ZME7_CHICK Gallus gallus ENSGALG00000005745 N 0.978
Q5ZLM1_CHICK Gallus gallus ENSGALG00000015505 N 0.923
LOC776373 Gallus gallus ENSGALG00000019473 N 0.923
YTHDF1 Gorilla gorilla ENSGGOG00000008340 N 0.967
YTHDF2 Gorilla gorilla ENSGGOG00000024069 N 0.912
ENSGGOG00000027681 Gorilla gorilla ENSGGOG00000027681 N 0.912
YTHDF1 Loxodonta africana ENSLAFG00000008884 N 0.989
ENSLAFG00000016052 Loxodonta africana ENSLAFG00000016052 N 0.912
YTHDF2 Loxodonta africana ENSLAFG00000030451 N 0.912
ENSMEUG00000011285 Macropus eugenii ENSMEUG00000011285 N 0.923
YTHDF2 Macropus eugenii ENSMEUG00000016488 N 0.912
YTHDF2 Meleagris gallopavo ENSMGAG00000001610 N 0.901
ENSMGAG00000006139 Meleagris gallopavo ENSMGAG00000006139 N 0.978
ENSMGAG00000011168 Meleagris gallopavo ENSMGAG00000011168 N 0.923
YTHDF2 Microcebus murinus ENSMICG00000003729 N 0.912
ENSMICG00000009379 Microcebus murinus ENSMICG00000009379 N 0.912
YTHDF1 Myotis lucifugus ENSMLUG00000002241 N 0.989
YTHDF2 Myotis lucifugus ENSMLUG00000012606 N 0.912
ENSMMUG00000006729 Macaca mulatta ENSMMUG00000006729 N 0.912
YTHDF1 Macaca mulatta ENSMMUG00000009227 N 0.978
YTHDF2 Macaca mulatta ENSMMUG00000011391 N 0.912
ENSMMUG00000029888 Macaca mulatta ENSMMUG00000029888 N 0.725
ENSMODG00000008255 Monodelphis domestica ENSMODG00000008255 N 0.923
YTHDF2 Monodelphis domestica ENSMODG00000010973 N 0.912
ENSMODG00000016842 Monodelphis domestica ENSMODG00000016842 N 0.967
Ythdf1 Mus musculus ENSMUSG00000038848 N 0.989
Ythdf2 Mus musculus ENSMUSG00000040025 N 0.912
Ythdf3 Mus musculus ENSMUSG00000047213 N 0.912
ENSOANG00000003723 Ornithorhynchus anatinus ENSOANG00000003723 N 0.978
ENSOANG00000005053 Ornithorhynchus anatinus ENSOANG00000005053 N 0.912
YTHDF2 Ornithorhynchus anatinus ENSOANG00000006124 N 0.890
ENSOCUG00000008723 Oryctolagus cuniculus ENSOCUG00000008723 N 0.912
YTHDF2 Oryctolagus cuniculus ENSOCUG00000010612 N 0.912
YTHDF1 Oryctolagus cuniculus ENSOCUG00000012780 N 0.956
YTHDF1 Otolemur garnettii ENSOGAG00000000480 N 0.967
YTHDF2 Otolemur garnettii ENSOGAG00000014648 N 0.912
YTHDF1 Ochotona princeps ENSOPRG00000001758 N 0.967
YTHDF2 Ochotona princeps ENSOPRG00000017111 N 0.912
ENSORLG00000008640 Oryzias latipes ENSORLG00000008640 N 0.879
ENSORLG00000009739 Oryzias latipes ENSORLG00000009739 N 0.923
YTHDF2 Oryzias latipes ENSORLG00000014323 N 0.890
ENSORLG00000014665 Oryzias latipes ENSORLG00000014665 N 0.912
YTHDF1 Procavia capensis ENSPCAG00000002452 N 0.989
YTHDF2 Procavia capensis ENSPCAG00000007587 N 0.912
ENSPCAG00000016282 Procavia capensis ENSPCAG00000016282 N 0.912
ENSPPYG00000011226 Pongo pygmaeus ENSPPYG00000011226 N 0.978
ENSPPYG00000018626 Pongo pygmaeus ENSPPYG00000018626 N 0.912
XR_023164.1 Pan troglodytes ENSPTRG00000000439 N 0.912
YTHDF1 Pan troglodytes ENSPTRG00000013730 N 0.967
XR_024462.1 Pan troglodytes ENSPTRG00000030993 N 0.912
ENSPVAG00000002740 Pteropus vampyrus ENSPVAG00000002740 N 0.912
YTHDF2 Pteropus vampyrus ENSPVAG00000017224 N 0.912
Ythdf3 Rattus norvegicus ENSRNOG00000010084 N 0.912
Ythdf1 Rattus norvegicus ENSRNOG00000027015 N 0.989
YTHDF2 Sorex araneus ENSSARG00000001187 N 0.912
ENSSARG00000007626 Sorex araneus ENSSARG00000007626 N 0.912
ENSTBEG00000005747 Tupaia belangeri ENSTBEG00000005747 N 0.912
YTHDF1 Taeniopygia guttata ENSTGUG00000007565 N 0.978
YTHDF3 Taeniopygia guttata ENSTGUG00000011243 N 0.923
YTHDF2 Taeniopygia guttata ENSTGUG00000017347 N 0.901
ENSTNIG00000003975 Tetraodon nigroviridis ENSTNIG00000003975 N 0.923
ENSTNIG00000012490 Tetraodon nigroviridis ENSTNIG00000012490 N 0.890
ENSTNIG00000012698 Tetraodon nigroviridis ENSTNIG00000012698 N 0.901
YTHDF2 Tetraodon nigroviridis ENSTNIG00000017263 N 0.879
ENSTRUG00000004288 Takifugu rubripes ENSTRUG00000004288 N 0.923
ENSTRUG00000005049 Takifugu rubripes ENSTRUG00000005049 N 0.923
ENSTRUG00000007870 Takifugu rubripes ENSTRUG00000007870 N 0.912
YTHDF2 Takifugu rubripes ENSTRUG00000011923 N 0.890
YTHDF2 Tarsius syrichta ENSTSYG00000004178 N 0.912
ENSTSYG00000009117 Tarsius syrichta ENSTSYG00000009117 N 0.912
YTHDF1 Tursiops truncatus ENSTTRG00000001804 N 0.989
YTHDF2 Tursiops truncatus ENSTTRG00000013603 N 0.912
ENSTTRG00000014564 Tursiops truncatus ENSTTRG00000014564 N 0.912
ENSVPAG00000008104 Vicugna pacos ENSVPAG00000008104 N 0.912
ythdf2 Xenopus tropicalis ENSXETG00000020636 N 0.879
ythdf3 Xenopus tropicalis ENSXETG00000021659 N 0.912
ythdf1 Xenopus tropicalis ENSXETG00000027086 N 0.956
estExt_fgenesh1_pm.C_4090006 Capitella teleta estExt_fgenesh1_pm.C_4090006 N 0.769
e_gw.462.3.1 Branchiostoma floridae e_gw.462.3.1 N 0.791
e_gw.90.29.1 Nematostella vectensis e_gw.90.29.1 N 0.769
CG6422 Drosophila melanogaster FBgn0039261 N 0.714
GA19581-RA Drosophila pseudoobscura FBgn0079577 N 0.725
GF18592 Drosophila ananassae FBgn0095610 N 0.714
GG12295 Drosophila erecta FBgn0104586 N 0.714
GH22368 Drosophila grimshawi FBgn0129826 N 0.703
GL21952 Drosophila persimilis FBgn0159545 N 0.725
GM17761 Drosophila sechellia FBgn0172669 N 0.714
GD18245 Drosophila simulans FBgn0189779 N 0.714
GJ14120 Drosophila virilis FBgn0201338 N 0.703
GK12904 Drosophila willistoni FBgn0214913 N 0.725
GE10748 Drosophila yakuba FBgn0228591 N 0.714
nasonia_NCBI_hmm250744 Nasonia vitripennis nasonia_NCBI_hmm250744 N 0.714
PHUM167190 Pediculus humanus PHUM167190 N 0.747
Smp_040460 Schistosoma mansoni Smp_040460 N 0.703
XP_001187433.1 Strongylocentrotus purpuratus XP_001187433.1 N 0.780
XP_002156821.1 Hydra magnipapillata XP_002156821.1 N 0.747
XP_002161951.1 Hydra magnipapillata XP_002161951.1 N 0.747
XP_786921.2 Strongylocentrotus purpuratus XP_786921.2 N 0.780