GSVIVG00019958001 (Vitis vinifera)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 GSVIVG00019958001 T20096_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GSVIVT00019958001 KH 110 166
GSVIVT00019958001 KH 207 274
GSVIVT00019958001 KH 321 375
GSVIVT00019958001 KH 406 473

Links

Other KH family RBPs
Other Vitis vinifera RBPs

37 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
29813.m001513 Ricinus communis 29813.m001513 N 0.852
A9PE42_POPTR Populus trichocarpa POPTR_0017s12170 N 0.763
AT1G14170 Arabidopsis thaliana AT1G14170-TAIR-G N 0.706
B9H0D1_POPTR Populus trichocarpa POPTR_0004s12220 N 0.735
B9HI86_POPTR Populus trichocarpa POPTR_0008s08810 N 0.833
B9HXY8_POPTR Populus trichocarpa POPTR_0010s17430 N 0.829
BRADI1G61230 Brachypodium distachyon BRADI1G61230 N 0.723
BRADI1G61240 Brachypodium distachyon BRADI1G61240 N 0.715
cassava12022.valid.m1 Manihot esculenta cassava12022.valid.m1 N 0.861
cassava12023.valid.m1 Manihot esculenta cassava12023.valid.m1 N 0.861
cassava42739.valid.m1 Manihot esculenta cassava42739.valid.m1 N 0.793
cassava42740.valid.m1 Manihot esculenta cassava42740.valid.m1 N 0.793
cassava42741.valid.m1 Manihot esculenta cassava42741.valid.m1 N 0.793
cassava42742.valid.m1 Manihot esculenta cassava42742.valid.m1 N 0.793
chr1.CM0141.280.nc Lotus japonicus chr1.CM0141.280.nc N 0.776
Cucsa.158200 Cucumis sativus Cucsa.158200 N 0.750
Glyma09g37070.1 Glycine max Glyma09g37070.1 N 0.760
Glyma13g05520.1 Glycine max Glyma13g05520.1 N 0.733
Glyma18g49600.1 Glycine max Glyma18g49600.1 N 0.767
Glyma19g02840.1 Glycine max Glyma19g02840.1 N 0.766
GRMZM2G084540 Zea mays GRMZM2G084540 N 0.742
GRMZM2G126120 Zea mays GRMZM2G126120 N 0.722
GSVIVG00011439001 Vitis vinifera GSVIVG00011439001 N 0.813
LjSGA_002278.2 Lotus japonicus LjSGA_002278.2 N 0.753
LOC_Os03g25970 Oryza sativa LOC_Os03g25970 N 0.725
MDP0000573228 Malus x domestica MDP0000573228 N 0.773
Medtr6g013130 Medicago truncatula Medtr6g013130 N 0.763
Medtr7g010360 Medicago truncatula Medtr7g010360 N 0.754
mgf007265m Mimulus guttatus mgf007265m N 0.778
mgf008188m Mimulus guttatus mgf008188m N 0.734
mgf010659m Mimulus guttatus mgf010659m N 0.734
mgf011898m Mimulus guttatus mgf011898m N 0.778
PDK_20s1316613g001 Phoenix dactylifera PDK_20s1316613g001 N 0.715
PK16782.1 Cannabis sativa PK16782.1 N 0.776
ppa003758m Prunus persica ppa003758m N 0.766
Sb01g034070 Sorghum bicolor Sb01g034070 N 0.726
XM_002892746.1 Arabidopsis lyrata fgenesh2_kg.1__1532__AT1G14170.3 N 0.718