AGAP004592 (Anopheles gambiae)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 AGAP004592 T32501_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
B52
M334_0.6 		Drosophila melanogaster GRUCAACCNGGCGACMG SELEX
Cook et al.(2011)
802_9111335 		0.961
B52
M126_0.6 		Drosophila melanogaster GGASGRV RNAcompete
Ray et al.(2013)
RNCMPT00134 		0.961
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
AGAP004592-PA RRM 6 68
AGAP004592-PA RRM 114 179
AGAP004592-PB RRM 6 68
AGAP004592-PC RRM 6 68
AGAP004592-PD RRM 6 68
AGAP004592-PE RRM 6 68
AGAP004592-PE RRM 120 185
AGAP004592-PF RRM 6 68
AGAP004592-PG RRM 6 68
AGAP004592-PH RRM 6 68
AGAP004592-PH RRM 114 179
AGAP004592-PI RRM 1 48

Links

Other RRM family RBPs
Other Anopheles gambiae RBPs

135 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
186191 Helobdella robusta 186191 I 0.000
AAEL002980 Aedes aegypti AAEL002980 I 0.000
AAEL014167 Aedes aegypti AAEL014167 I 0.000
AAH44979 Xenopus laevis AAH44979 I 0.000
AAH72799 Xenopus laevis AAH72799 I 0.000
AAH84107 Xenopus laevis AAH84107 I 0.000
AGAP011637 Anopheles gambiae AGAP011637 I 0.000
amel4_ncbi_hmm2739 Apis mellifera amel4_ncbi_hmm2739 I 0.000
Ame_R012098 Ailuropoda melanoleuca Ame_R012098 I 0.000
Ame_R017767 Ailuropoda melanoleuca Ame_R017767 I 0.000
BGIBMGA012118 Bombyx mori BGIBMGA012118 I 0.000
CAA41021 Xenopus laevis CAA41021 I 0.000
CPIJ019134 Culex quinquefasciatus CPIJ019134 I 0.000
CpipJ_CPIJ019134 Culex pipiens CpipJ_CPIJ019134 I 0.000
DGIL_AUG5s14106g2t1 Acyrtosiphon pisum DGIL_AUG5s14106g2t1 I 0.000
ENSCING00000009501 Ciona intestinalis ENSCING00000009501 I 0.000
ENSCJAG00000014865 Callithrix jacchus ENSCJAG00000014865 I 0.000
ENSCSAVG00000000396 Ciona savignyi ENSCSAVG00000000396 I 0.000
ENSDORG00000006711 Dipodomys ordii ENSDORG00000006711 I 0.000
ENSPPYG00000010002 Pongo pygmaeus ENSPPYG00000010002 I 0.000
ENSPPYG00000010723 Pongo pygmaeus ENSPPYG00000010723 I 0.000
ENSTGUG00000014863 Taeniopygia guttata ENSTGUG00000014863 N 0.000
ENSTGUG00000016203 Taeniopygia guttata ENSTGUG00000016203 I 0.000
estExt_fgenesh2_pg.C_1420076 Branchiostoma floridae estExt_fgenesh2_pg.C_1420076 I 0.000
estExt_fgenesh2_pg.C_3980007 Branchiostoma floridae estExt_fgenesh2_pg.C_3980007 I 0.000
estExt_Genewise1Plus.C_1950032 Capitella teleta estExt_Genewise1Plus.C_1950032 I 0.000
e_gw.11.168.1 Nematostella vectensis e_gw.11.168.1 I 0.000
e_gw1.1.761.1 Trichoplax adhaerens e_gw1.1.761.1 I 0.000
e_gw1.38.145.1 Lottia gigantea e_gw1.38.145.1 I 0.000
GA18235-RA Drosophila pseudoobscura FBgn0078242 I 0.000
GE16390 Drosophila yakuba FBgn0233919 I 0.000
GF21334 Drosophila ananassae FBgn0098336 I 0.000
GG18748 Drosophila erecta FBgn0110957 I 0.000
GH24608 Drosophila grimshawi FBgn0132064 I 0.000
GJ16850 Drosophila virilis FBgn0204029 I 0.000
GK25839 Drosophila willistoni FBgn0227798 I 0.000
GL14287 Drosophila persimilis FBgn0151892 I 0.000
GM12396 Drosophila sechellia FBgn0167333 I 0.000
LOC100050830 Equus caballus ENSECAG00000018407 I 0.000
LOC100068274 Equus caballus ENSECAG00000013141 I 0.000
LOC100394904 Callithrix jacchus ENSCJAG00000022477 I 0.000
LOC100407601 Callithrix jacchus ENSCJAG00000023308 I 0.000
LOC100408625 Callithrix jacchus ENSCJAG00000004811 I 0.000
LOC100410790 Callithrix jacchus ENSCJAG00000021962 I 0.000
LOC477148 Canis familiaris ENSCAFG00000005520 I 0.000
nasonia_NCBI_hmm682213 Nasonia vitripennis nasonia_NCBI_hmm682213 I 0.000
P45429 Xenopus laevis P45429 I 0.000
Q3T0M6_BOVIN Bos taurus ENSBTAG00000027506 I 0.000
snf Drosophila mojavensis FBgn0069598 I 0.000
snf Drosophila melanogaster FBgn0003449 D 0.000
SNRPA Pan troglodytes ENSPTRG00000011007 I 0.000
SNRPA Tetraodon nigroviridis ENSTNIG00000007732 I 0.000
SNRPA Pteropus vampyrus ENSPVAG00000001494 I 0.000
SNRPA Gasterosteus aculeatus ENSGACG00000009838 I 0.000
SNRPA Erinaceus europaeus ENSEEUG00000015149 I 0.000
SNRPA Sus scrofa ENSSSCG00000002998 I 0.000
SNRPA Ochotona princeps ENSOPRG00000002364 I 0.000
SNRPA Echinops telfairi ENSETEG00000019205 I 0.000
SNRPA Myotis lucifugus ENSMLUG00000000219 I 0.000
SNRPA Tupaia belangeri ENSTBEG00000012717 I 0.000
SNRPA Felis catus ENSFCAG00000016209 I 0.000
SNRPA Macaca mulatta ENSMMUG00000022024 I 0.000
snrpa Danio rerio ENSDARG00000018890 I 0.000
SNRPA Procavia capensis ENSPCAG00000012325 I 0.000
SNRPA Tursiops truncatus ENSTTRG00000007182 I 0.000
SNRPA Monodelphis domestica ENSMODG00000007912 I 0.000
SNRPA Anolis carolinensis ENSACAG00000013557 I 0.000
Snrpa Mus musculus ENSMUSG00000061479 I 0.000
Snrpa Rattus norvegicus ENSRNOG00000001501 I 0.000
SNRPA Oryctolagus cuniculus ENSOCUG00000024618 I 0.000
SNRPA Otolemur garnettii ENSOGAG00000002864 I 0.000
SNRPA Canis familiaris ENSCAFG00000005091 I 0.000
SNRPA Gorilla gorilla ENSGGOG00000001190 I 0.000
SNRPA Cavia porcellus ENSCPOG00000010875 I 0.000
SNRPA Oryzias latipes ENSORLG00000006536 I 0.000
SNRPA Takifugu rubripes ENSTRUG00000009703 I 0.000
SNRPA Homo sapiens ENSG00000077312 D 0.000
SNRPA_BOVIN Bos taurus ENSBTAG00000009077 I 0.000
SNRPB2 Echinops telfairi ENSETEG00000001085 I 0.000
SNRPB2 Loxodonta africana ENSLAFG00000008775 I 0.000
SNRPB2 Gorilla gorilla ENSGGOG00000003937 I 0.000
SNRPB2 Anolis carolinensis ENSACAG00000000582 I 0.000
SNRPB2 Cavia porcellus ENSCPOG00000005014 I 0.000
SNRPB2 Gallus gallus ENSGALG00000008729 I 0.000
SNRPB2 Vicugna pacos ENSVPAG00000004557 I 0.000
SNRPB2 Gasterosteus aculeatus ENSGACG00000019682 I 0.000
snrpb2 Danio rerio ENSDARG00000039424 I 0.000
SNRPB2 Dasypus novemcinctus ENSDNOG00000014137 N 0.000
SNRPB2 Homo sapiens ENSG00000125870 I 0.000
SNRPB2 Spermophilus tridecemlineatus ENSSTOG00000009198 I 0.000
snrpb2 Xenopus tropicalis ENSXETG00000003550 I 0.000
SNRPB2 Pan troglodytes ENSPTRG00000013271 I 0.000
SNRPB2 Myotis lucifugus ENSMLUG00000008163 I 0.000
SNRPB2 Oryzias latipes ENSORLG00000019421 I 0.000
SNRPB2 Ochotona princeps ENSOPRG00000011587 I 0.000
SNRPB2 Macaca mulatta ENSMMUG00000014493 I 0.000
SNRPB2 Otolemur garnettii ENSOGAG00000015146 I 0.000
SNRPB2 Oryctolagus cuniculus ENSOCUG00000001427 I 0.000
SNRPB2 Ornithorhynchus anatinus ENSOANG00000001237 I 0.000
Snrpb2 Mus musculus ENSMUSG00000008333 I 0.000
SNRPB2 Monodelphis domestica ENSMODG00000005392 I 0.000
SNRPB2 Pteropus vampyrus ENSPVAG00000016140 I 0.000
Snrpb2 Rattus norvegicus ENSRNOG00000004967 I 0.000
SNRPB2 Sorex araneus ENSSARG00000002681 I 0.000
SNRPB2 Macropus eugenii ENSMEUG00000016552 I 0.000
SNRPB2 Tursiops truncatus ENSTTRG00000006395 I 0.000
SNRPB2 Tarsius syrichta ENSTSYG00000008857 I 0.000
SNRPB2 Takifugu rubripes ENSTRUG00000009060 I 0.000
SNRPB2 Tetraodon nigroviridis ENSTNIG00000002735 I 0.000
SNRPB2 Meleagris gallopavo ENSMGAG00000006135 I 0.000
SNRPB2 Taeniopygia guttata ENSTGUG00000002415 I 0.000
SNRPB2 Tupaia belangeri ENSTBEG00000012892 I 0.000
SNRPB2 Sus scrofa ENSSSCG00000007081 I 0.000
SNRPB2 Microcebus murinus ENSMICG00000015404 I 0.000
SPA_estExt_Genewise1Plus.C_890021 Daphnia pulex SPA_estExt_Genewise1Plus.C_890021 I 0.000