AGAP004592 (Anopheles gambiae)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 AGAP004592 T32501_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
B52
M334_0.6 		Drosophila melanogaster GRUCAACCNGGCGACMG SELEX
Cook et al.(2011)
802_9111335 		0.961
B52
M126_0.6 		Drosophila melanogaster GGASGRV RNAcompete
Ray et al.(2013)
RNCMPT00134 		0.961
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
AGAP004592-PA RRM 6 68
AGAP004592-PA RRM 114 179
AGAP004592-PB RRM 6 68
AGAP004592-PC RRM 6 68
AGAP004592-PD RRM 6 68
AGAP004592-PE RRM 6 68
AGAP004592-PE RRM 120 185
AGAP004592-PF RRM 6 68
AGAP004592-PG RRM 6 68
AGAP004592-PH RRM 6 68
AGAP004592-PH RRM 114 179
AGAP004592-PI RRM 1 48

Links

Other RRM family RBPs
Other Anopheles gambiae RBPs

135 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
62194 Helobdella robusta 62194 I 0.705
A6H7B7_BOVIN Bos taurus ENSBTAG00000011596 I 0.705
A6MLI3_CALJA Callithrix jacchus ENSCJAG00000014884 I 0.705
A7MB38_BOVIN Bos taurus ENSBTAG00000013309 I 0.760
AAEL012621 Aedes aegypti AAEL012621 I 0.845
AAH44265 Xenopus laevis AAH44265 I 0.744
AAH46668 Xenopus laevis AAH46668 I 0.767
amel4_ncbi_hmm6583 Apis mellifera amel4_ncbi_hmm6583 I 0.891
Ame_R004936 Ailuropoda melanoleuca Ame_R004936 I 0.705
Ame_R018370 Ailuropoda melanoleuca Ame_R018370 I 0.760
Aqu1.218342 Amphimedon queenslandica Aqu1.218342 N 0.705
B52 Drosophila melanogaster FBgn0004587 D 1.000
BGIBMGA010178 Bombyx mori BGIBMGA010178 I 0.891
CPIJ008634 Culex quinquefasciatus CPIJ008634 I 0.977
CpipJ_CPIJ008634 Culex pipiens CpipJ_CPIJ008634 I 0.977
DGIL_AUG5s17730g6t1 Acyrtosiphon pisum DGIL_AUG5s17730g6t1 I 0.814
ENSACAG00000005544 Anolis carolinensis ENSACAG00000005544 I 0.729
ENSCING00000004873 Ciona intestinalis ENSCING00000004873 I 0.721
ENSCING00000012370 Ciona intestinalis ENSCING00000012370 I 0.721
ENSCSAVG00000002581 Ciona savignyi ENSCSAVG00000002581 I 0.721
ENSMGAG00000011888 Meleagris gallopavo ENSMGAG00000011888 I 0.721
ENSPPYG00000001629 Pongo pygmaeus ENSPPYG00000001629 I 0.760
ENSPPYG00000005945 Pongo pygmaeus ENSPPYG00000005945 I 0.705
ENSPPYG00000011019 Pongo pygmaeus ENSPPYG00000011019 I 0.744
estExt_fgenesh1_pg.C_3000025 Capitella teleta estExt_fgenesh1_pg.C_3000025 I 0.798
estExt_fgenesh2_pg.C_920027 Branchiostoma floridae estExt_fgenesh2_pg.C_920027 I 0.760
estExt_fgenesh2_pm.C_690014 Branchiostoma floridae estExt_fgenesh2_pm.C_690014 I 0.760
estExt_Genewise1Plus.C_150169 Daphnia pulex estExt_Genewise1Plus.C_150169 I 0.845
estExt_Genewise1Plus.C_1640045 Capitella teleta estExt_Genewise1Plus.C_1640045 I 0.829
estExt_Genewise1Plus.C_sca_890186 Lottia gigantea estExt_Genewise1Plus.C_sca_890186 I 0.721
e_gw1.89.27.1 Lottia gigantea e_gw1.89.27.1 I 0.744
fgenesh1_pm.scaffold_318000001 Nematostella vectensis fgenesh1_pm.scaffold_318000001 N 0.713
GA10599-RA Drosophila pseudoobscura FBgn0070656 I 0.953
GD18917 Drosophila simulans FBgn0190428 N 1.000
GD18918 Drosophila simulans FBgn0190429 N 0.938
GE26284 Drosophila yakuba FBgn0243315 N 1.000
GE26286 Drosophila yakuba FBgn0243317 N 0.938
GF17608 Drosophila ananassae FBgn0094626 I 0.961
GG19772 Drosophila erecta FBgn0111973 N 1.000
GG19774 Drosophila erecta FBgn0111975 N 0.938
GH18528 Drosophila grimshawi FBgn0125995 I 0.953
GI22065 Drosophila mojavensis FBgn0144794 I 0.953
GJ24113 Drosophila virilis FBgn0211197 I 0.953
GK13948 Drosophila willistoni FBgn0215954 I 0.961
GL23543 Drosophila persimilis FBgn0161133 I 0.953
GM24118 Drosophila sechellia FBgn0178982 N 1.000
GM24119 Drosophila sechellia FBgn0178983 N 0.938
ISCW002531 Ixodes scapularis ISCW002531 I 0.736
ISCW010321 Ixodes scapularis ISCW010321 I 0.806
ISCW010322 Ixodes scapularis ISCW010322 I 0.752
ISCW014220 Ixodes scapularis ISCW014220 I 0.721
LOC100053264 Equus caballus ENSECAG00000026873 I 0.705
LOC100402973 Callithrix jacchus ENSCJAG00000009971 I 0.760
nasonia_NCBI_hmm368623 Nasonia vitripennis nasonia_NCBI_hmm368623 I 0.822
nasonia_NCBI_hmm370623 Nasonia vitripennis nasonia_NCBI_hmm370623 I 0.822
PACS2 Takifugu rubripes ENSTRUG00000010740 I 0.705
PHUM290500 Pediculus humanus PHUM290500 I 0.837
Q5ZKT4_CHICK Gallus gallus ENSGALG00000009484 I 0.721
Sfrs4 Rattus norvegicus ENSRNOG00000010007 I 0.760
SFRS5 Taeniopygia guttata ENSTGUG00000011425 I 0.713
Sfrs5 Rattus norvegicus ENSRNOG00000005513 I 0.705
Sfrs6 Rattus norvegicus ENSRNOG00000006380 I 0.744
SFRS6 Taeniopygia guttata ENSTGUG00000003455 I 0.736
SFRS6_BOVIN Bos taurus ENSBTAG00000008527 I 0.752
Smp_036270 Schistosoma mansoni Smp_036270 N 0.708
SRSF4 Procavia capensis ENSPCAG00000009879 I 0.760
SRSF4 Ochotona princeps ENSOPRG00000010098 I 0.752
SRSF4 Tursiops truncatus ENSTTRG00000002572 I 0.760
SRSF4 Tetraodon nigroviridis ENSTNIG00000000115 I 0.744
SRSF4 Tetraodon nigroviridis ENSTNIG00000005573 I 0.744
SRSF4 Takifugu rubripes ENSTRUG00000011891 I 0.744
SRSF4 Tarsius syrichta ENSTSYG00000007903 I 0.752
SRSF4 Sus scrofa ENSSSCG00000003588 I 0.760
SRSF4 Loxodonta africana ENSLAFG00000002575 I 0.760
Srsf4 Mus musculus ENSMUSG00000028911 I 0.760
SRSF4 Myotis lucifugus ENSMLUG00000014770 I 0.729
SRSF4 Macaca mulatta ENSMMUG00000007110 I 0.760
SRSF4 Meleagris gallopavo ENSMGAG00000002400 I 0.760
SRSF4 Gasterosteus aculeatus ENSGACG00000002389 I 0.736
SRSF4 Homo sapiens ENSG00000116350 I 0.760
SRSF4 Oryctolagus cuniculus ENSOCUG00000001837 I 0.760
SRSF4 Erinaceus europaeus ENSEEUG00000008479 I 0.760
SRSF4 Oryzias latipes ENSORLG00000009430 I 0.736
SRSF4 Monodelphis domestica ENSMODG00000011052 I 0.760
Srsf4 Dipodomys ordii ENSDORG00000002459 I 0.760
SRSF4 Dasypus novemcinctus ENSDNOG00000000968 I 0.760
SRSF4 Pan troglodytes ENSPTRG00000000445 I 0.760
SRSF4 Cavia porcellus ENSCPOG00000007263 I 0.760
SRSF5 Canis familiaris ENSCAFG00000016589 I 0.705
SRSF5 Macaca mulatta ENSMMUG00000022407 I 0.705
SRSF5 Anolis carolinensis ENSACAG00000005143 I 0.713
SRSF5 Myotis lucifugus ENSMLUG00000011939 I 0.705
SRSF5 Cavia porcellus ENSCPOG00000005949 I 0.705
SRSF5 Homo sapiens ENSG00000100650 D 0.705
SRSF5 Felis catus ENSFCAG00000008848 I 0.705
SRSF5 Monodelphis domestica ENSMODG00000011362 I 0.713
SRSF5 Gorilla gorilla ENSGGOG00000016462 I 0.705
Srsf5 Mus musculus ENSMUSG00000021134 I 0.705
SRSF5 Pan troglodytes ENSPTRG00000006488 I 0.705
SRSF5 Sus scrofa ENSSSCG00000002312 I 0.705
SRSF5 Oryzias latipes ENSORLG00000009268 I 0.713
SRSF5 Oryctolagus cuniculus ENSOCUG00000009274 I 0.705
SRSF5 Ochotona princeps ENSOPRG00000008286 I 0.705
SRSF5 Otolemur garnettii ENSOGAG00000015122 I 0.705
srsf5 Xenopus tropicalis ENSXETG00000002211 I 0.705
SRSF5 Tarsius syrichta ENSTSYG00000007786 I 0.705
SRSF5 Vicugna pacos ENSVPAG00000006448 I 0.705
SRSF5 Tursiops truncatus ENSTTRG00000003318 I 0.705
srsf5a Danio rerio ENSDARG00000029818 I 0.705
SRSF6 Callithrix jacchus ENSCJAG00000017888 I 0.744
SRSF6 Erinaceus europaeus ENSEEUG00000002324 N 0.708
SRSF6 Monodelphis domestica ENSMODG00000003107 I 0.750
Srsf6 Dipodomys ordii ENSDORG00000001945 I 0.744
SRSF6 Dasypus novemcinctus ENSDNOG00000008410 I 0.744
SRSF6 Procavia capensis ENSPCAG00000010954 I 0.736
SRSF6 Macaca mulatta ENSMMUG00000006742 N 0.750
SRSF6 Anolis carolinensis ENSACAG00000002061 I 0.736
srsf6 Xenopus tropicalis ENSXETG00000025503 I 0.744
SRSF6 Pteropus vampyrus ENSPVAG00000015232 I 0.744
SRSF6 Echinops telfairi ENSETEG00000006221 I 0.729
SRSF6 Microcebus murinus ENSMICG00000008537 I 0.736
SRSF6 Takifugu rubripes ENSTRUG00000003244 I 0.744
SRSF6 Macropus eugenii ENSMEUG00000014615 I 0.736
Srsf6 Mus musculus ENSMUSG00000016921 I 0.744
SRSF6 Gorilla gorilla ENSGGOG00000009808 I 0.744
SRSF6 Gasterosteus aculeatus ENSGACG00000006084 I 0.736
SRSF6 Tetraodon nigroviridis ENSTNIG00000001692 I 0.736
SRSF6 Homo sapiens ENSG00000124193 I 0.744
SRSF6 Oryzias latipes ENSORLG00000003530 I 0.721
srsf6a Danio rerio ENSDARG00000013729 I 0.729
srsf6b Danio rerio ENSDARG00000016783 I 0.729
XP_001180940.1 Strongylocentrotus purpuratus XP_001180940.1 I 0.806
XP_002200515.1 Taeniopygia guttata ENSTGUG00000011492 I 0.729
XP_798746.1 Strongylocentrotus purpuratus XP_798746.1 I 0.806