AGAP004592 (Anopheles gambiae)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 AGAP004592 T32501_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
B52
M334_0.6 		Drosophila melanogaster GRUCAACCNGGCGACMG SELEX
Cook et al.(2011)
802_9111335 		0.961
B52
M126_0.6 		Drosophila melanogaster GGASGRV RNAcompete
Ray et al.(2013)
RNCMPT00134 		0.961
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
AGAP004592-PA RRM 6 68
AGAP004592-PA RRM 114 179
AGAP004592-PB RRM 6 68
AGAP004592-PC RRM 6 68
AGAP004592-PD RRM 6 68
AGAP004592-PE RRM 6 68
AGAP004592-PE RRM 120 185
AGAP004592-PF RRM 6 68
AGAP004592-PG RRM 6 68
AGAP004592-PH RRM 6 68
AGAP004592-PH RRM 114 179
AGAP004592-PI RRM 1 48

Links

Other RRM family RBPs
Other Anopheles gambiae RBPs

135 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ARB_05046 Arthroderma benhamiae ARB_05046 N 0.000
fgenesh1_pm.00772_#_139 Aspergillus carbonarius fgenesh1_pm.00772_#_139 N 0.000
AFLA_045910 Aspergillus flavus CADAFLAG00005918 N 0.000
AFUA_2G09100 Aspergillus fumigatus CADAFUAG00003903 N 0.000
ANIA_06074 Aspergillus nidulans CADANIAG00006943 N 0.000
An12g04760 Aspergillus niger CADANGAG00009919 N 0.000
AO090011000789 Aspergillus oryzae CADAORAG00005493 N 0.000
BDBG_05461 Blastomyces dermatitidis BDBG_05461 N 0.000
BC1G_15665 Botrytis cinerea BC1G_15665 N 0.000
CHGG_01583 Chaetomium globosum CHGG_01583 N 0.000
CIMG_01023 Coccidioides immitis CIMG_01023 N 0.000
CPSG_02191 Coccidioides posadasii CPSG_02191 N 0.000
GLRG_10397 Colletotrichum graminicola GLRG_10397 N 0.000
FOXG_00686 Fusarium oxysporum FOXG_00686 N 0.000
FVEG_00825 Fusarium verticillioides FVEG_00825 N 0.000
HCAG_03684 Histoplasma capsulatum HCAG_03684 N 0.000
MCYG_04687 Microsporum canis MCYG_04687 N 0.000
MGYG_02023 Microsporum gypseum MGYG_02023 N 0.000
estExt_Genewise1Plus.C_20994 Myceliophthora thermophila estExt_Genewise1Plus.C_20994 N 0.000
fgenesh1_pg.sca_1_chr1_3_0000632 Nectria haematococca fgenesh1_pg.sca_1_chr1_3_0000632 N 0.000
NFIA_084630 Neosartorya fischeri CADNFIAG00006736 N 0.000
PABG_01625 Paracoccidioides brasiliensis PABG_01625 N 0.000
Pc16g10490 Penicillium chrysogenum Pc16g10490 N 0.000
PMAA_029040 Penicillium marneffei PMAA_029040 N 0.000
SS1G_09907 Sclerotinia sclerotiorum SS1G_09907 N 0.000
TEQG_02465 Trichophyton equinum TEQG_02465 N 0.000
TERG_03290 Trichophyton rubrum TERG_03290 N 0.000
TESG_02820 Trichophyton tonsurans TESG_02820 N 0.000
TRV_01453 Trichophyton verrucosum TRV_01453 N 0.000
UREG_00968 Uncinocarpus reesii UREG_00968 N 0.000