GG21846 (Drosophila erecta)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 FBgn0114024 T43411_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
pAbp
M130_0.6 		Drosophila melanogaster GAAAAHV RNAcompete
Ray et al.(2013)
RNCMPT00139 		0.989
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
FBpp0140392 RRM 4 74
FBpp0140392 RRM 92 161
FBpp0140392 RRM 185 253
FBpp0140392 RRM 289 358

Links

Other RRM family RBPs
Other Drosophila erecta RBPs

74 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
DGIL_AUG5s9152g1t1 Acyrtosiphon pisum DGIL_AUG5s9152g1t1 I 0.718
DGIL_AUG5s5076g2t1 Acyrtosiphon pisum DGIL_AUG5s5076g2t1 I 0.736
DGIL_AUG5s1591g1t1 Acyrtosiphon pisum DGIL_AUG5s1591g1t1 I 0.707
AAEL010318 Aedes aegypti AAEL010318 I 0.804
ENSACAG00000016470 Anolis carolinensis ENSACAG00000016470 I 0.701
AGAP011092 Anopheles gambiae AGAP011092 I 0.783
amel4_ncbi_hmm1364 Apis mellifera amel4_ncbi_hmm1364 I 0.779
amel4_ncbi_hmm1700 Apis mellifera amel4_ncbi_hmm1700 I 0.779
amel4_ncbi_hmm2036 Apis mellifera amel4_ncbi_hmm2036 I 0.779
BGIBMGA003469 Bombyx mori BGIBMGA003469 I 0.766
A4IFC3_BOVIN Bos taurus ENSBTAG00000017125 I 0.704
Bm1_16080 Brugia malayi Bm1_16080 I 0.706
Bm1_06880 Brugia malayi Bm1_06880 I 0.706
CBN04295 Caenorhabditis brenneri CBN04295 I 0.713
CBG02207 Caenorhabditis briggsae CBG02207 N 0.706
pab-1 Caenorhabditis elegans Y106G6H.2 I 0.709
A6MKJ4_CALJA Callithrix jacchus ENSCJAG00000002512 I 0.704
PABPC4 Canis familiaris ENSCAFG00000003081 I 0.704
estExt_Genewise1.C_1790010 Capitella teleta estExt_Genewise1.C_1790010 I 0.716
PABPC4 Cavia porcellus ENSCPOG00000009552 I 0.704
CpipJ_CPIJ007980 Culex pipiens CpipJ_CPIJ007980 I 0.786
CPIJ007980 Culex quinquefasciatus CPIJ007980 I 0.786
BDE_estExt_fgenesh1_pg.C_380037 Daphnia pulex BDE_estExt_fgenesh1_pg.C_380037 I 0.734
GF12652 Drosophila ananassae FBgn0089688 I 0.925
GH21052 Drosophila grimshawi FBgn0128514 I 0.908
pAbp Drosophila melanogaster FBgn0261619 D 0.989
GI18654 Drosophila mojavensis FBgn0141393 I 0.911
GL11548 Drosophila persimilis FBgn0149157 I 0.922
GA18673-RA Drosophila pseudoobscura FBgn0078673 I 0.918
GM21847 Drosophila sechellia FBgn0176724 I 0.989
GD11341 Drosophila simulans FBgn0183090 I 0.986
GJ21671 Drosophila virilis FBgn0208790 I 0.925
GK19652 Drosophila willistoni FBgn0221650 I 0.918
GE11925 Drosophila yakuba FBgn0229707 I 0.979
LOC100054235 Equus caballus ENSECAG00000009396 I 0.704
PABPC4 Gallus gallus ENSGALG00000003800 I 0.714
PABPC4 Gorilla gorilla ENSGGOG00000004002 I 0.704
PABPC4 Homo sapiens ENSG00000090621 D 0.704
ISCW014211 Ixodes scapularis ISCW014211 I 0.759
LOAG_01058 Loa loa LOAG_01058 I 0.706
e_gw1.115.135.1 Lottia gigantea e_gw1.115.135.1 I 0.706
PABPC4 Loxodonta africana ENSLAFG00000000151 I 0.704
PABPC4 Macaca mulatta ENSMMUG00000007497 I 0.704
ENSMICG00000000431 Microcebus murinus ENSMICG00000000431 I 0.704
XM_001365232.1 Monodelphis domestica ENSMODG00000017657 I 0.708
Gm10110 Mus musculus ENSMUSG00000062093 I 0.701
Pabpc4 Mus musculus ENSMUSG00000011257 I 0.701
Pabpc1 Mus musculus ENSMUSG00000022283 I 0.701
nasonia_NCBI_hmm390743 Nasonia vitripennis nasonia_NCBI_hmm390743 I 0.779
nasonia_NCBI_hmm386743 Nasonia vitripennis nasonia_NCBI_hmm386743 I 0.779
nasonia_NCBI_hmm394743 Nasonia vitripennis nasonia_NCBI_hmm394743 I 0.779
PABPC4 Ochotona princeps ENSOPRG00000011984 I 0.701
ENSOANG00000007307 Ornithorhynchus anatinus ENSOANG00000007307 I 0.701
ENSOANG00000010001 Ornithorhynchus anatinus ENSOANG00000010001 I 0.717
PABPC4 Oryctolagus cuniculus ENSOCUG00000000562 I 0.701
PABPC4 Pan troglodytes ENSPTRG00000000573 I 0.704
PHUM617090 Pediculus humanus PHUM617090 I 0.784
ENSPPYG00000001506 Pongo pygmaeus ENSPPYG00000001506 I 0.704
Pabpc1 Rattus norvegicus ENSRNOG00000008639 I 0.701
D4AC21_RAT Rattus norvegicus ENSRNOG00000015642 I 0.708
XP_001177907.1 Strongylocentrotus purpuratus XP_001177907.1 I 0.709
XP_801795.2 Strongylocentrotus purpuratus XP_801795.2 I 0.709
PABPC4 Sus scrofa ENSSSCG00000003660 I 0.704
PABPC4 Taeniopygia guttata ENSTGUG00000001266 I 0.708
PABPC1 Taeniopygia guttata ENSTGUG00000012067 I 0.701
P20965 Xenopus laevis P20965 I 0.704
CAA40721 Xenopus laevis CAA40721 I 0.704
AAI08463 Xenopus laevis AAI08463 I 0.701
AAH73435 Xenopus laevis AAH73435 I 0.721
AAH72110 Xenopus laevis AAH72110 I 0.701
AAH52100 Xenopus laevis AAH52100 I 0.704
AAA60936 Xenopus laevis AAA60936 I 0.701
Q6IP09 Xenopus laevis Q6IP09 I 0.701
pabpc1 Xenopus tropicalis ENSXETG00000006635 I 0.708