Glyma06g04460.1 (Glycine max)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Glyma06g04460.1 T52671_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Glyma06g04460.1 RRM 26 96
Glyma06g04460.1 RRM 114 183
Glyma06g04460.1 RRM 205 274
Glyma06g04460.1 RRM 308 377

Links

Other RRM family RBPs
Other Glycine max RBPs

45 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Glyma04g04300.1 Glycine max Glyma04g04300.1 N 0.932
POPTR_0002s12570 Populus trichocarpa POPTR_0002s12570 N 0.815
Medtr3g147440 Medicago truncatula Medtr3g147440 N 0.815
GSVIVG00009455001 Vitis vinifera GSVIVG00009455001 N 0.804
B9GNU4_POPTR Populus trichocarpa POPTR_0014s02550 N 0.790
cassava6947.valid.m1 Manihot esculenta cassava6947.valid.m1 N 0.786
Glyma14g09300.1 Glycine max Glyma14g09300.1 N 0.786
GSVIVG00022079001 Vitis vinifera GSVIVG00022079001 N 0.779
Glyma07g33860.1 Glycine max Glyma07g33860.1 N 0.779
A9PEX9_POPTR Populus trichocarpa POPTR_0001s31160 N 0.779
Glyma17g35890.1 Glycine max Glyma17g35890.1 N 0.779
29801.m003152 Ricinus communis 29801.m003152 N 0.779
Medtr1g024150 Medicago truncatula Medtr1g024150 N 0.779
ppa002620m Prunus persica ppa002620m N 0.776
30170.m013847 Ricinus communis 30170.m013847 N 0.776
ppa002618m Prunus persica ppa002618m N 0.776
cassava12359.valid.m1 Manihot esculenta cassava12359.valid.m1 N 0.772
Glyma02g11580.1 Glycine max Glyma02g11580.1 N 0.772
mgf004973m Mimulus guttatus mgf004973m N 0.769
mgf009542m Mimulus guttatus mgf009542m N 0.769
cassava17495.valid.m1 Manihot esculenta cassava17495.valid.m1 N 0.769
B9HS30_POPTR Populus trichocarpa POPTR_0009s10220 N 0.769
Medtr4g130250 Medicago truncatula Medtr4g130250 N 0.762
ppa002607m Prunus persica ppa002607m N 0.758
Cucsa.244510 Cucumis sativus Cucsa.244510 N 0.754
MDP0000253709 Malus x domestica MDP0000253709 N 0.751
MDP0000156895 Malus x domestica MDP0000156895 N 0.751
MDP0000497543 Malus x domestica MDP0000497543 N 0.751
LjSGA_012037.1 Lotus japonicus LjSGA_012037.1 N 0.747
PK02172.1 Cannabis sativa PK02172.1 N 0.747
MDP0000283985 Malus x domestica MDP0000283985 N 0.744
Cucsa.219740 Cucumis sativus Cucsa.219740 N 0.744
BGIOSIBCE029001 Oryza indica BGIOSIBCE029001 N 0.726
LOC_Os09g02700 Oryza sativa LOC_Os09g02700 N 0.726
XM_002883853.1 Arabidopsis lyrata scaffold_303734.1 N 0.719
PK00659.1 Cannabis sativa PK00659.1 N 0.719
LOC_Os08g22354 Oryza sativa LOC_Os08g22354 N 0.716
BGIOSIBCE027387 Oryza indica BGIOSIBCE027387 N 0.716
estExt_fgenesh1_pg.C_2570045 Physcomitrella patens estExt_fgenesh1_pg.C_2570045 N 0.712
PAB4 Arabidopsis thaliana AT2G23350-TAIR-G N 0.708
estExt_fgenesh1_pm.C_2810008 Physcomitrella patens estExt_fgenesh1_pm.C_2810008 N 0.708
XM_002869128.1 Arabidopsis lyrata Al_scaffold_0007_654 N 0.708
e_gw1.51.213.1 Physcomitrella patens e_gw1.51.213.1 N 0.708
XM_002878634.1 Arabidopsis lyrata scaffold_400317.1 N 0.705
Sb02g017910 Sorghum bicolor Sb02g017910 N 0.701