SAKL0H10846g (Lachancea kluyveri)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 SAKL0H10846g T06553_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
SAKL0H10846g CCCH ZF 105 130
SAKL0H10846g CCCH ZF 136 159

Links

Other CCCH ZF family RBPs
Other Lachancea kluyveri RBPs

65 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
22086_YPL054W Saccharomyces mikatae 22086_YPL054W N 0.760
23616_YPL054W Saccharomyces paradoxus 23616_YPL054W N 0.745
25080_YPL054W Saccharomyces bayanus 25080_YPL054W N 0.780
A7TTU4_VANPO Vanderwaltozyma polyspora A7TTU4_VANPO N 0.760
AB08315.1 Alternaria brassicicola AB08315.1 N 0.745
ADR062W Ashbya gossypii ADR062W N 0.920
ACLA_033580 Aspergillus clavatus CADACLAG00003610 N 0.731
AFLA_103810 Aspergillus flavus CADAFLAG00012116 N 0.765
AFUA_3G05570 Aspergillus fumigatus CADAFUAG00005783 N 0.765
An11g11070 Aspergillus niger CADANGAG00009424 N 0.765
ANIA_03447 Aspergillus nidulans CADANIAG00009587 N 0.745
AO090020000028 Aspergillus oryzae CADAORAG00006562 N 0.765
ATEG_08978 Aspergillus terreus CADATEAG00006440 N 0.765
NFIA_071620 Neosartorya fischeri CADNFIAG00006536 N 0.765
Cd36_85970 Candida dubliniensis Cd36_85970 N 0.800
CHGG_00049 Chaetomium globosum CHGG_00049 N 0.784
CIMG_10872 Coccidioides immitis CIMG_10872 N 0.765
CLUG_02022 Candida lusitaniae CLUG_02022 N 0.780
CPAG_02338 Candida parapsilosis CPAG_02338 N 0.720
CPSG_06815 Coccidioides posadasii CPSG_06815 N 0.765
CTRG_02259 Candida tropicalis CTRG_02259 N 0.780
DEHA0D17303g Debaryomyces hansenii DEHA0D17303g N 0.760
EAT89389.2 Phaeosphaeria nodorum EAT89389.2 N 0.745
estExt_fgenesh1_kg.C_60003 Myceliophthora thermophila estExt_fgenesh1_kg.C_60003 N 0.765
estExt_fgenesh1_pg.C_160206 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_160206 N 0.745
estExt_fgenesh5_pg.C_100355 Trichoderma reesei estExt_fgenesh5_pg.C_100355 N 0.784
estExt_Genewise1.C_110035 Neurospora tetrasperma estExt_Genewise1.C_110035 N 0.765
estExt_Genewise1.C_60695 Trichoderma atroviride estExt_Genewise1.C_60695 N 0.765
estExt_Genewise1.C_81229 Thielavia terrestris estExt_Genewise1.C_81229 N 0.765
estExt_Genewise1Plus.C_130028 Neurospora discreta estExt_Genewise1Plus.C_130028 N 0.765
EuGene12000543 Heterobasidion annosum EuGene12000543 N 0.700
e_gw1.10.437.1 Cryphonectria parasitica e_gw1.10.437.1 N 0.725
e_gw1.29.29.1 Trichoderma virens e_gw1.29.29.1 N 0.784
e_gwh1.2.1.2495.1 Pichia stipitis e_gwh1.2.1.2495.1 N 0.800
fgenesh1_pm.00118_#_26 Aspergillus carbonarius fgenesh1_pm.00118_#_26 N 0.765
FOXG_04082 Fusarium oxysporum FOXG_04082 N 0.780
FVEG_07196 Fusarium verticillioides FVEG_07196 N 0.780
GLRG_01727 Colletotrichum graminicola GLRG_01727 N 0.765
GSTUMT00003772001 Tuber melanosporum GSTUMT00003772001 N 0.784
gw1.28.197.1 Nectria haematococca gw1.28.197.1 N 0.765
HCAG_10294 Histoplasma capsulatum HCAG_10294 N 0.765
KLLA0B09878g Kluyveromyces lactis KLLA0B09878g N 0.820
KLTH0E11836g Kluyveromyces thermotolerans KLTH0E11836g N 0.880
MCYG_08235 Microsporum canis MCYG_08235 N 0.745
MGG_03480 Magnaporthe oryzae MGG_03480 N 0.745
MGYG_05636 Microsporum gypseum MGYG_05636 N 0.745
NCU05007 Neurospora crassa NCU05007 N 0.765
orf19.7385 Candida albicans orf19.7385 N 0.800
PABG_05614 Paracoccidioides brasiliensis PABG_05614 N 0.765
Pa_5_7490 Podospora anserina Pa_5_7490 N 0.765
Pc20g08250 Penicillium chrysogenum Pc20g08250 N 0.765
PMAA_005110 Penicillium marneffei PMAA_005110 N 0.765
PTRG_01963 Pyrenophora tritici repentis PTRG_01963 N 0.745
Scas_Contig567.6 Saccharomyces castellii Scas_Contig567.6 N 0.860
SJAG_03191 Schizosaccharomyces japonicus SJAG_03191 N 0.765
SNOG_02658 Stagonospora nodorum SNOG_02658 N 0.745
TEQG_01582 Trichophyton equinum TEQG_01582 N 0.745
TERG_02518 Trichophyton rubrum TERG_02518 N 0.745
UREG_06970 Uncinocarpus reesii UREG_06970 N 0.765
VDAG_09556 Verticillium dahliae VDAG_09556 N 0.780
VDBG_09822 Verticillium albo atrum VDBG_09822 N 0.780
XP_002493509.1 Pichia pastoris XP_002493509.1 N 0.760
YALI0B12540g Yarrowia lipolytica YALI0B12540g N 0.820
LEE1 Saccharomyces cerevisiae YPL054W N 0.745
ZYRO0F08690g Zygosaccharomyces rouxii ZYRO0F08690g N 0.784