NCBP2 (Gallus gallus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSGALG00000006843 T37660_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSGALP00000011061 RRM 44 114

Links

Other RRM family RBPs
Other Gallus gallus RBPs

140 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
2118330B Xenopus laevis 2118330B N 0.859
91084 Helobdella robusta 91084 N 0.803
NCBP2_AEDAE Aedes aegypti AAEL006135 N 0.831
AAH72902 Xenopus laevis AAH72902 N 0.873
NCBP2_ANOGA Anopheles gambiae AGAP002547 N 0.831
amel4_ncbi_hmm3188 Apis mellifera amel4_ncbi_hmm3188 N 0.859
Ame_R004608 Ailuropoda melanoleuca Ame_R004608 N 0.930
Aqu1.228507 Amphimedon queenslandica Aqu1.228507 N 0.704
BC1G_04395 Botrytis cinerea BC1G_04395 N 0.732
BGIBMGA007585 Bombyx mori BGIBMGA007585 N 0.817
BRADI3G48560 Brachypodium distachyon BRADI3G48560 N 0.718
CAA59259 Xenopus laevis CAA59259 N 0.859
cassava43645.valid.m1 Manihot esculenta cassava43645.valid.m1 N 0.704
cassava43646.valid.m1 Manihot esculenta cassava43646.valid.m1 N 0.704
CBG22194 Caenorhabditis briggsae CBG22194 N 0.000
CBN14593 Caenorhabditis brenneri CBN14593 N 0.000
chr3.CM0160.780.nd Lotus japonicus chr3.CM0160.780.nd N 0.000
NCBP2_CULQU Culex quinquefasciatus CPIJ003555 N 0.817
CpipJ_CPIJ003555 Culex pipiens CpipJ_CPIJ003555 N 0.817
CRE20447 Caenorhabditis remanei CRE20447 N 0.000
Cucsa.174450 Cucumis sativus Cucsa.174450 N 0.704
DGIL_AUG5s12516g4t1 Acyrtosiphon pisum DGIL_AUG5s12516g4t1 N 0.761
DGIL_AUG5s15103g4t1 Acyrtosiphon pisum DGIL_AUG5s15103g4t1 N 0.732
ENSACAG00000015128 Anolis carolinensis ENSACAG00000015128 N 0.817
NCBP2_BOVIN Bos taurus ENSBTAG00000008873 N 0.930
NCBP2 Canis familiaris ENSCAFG00000013100 N 0.930
ENSCHOG00000005967 Choloepus hoffmanni ENSCHOG00000005967 N 0.915
ENSCING00000003079 Ciona intestinalis ENSCING00000003079 N 0.761
ENSCING00000016926 Ciona intestinalis ENSCING00000016926 N 0.761
LOC100404338 Callithrix jacchus ENSCJAG00000013735 N 0.930
NCBP2 Cavia porcellus ENSCPOG00000002976 N 0.915
ENSCSAVG00000005823 Ciona savignyi ENSCSAVG00000005823 N 0.732
ncbp2 Danio rerio ENSDARG00000014898 N 0.845
NCBP2 Equus caballus ENSECAG00000016153 N 0.930
NCBP2 Homo sapiens ENSG00000114503 N 0.930
NCBP2 Gasterosteus aculeatus ENSGACG00000006238 N 0.817
NCBP2_CHICK Gallus gallus ENSGALG00000005753 N 0.817
NCBP2 Loxodonta africana ENSLAFG00000006372 N 0.930
NCBP2L Loxodonta africana ENSLAFG00000027581 N 0.803
ENSMEUG00000004730 Macropus eugenii ENSMEUG00000004730 N 0.958
ENSMEUG00000008126 Macropus eugenii ENSMEUG00000008126 N 0.944
ENSMGAG00000002257 Meleagris gallopavo ENSMGAG00000002257 N 0.817
ENSMGAG00000006728 Meleagris gallopavo ENSMGAG00000006728 N 1.000
NCBP2 Microcebus murinus ENSMICG00000003162 N 0.930
NCBP2 Myotis lucifugus ENSMLUG00000017500 N 0.930
NCBP2 Macaca mulatta ENSMMUG00000007825 N 0.930
XM_001373408.1 Monodelphis domestica ENSMODG00000015908 N 0.944
XM_001371285.1 Monodelphis domestica ENSMODG00000023276 N 0.944
XM_001367531.1 Monodelphis domestica ENSMODG00000024607 N 0.915
LOC100020122 Monodelphis domestica ENSMODG00000024608 N 0.915
Ncbp2 Mus musculus ENSMUSG00000022774 N 0.930
NCBP2 Oryctolagus cuniculus ENSOCUG00000006738 N 0.944
ENSOCUG00000014372 Oryctolagus cuniculus ENSOCUG00000014372 N 0.930
NCBP2 Otolemur garnettii ENSOGAG00000005009 N 0.930
ENSOPRG00000007634 Ochotona princeps ENSOPRG00000007634 N 0.930
NCBP2 Oryzias latipes ENSORLG00000011235 N 0.873
NCBP2 Procavia capensis ENSPCAG00000003219 N 0.915
ENSPPYG00000014449 Pongo pygmaeus ENSPPYG00000014449 N 0.930
NCBP2 Pan troglodytes ENSPTRG00000015789 N 0.930
NCBP2 Pteropus vampyrus ENSPVAG00000017273 N 0.915
Pigz Rattus norvegicus ENSRNOG00000001746 N 0.930
NCBP2 Sorex araneus ENSSARG00000014294 N 0.845
ENSSSCG00000011835 Sus scrofa ENSSSCG00000011835 N 0.930
ENSSSCG00000011840 Sus scrofa ENSSSCG00000011840 N 0.930
NCBP2L Sus scrofa ENSSSCG00000012562 N 0.732
ENSSTOG00000001584 Spermophilus tridecemlineatus ENSSTOG00000001584 N 0.944
NCBP2 Tupaia belangeri ENSTBEG00000015222 N 0.930
B5G279_TAEGU Taeniopygia guttata ENSTGUG00000007323 N 0.831
NCBP2 Taeniopygia guttata ENSTGUG00000008864 N 0.986
NCBP2 Tetraodon nigroviridis ENSTNIG00000006065 N 0.859
NCBP2 Takifugu rubripes ENSTRUG00000018355 N 0.873
NCBP2 Tursiops truncatus ENSTTRG00000013908 N 0.930
NCBP2 Vicugna pacos ENSVPAG00000010369 N 0.915
ncbp2 Xenopus tropicalis ENSXETG00000019384 N 0.887
estExt_fgenesh1_kg.C_1730002 Daphnia pulex estExt_fgenesh1_kg.C_1730002 N 0.775
estExt_fgenesh1_kg.C_sca_10_chr8_2_00014 Nectria haematococca estExt_fgenesh1_kg.C_sca_10_chr8_2_00014 N 0.000
estExt_Genewise1.C_5160046 Capitella teleta estExt_Genewise1.C_5160046 N 0.761
estExt_Genewise1.C_sca_180152 Lottia gigantea estExt_Genewise1.C_sca_180152 N 0.817
estExt_Genewise1Plus.C_150343 Trichoderma atroviride estExt_Genewise1Plus.C_150343 N 0.704
estExt_Genewise1Plus.C_40730 Myceliophthora thermophila estExt_Genewise1Plus.C_40730 N 0.000
estExt_Genewise1Plus.C_50921 Neurospora discreta estExt_Genewise1Plus.C_50921 N 0.000
estExt_gwp.C_920142 Nematostella vectensis estExt_gwp.C_920142 N 0.831
e_gw1.1.927.1 Trichoplax adhaerens e_gw1.1.927.1 N 0.000
e_gw1.10.746.1 Trichoderma virens e_gw1.10.746.1 N 0.704
e_gw1.17.191.1 Trichoderma reesei e_gw1.17.191.1 N 0.718
e_gw1.18.125.1 Batrachochytrium dendrobatidis e_gw1.18.125.1 N 0.000
e_gw1.3.1174.1 Thielavia terrestris e_gw1.3.1174.1 N 0.000
ncbp-2 Caenorhabditis elegans F26A3.2 N 0.000
Cbp20 Drosophila melanogaster FBgn0022943 N 0.775
GA11577-RA Drosophila pseudoobscura FBgn0071628 N 0.775
GF16759 Drosophila ananassae FBgn0093780 N 0.775
GG22670 Drosophila erecta FBgn0114835 N 0.775
GH15101 Drosophila grimshawi FBgn0122576 N 0.775
GI23717 Drosophila mojavensis FBgn0146442 N 0.775
GL12592 Drosophila persimilis FBgn0150198 N 0.775
GM15280 Drosophila sechellia FBgn0170200 N 0.775
GD19204 Drosophila simulans FBgn0190709 N 0.775
GJ18756 Drosophila virilis FBgn0205908 N 0.761
GJ23276 Drosophila virilis FBgn0210378 N 0.775
GK11244 Drosophila willistoni FBgn0213255 N 0.775
GE25514 Drosophila yakuba FBgn0242580 N 0.775
fgeneshMC_pm.5_#_40 Mucor circinelloides fgeneshMC_pm.5_#_40 N 0.732
FVEG_07036 Fusarium verticillioides FVEG_07036 N 0.000
GLRG_00177 Colletotrichum graminicola GLRG_00177 N 0.000
Glyma12g33400.1 Glycine max Glyma12g33400.1 N 0.000
Glyma13g37030.1 Glycine max Glyma13g37030.1 N 0.704
GRMZM2G034804 Zea mays GRMZM2G034804 N 0.718
GSTUMT00010626001 Tuber melanosporum GSTUMT00010626001 N 0.718
GSVIVG00020599001 Vitis vinifera GSVIVG00020599001 N 0.704
gw.81.90.1 Branchiostoma floridae gw.81.90.1 N 0.845
gw.93.114.1 Branchiostoma floridae gw.93.114.1 N 0.845
gw1.11.372.1 Chlorella vulgaris gw1.11.372.1 N 0.000
gw1.12.351.1 Coccomyxa C 169 gw1.12.351.1 N 0.000
gw1.29.143.1 Phycomyces blakesleeanus gw1.29.143.1 N 0.718
NCBP2_IXOSC Ixodes scapularis ISCW017479 N 0.789
LOAG_03270 Loa loa LOAG_03270 N 0.789
LOC_Os02g39890 Oryza sativa LOC_Os02g39890 N 0.000
MDP0000315402 Malus x domestica MDP0000315402 N 0.000
MGG_06296 Magnaporthe oryzae MGG_06296 N 0.000
Minc02990 Meloidogyne incognita Minc02990 N 0.000
Minc06129 Meloidogyne incognita Minc06129 N 0.000
nasonia_NCBI_hmm134534 Nasonia vitripennis nasonia_NCBI_hmm134534 N 0.803
nasonia_NCBI_hmm1532803 Nasonia vitripennis nasonia_NCBI_hmm1532803 N 0.859
NCU00210 Neurospora crassa NCU00210 N 0.000
P52299 Xenopus laevis P52299 N 0.873
Pa_7_2520 Podospora anserina Pa_7_2520 N 0.000
PDK_20s1327431g003 Phoenix dactylifera PDK_20s1327431g003 N 0.718
PHUM535920 Pediculus humanus PHUM535920 N 0.831
PK11911.1 Cannabis sativa PK11911.1 N 0.000
A9PIB0_POPTR Populus trichocarpa POPTR_0007s01170 N 0.000
ppa010346m Prunus persica ppa010346m N 0.000
Ppa-ncbp-2 Pristionchus pacificus PPA17381 N 0.718
SB04G025800 Sorghum bicolor Sb04g025800 N 0.718
SJAG_01064 Schizosaccharomyces japonicus SJAG_01064 N 0.000
Sjc_0008080 Schistosoma japonicum Sjc_0008080 N 0.718
SPPG_00516 Spizellomyces punctatus SPPG_00516 N 0.746
SS1G_13629 Sclerotinia sclerotiorum SS1G_13629 N 0.732
WUBG_16568 Wuchereria bancrofti WUBG_16568 N 0.789
XP_002160076.1 Hydra magnipapillata XP_002160076.1 N 0.817
XP_002166119.1 Hydra magnipapillata XP_002166119.1 N 0.803