GRMZM2G303312 (Zea mays)
YTH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF04146 (YTH) IPR007275 GRMZM2G303312 T62443_0.6 MaizeSequence (2009-Oct-16)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G303312_P01 YTH 516 606

Links

Other YTH family RBPs
Other Zea mays RBPs

70 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
29765.m000746 Ricinus communis 29765.m000746 N 0.758
BGIOSIBCE013986 Oryza indica BGIOSIBCE013986 N 0.846
BGIOSIBCE017245 Oryza indica BGIOSIBCE017245 N 0.835
BGIOSIBCE026930 Oryza indica BGIOSIBCE026930 N 0.703
BRADI1G05970 Brachypodium distachyon BRADI1G05970 N 0.725
BRADI1G74560 Brachypodium distachyon BRADI1G74560 N 0.703
BRADI3G06027 Brachypodium distachyon BRADI3G06027 N 0.846
BRADI4G02150 Brachypodium distachyon BRADI4G02150 N 0.725
BRADI5G01317 Brachypodium distachyon BRADI5G01317 N 0.835
cassava12386.valid.m1 Manihot esculenta cassava12386.valid.m1 N 0.714
cassava12387.valid.m1 Manihot esculenta cassava12387.valid.m1 N 0.714
cassava12388.valid.m1 Manihot esculenta cassava12388.valid.m1 N 0.714
cassava12389.valid.m1 Manihot esculenta cassava12389.valid.m1 N 0.714
cassava13322.valid.m1 Manihot esculenta cassava13322.valid.m1 N 0.736
cassava13323.valid.m1 Manihot esculenta cassava13323.valid.m1 N 0.736
cassava13324.valid.m1 Manihot esculenta cassava13324.valid.m1 N 0.736
cassava14932.m1 Manihot esculenta cassava14932.m1 N 0.736
cassava30727.valid.m1 Manihot esculenta cassava30727.valid.m1 N 0.703
cassava30728.valid.m1 Manihot esculenta cassava30728.valid.m1 N 0.703
cassava30729.valid.m1 Manihot esculenta cassava30729.valid.m1 N 0.703
cassava35657.valid.m1 Manihot esculenta cassava35657.valid.m1 N 0.703
cassava35658.valid.m1 Manihot esculenta cassava35658.valid.m1 N 0.703
cassava35659.valid.m1 Manihot esculenta cassava35659.valid.m1 N 0.703
cassava35660.valid.m1 Manihot esculenta cassava35660.valid.m1 N 0.703
cassava35661.valid.m1 Manihot esculenta cassava35661.valid.m1 N 0.703
cassava35662.valid.m1 Manihot esculenta cassava35662.valid.m1 N 0.703
cassava35663.valid.m1 Manihot esculenta cassava35663.valid.m1 N 0.703
cassava35665.valid.m1 Manihot esculenta cassava35665.valid.m1 N 0.703
cassava35666.valid.m1 Manihot esculenta cassava35666.valid.m1 N 0.703
cassava35667.valid.m1 Manihot esculenta cassava35667.valid.m1 N 0.703
cassava38866.m1 Manihot esculenta cassava38866.m1 N 0.703
cassava38867.m1 Manihot esculenta cassava38867.m1 N 0.703
cassava42992.valid.m1 Manihot esculenta cassava42992.valid.m1 N 0.725
cassava42993.valid.m1 Manihot esculenta cassava42993.valid.m1 N 0.725
chr6.CM0885.260.nc Lotus japonicus chr6.CM0885.260.nc N 0.758
chr6.CM0885.320.nc Lotus japonicus chr6.CM0885.320.nc N 0.758
chr6.LjT36O06.80.nd Lotus japonicus chr6.LjT36O06.80.nd N 0.703
Glyma08g24210.1 Glycine max Glyma08g24210.1 N 0.703
Glyma17g04270.1 Glycine max Glyma17g04270.1 N 0.714
GRMZM2G076062 Zea mays GRMZM2G076062 N 0.714
GRMZM2G126338 Zea mays GRMZM2G126338 N 0.703
GRMZM2G330019 Zea mays GRMZM2G330019 N 0.703
GSVIVG00017649001 Vitis vinifera GSVIVG00017649001 N 0.725
GSVIVG00023248001 Vitis vinifera GSVIVG00023248001 N 0.725
LjSGA_044186.1 Lotus japonicus LjSGA_044186.1 N 0.728
LjSGA_073042.1 Lotus japonicus LjSGA_073042.1 N 0.750
LOC_Os03g53670 Oryza sativa LOC_Os03g53670 N 0.703
LOC_Os04g04000 Oryza sativa LOC_Os04g04000 N 0.846
LOC_Os05g01520 Oryza sativa LOC_Os05g01520 N 0.835
LOC_Os08g12760 Oryza sativa LOC_Os08g12760 N 0.703
MDP0000256033 Malus x domestica MDP0000256033 N 0.758
MDP0000488248 Malus x domestica MDP0000488248 N 0.736
Medtr2g005610 Medicago truncatula Medtr2g005610 N 0.736
Medtr2g085380 Medicago truncatula Medtr2g085380 N 0.703
Medtr8g134440 Medicago truncatula Medtr8g134440 N 0.703
mgf001716m Mimulus guttatus mgf001716m N 0.747
mgf014829m Mimulus guttatus mgf014829m N 0.747
mgf019846m Mimulus guttatus mgf019846m N 0.736
PDK_20s1308332g001 Phoenix dactylifera PDK_20s1308332g001 N 0.703
PDK_20s1352821g002 Phoenix dactylifera PDK_20s1352821g002 N 0.714
PK26094.1 Cannabis sativa PK26094.1 N 0.714
B9N0D5_POPTR Populus trichocarpa POPTR_0004s23250 N 0.725
B9HII9_POPTR Populus trichocarpa POPTR_0008s09960 N 0.703
B9N770_POPTR Populus trichocarpa POPTR_0022s00680 N 0.703
ppa003557m Prunus persica ppa003557m N 0.758
ppa018635m Prunus persica ppa018635m N 0.703
SB01G008170 Sorghum bicolor Sb01g008170 N 0.703
Sb01g046550 Sorghum bicolor Sb01g046550 N 0.703
SB07G006330 Sorghum bicolor Sb07g006330 N 0.703
SB09G000580 Sorghum bicolor Sb09g000580 N 0.945