PCBP4 (Ornithorhynchus anatinus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSOANG00000014110 T19172_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Pcbp3
M188_0.6 		Mus musculus UUUYCC RNAcompete
Ray et al.(2013)
RNCMPT00215 		0.758
pcbp2
M211_0.6 		Danio rerio WWUCCC RNAcompete
Ray et al.(2013)
RNCMPT00246 		0.726
PCBP2
M043_0.6 		Homo sapiens CCYYCCH RNAcompete
Ray et al.(2013)
RNCMPT00044 		0.726
PCBP1
M177_0.6 		Homo sapiens CCWWHCC RNAcompete
Ray et al.(2013)
RNCMPT00186 		0.716
Pcbp1
M207_0.6 		Mus musculus CYUUCC RNAcompete
Ray et al.(2013)
RNCMPT00239 		0.716
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSOANP00000022257 KH 18 79
ENSOANP00000022257 KH 103 166
ENSOANP00000022257 KH 243 305
ENSOANP00000022258 KH 18 79
ENSOANP00000022258 KH 103 166
ENSOANP00000022258 KH 243 305
ENSOANP00000022259 KH 10 45
ENSOANP00000022259 KH 69 100
ENSOANP00000022259 KH 147 184
ENSOANP00000022259 KH 261 323

Links

Other KH family RBPs
Other Ornithorhynchus anatinus RBPs

113 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
La Drosophila melanogaster FBgn0011638 N 0.000
GA10645-RA Drosophila pseudoobscura FBgn0070701 N 0.000
GF15376 Drosophila ananassae FBgn0092401 N 0.000
GG21576 Drosophila erecta FBgn0113754 N 0.000
GH13748 Drosophila grimshawi FBgn0121224 N 0.000
GI17890 Drosophila mojavensis FBgn0140631 N 0.000
GL26419 Drosophila persimilis FBgn0164001 N 0.000
GJ17394 Drosophila virilis FBgn0204566 N 0.000
GE12598 Drosophila yakuba FBgn0230329 N 0.000