ENSOANG00000008789 (Ornithorhynchus anatinus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSOANG00000008789 T39508_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
SFPQ
M308_0.6 		Homo sapiens Sequence logo not available UGGAGAGGAAC SELEX
Cook et al.(2011)
489_12403470 		0.970
SFPQ
M168_0.6 		Homo sapiens KURRUKK RNAcompete
Ray et al.(2013)
RNCMPT00177 		0.970
NONO
M309_0.6 		Homo sapiens Sequence logo not available GAGAGGAAC SELEX
Cook et al.(2011)
490_12403470 		0.744
NONO
M307_0.6 		Homo sapiens AGGGA SELEX
Cook et al.(2011)
488_9001221 		0.744
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSOANP00000014004 RRM 29 93
ENSOANP00000014004 RRM 103 170
ENSOANP00000014005 RRM 17 84

Links

Other RRM family RBPs
Other Ornithorhynchus anatinus RBPs

112 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SFPQ Homo sapiens ENSG00000116560 D 0.970
NONO Homo sapiens ENSG00000147140 D 0.744
PSPC1 Myotis lucifugus ENSMLUG00000017663 I 0.737
ENSORLG00000007459 Oryzias latipes ENSORLG00000007459 I 0.805
NONO Procavia capensis ENSPCAG00000002541 I 0.744
SFPQ Procavia capensis ENSPCAG00000006164 I 0.970
ENSPPYG00000001560 Pongo pygmaeus ENSPPYG00000001560 I 0.970
ENSPPYG00000005186 Pongo pygmaeus ENSPPYG00000005186 I 0.737
ENSPPYG00000020451 Pongo pygmaeus ENSPPYG00000020451 I 0.744
SFPQ Pan troglodytes ENSPTRG00000000518 I 0.970
PSPC1 Pan troglodytes ENSPTRG00000005677 I 0.737
XR_025068.1 Pan troglodytes ENSPTRG00000022010 I 0.744
SFPQ Ochotona princeps ENSOPRG00000013696 I 0.970
NONO Otolemur garnettii ENSOGAG00000004834 I 0.744
ENSOCUG00000021848 Oryctolagus cuniculus ENSOCUG00000021848 I 0.744
SFPQ Macaca mulatta ENSMMUG00000019154 I 0.782
PSPC1 Macaca mulatta ENSMMUG00000020262 I 0.737
LOC697263 Macaca mulatta ENSMMUG00000020481 I 0.744
NONO Monodelphis domestica ENSMODG00000004445 I 0.737
PSPC1 Monodelphis domestica ENSMODG00000008029 I 0.737
ENSMODG00000017937 Monodelphis domestica ENSMODG00000017937 I 0.992
Pspc1 Mus musculus ENSMUSG00000021938 I 0.737
Sfpq Mus musculus ENSMUSG00000028820 I 0.970
Nono Mus musculus ENSMUSG00000031311 I 0.744
SFPQ Oryctolagus cuniculus ENSOCUG00000001877 I 0.970
PSPC1 Oryctolagus cuniculus ENSOCUG00000006153 I 0.737
SFPQ Pteropus vampyrus ENSPVAG00000001865 I 0.895
PSPC1 Pteropus vampyrus ENSPVAG00000005036 I 0.729
ENSTNIG00000011331 Tetraodon nigroviridis ENSTNIG00000011331 I 0.850
ENSTRUG00000003783 Takifugu rubripes ENSTRUG00000003783 I 0.865
ENSTSYG00000009311 Tarsius syrichta ENSTSYG00000009311 I 0.910
PSPC1 Tursiops truncatus ENSTTRG00000003343 I 0.729
NONO Tursiops truncatus ENSTTRG00000009605 I 0.744
SFPQ Tursiops truncatus ENSTTRG00000013930 I 0.970
NONO Vicugna pacos ENSVPAG00000002272 I 0.744
SFPQ Vicugna pacos ENSVPAG00000006960 I 0.970
sfpq Xenopus tropicalis ENSXETG00000009682 I 0.865
Ame_R005060 Ailuropoda melanoleuca Ame_R005060 I 0.970
Ame_R014248 Ailuropoda melanoleuca Ame_R014248 I 0.737
PSPC1 Taeniopygia guttata ENSTGUG00000011295 I 0.759
NONO Taeniopygia guttata ENSTGUG00000007048 I 0.729
SFPQ Taeniopygia guttata ENSTGUG00000001722 I 0.970
NONO Pteropus vampyrus ENSPVAG00000016503 I 0.744
Nono Rattus norvegicus ENSRNOG00000003689 I 0.744
Sfpq Rattus norvegicus ENSRNOG00000013154 I 0.970
Pspc1 Rattus norvegicus ENSRNOG00000020782 I 0.737
ENSRNOG00000030425 Rattus norvegicus ENSRNOG00000030425 I 0.707
PSPC1 Sorex araneus ENSSARG00000000888 I 0.737
NONO Sorex araneus ENSSARG00000007959 I 0.737
PSPC1 Sus scrofa ENSSSCG00000009569 I 0.729
SFPQ Spermophilus tridecemlineatus ENSSTOG00000014004 I 0.970
NONO Spermophilus tridecemlineatus ENSSTOG00000015869 I 0.744
SFPQ Tupaia belangeri ENSTBEG00000006238 I 0.910
Ame_R017809 Ailuropoda melanoleuca Ame_R017809 I 0.744
NONO Myotis lucifugus ENSMLUG00000002489 I 0.722
PSPC1 Anolis carolinensis ENSACAG00000002093 I 0.759
PSPC1 Callithrix jacchus ENSCJAG00000004554 I 0.737
TAF1 Callithrix jacchus ENSCJAG00000013390 I 0.744
ENSCJAG00000035318 Callithrix jacchus ENSCJAG00000035318 I 0.797
PSPC1 Cavia porcellus ENSCPOG00000000395 I 0.737
ENSCPOG00000010263 Cavia porcellus ENSCPOG00000010263 I 0.744
SFPQ Cavia porcellus ENSCPOG00000015018 I 0.970
ENSCPOG00000023605 Cavia porcellus ENSCPOG00000023605 I 0.737
sfpq Danio rerio ENSDARG00000011564 I 0.789
Sfpq Dipodomys ordii ENSDORG00000008109 I 0.940
Pspc1 Dipodomys ordii ENSDORG00000016050 I 0.729
LOC100069588 Equus caballus ENSECAG00000000642 I 0.970
ENSCJAG00000003136 Callithrix jacchus ENSCJAG00000003136 I 0.722
LOC100386194 Callithrix jacchus ENSCJAG00000001431 I 0.970
ENSACAG00000013307 Anolis carolinensis ENSACAG00000013307 I 0.932
PSPC1_BOVIN Bos taurus ENSBTAG00000003934 I 0.729
Q2KJ42_BOVIN Bos taurus ENSBTAG00000012152 I 0.744
SFPQ Bos taurus ENSBTAG00000016328 I 0.970
LOC607081 Canis familiaris ENSCAFG00000003207 I 0.744
ENSCAFG00000003595 Canis familiaris ENSCAFG00000003595 I 0.970
ENSCAFG00000017071 Canis familiaris ENSCAFG00000017071 I 0.744
ENSCAFG00000017608 Canis familiaris ENSCAFG00000017608 I 0.857
XM_532566.2 Canis familiaris ENSCAFG00000018271 I 0.940
PSPC1 Choloepus hoffmanni ENSCHOG00000008913 I 0.737
SFPQ Choloepus hoffmanni ENSCHOG00000009131 I 0.774
NONO Equus caballus ENSECAG00000008502 I 0.744
PSPC1 Erinaceus europaeus ENSEEUG00000011288 I 0.722
NONO Gorilla gorilla ENSGGOG00000006194 I 0.744
PSPC1 Loxodonta africana ENSLAFG00000010968 I 0.737
NONO Loxodonta africana ENSLAFG00000013422 I 0.744
SFPQ Loxodonta africana ENSLAFG00000015951 I 0.970
PSPC1 Macropus eugenii ENSMEUG00000000476 I 0.737
NONO Macropus eugenii ENSMEUG00000004294 I 0.744
ENSMEUG00000014082 Macropus eugenii ENSMEUG00000014082 I 0.992
ENSMGAG00000004237 Meleagris gallopavo ENSMGAG00000004237 I 0.752
NONO Meleagris gallopavo ENSMGAG00000008869 I 0.729
NONO Microcebus murinus ENSMICG00000000232 I 0.744
SFPQ Microcebus murinus ENSMICG00000011755 I 0.970
SFPQ Gorilla gorilla ENSGGOG00000026354 I 0.970
ENSGACG00000002034 Gasterosteus aculeatus ENSGACG00000002034 I 0.850
PSPC1 Homo sapiens ENSG00000121390 I 0.737
Q91017_CHICK Gallus gallus ENSGALG00000002514 I 0.970
PSPC1 Felis catus ENSFCAG00000013701 I 0.714
Q5ZIZ5_CHICK Gallus gallus ENSGALG00000005507 I 0.729
PSPC1_CHICK Gallus gallus ENSGALG00000017142 I 0.759
PSPC1 Gorilla gorilla ENSGGOG00000003414 I 0.752
SFPQ Echinops telfairi ENSETEG00000001095 I 0.970
NONO Erinaceus europaeus ENSEEUG00000014404 I 0.744
PSPC1 Vicugna pacos ENSVPAG00000010029 N 0.721
SFPQ Felis catus ENSFCAG00000012305 N 0.985
PSPC1 Meleagris gallopavo ENSMGAG00000015134 N 0.765
PSPC1 Tupaia belangeri ENSTBEG00000002361 N 0.721
SFPQ Sorex araneus ENSSARG00000006409 N 0.985
PSPC1 Ornithorhynchus anatinus ENSOANG00000009017 N 0.721
PSPC1 Microcebus murinus ENSMICG00000013970 N 0.706
PSPC1 Otolemur garnettii ENSOGAG00000012643 N 0.706
LOC100053345 Equus caballus ENSECAG00000017286 N 0.721