CBG15358 (Caenorhabditis briggsae)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 CBG15358 T33921_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
unc-75
M079_0.6 		Caenorhabditis elegans UGUUGUD RNAcompete
Ray et al.(2013)
RNCMPT00081 		0.952
BRUNOL5
M157_0.6 		Homo sapiens UGUGUKK RNAcompete
Ray et al.(2013)
RNCMPT00166 		0.763
BRUNOL6
M178_0.6 		Homo sapiens UGUGDKG RNAcompete
Ray et al.(2013)
RNCMPT00187 		0.730
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
CBG15358 RRM 31 100
CBG15358 RRM 126 194
CBG15358 RRM 432 502

Links

Other RRM family RBPs
Other Caenorhabditis briggsae RBPs

64 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAA81375 Xenopus laevis AAA81375 I 0.725
AAH46942 Xenopus laevis AAH46942 I 0.720
AAH57704 Xenopus laevis AAH57704 I 0.725
AAH72134 Xenopus laevis AAH72134 I 0.725
ACH69784 Xenopus laevis ACH69784 I 0.000
ACH69785 Xenopus laevis ACH69785 I 0.763
Ame_R007421 Ailuropoda melanoleuca Ame_R007421 I 0.720
Ame_R007822 Ailuropoda melanoleuca Ame_R007822 I 0.730
Ame_R011948 Ailuropoda melanoleuca Ame_R011948 I 0.763
B7NZE2_RABIT Oryctolagus cuniculus ENSOCUG00000003551 I 0.720
Bm1_27610 Brugia malayi Bm1_27610 I 0.844
BRUNOL4 Homo sapiens ENSG00000101489 D 0.000
BRUNOL5 Homo sapiens ENSG00000161082 D 0.763
Brunol5 Rattus norvegicus ENSRNOG00000004695 N 0.000
Brunol6 Rattus norvegicus ENSRNOG00000010817 I 0.735
BRUNOL6 Homo sapiens ENSG00000140488 D 0.730
CELF3 Ochotona princeps ENSOPRG00000011130 I 0.000
CELF3 Tetraodon nigroviridis ENSTNIG00000008062 I 0.749
CELF3 Sus scrofa ENSSSCG00000006618 I 0.701
Celf3 Mus musculus ENSMUSG00000028137 I 0.720
CELF3 Monodelphis domestica ENSMODG00000018897 I 0.720
CELF3 Macaca mulatta ENSMMUG00000016952 I 0.000
CELF3 Oryzias latipes ENSORLG00000002630 I 0.000
CELF3 Tursiops truncatus ENSTTRG00000009835 N 0.000
CELF3 Oryzias latipes ENSORLG00000010447 I 0.703
CELF3 Takifugu rubripes ENSTRUG00000014225 I 0.739
CELF3 Procavia capensis ENSPCAG00000001623 I 0.000
CELF3 Pan troglodytes ENSPTRG00000001293 I 0.720
CELF3 Pteropus vampyrus ENSPVAG00000015012 N 0.000
CELF3 Takifugu rubripes ENSTRUG00000012064 I 0.000
CELF3 Microcebus murinus ENSMICG00000010644 N 0.000
CELF3 Gasterosteus aculeatus ENSGACG00000011707 I 0.749
celf3 Danio rerio ENSDARG00000034668 I 0.749
CELF3 Cavia porcellus ENSCPOG00000003539 I 0.720
CELF3 Erinaceus europaeus ENSEEUG00000010622 N 0.000
CELF3 Danio rerio ENSDARG00000006983 I 0.714
CELF3 Homo sapiens ENSG00000159409 I 0.720
CELF3 Gasterosteus aculeatus ENSGACG00000003274 I 0.735
CELF3 Callithrix jacchus ENSCJAG00000007857 I 0.720
CELF3 Canis familiaris ENSCAFG00000012794 I 0.720
CELF3 Dasypus novemcinctus ENSDNOG00000011384 N 0.000
CELF3 Equus caballus ENSECAG00000020365 I 0.720
CELF3 Loxodonta africana ENSLAFG00000030147 I 0.720
CELF3_BOVIN Bos taurus ENSBTAG00000019131 I 0.720
CELF4 Pteropus vampyrus ENSPVAG00000009204 I 0.000
CELF4 Pan troglodytes ENSPTRG00000009982 N 0.000
CELF4 Loxodonta africana ENSLAFG00000021352 I 0.768
CELF4 Takifugu rubripes ENSTRUG00000015481 I 0.744
CELF4 Tursiops truncatus ENSTTRG00000016826 I 0.000
CELF4 Oryzias latipes ENSORLG00000008913 I 0.768
CELF4 Oryctolagus cuniculus ENSOCUG00000024790 I 0.768
CELF4 Gorilla gorilla ENSGGOG00000013920 I 0.000
celf4 Xenopus tropicalis ENSXETG00000020486 I 0.773
Celf4 Mus musculus ENSMUSG00000024268 I 0.763
CELF5 Oryzias latipes ENSORLG00000004600 I 0.744
CELF5 Pan troglodytes ENSPTRG00000010259 I 0.735
celf5 Danio rerio ENSDARG00000071375 I 0.749
celf5 Xenopus tropicalis ENSXETG00000014344 I 0.758
Celf5 Mus musculus ENSMUSG00000034818 N 0.000
CELF6 Bos taurus ENSBTAG00000014092 I 0.730
CELF6 Canis familiaris ENSCAFG00000017695 N 0.000
CELF6 Sus scrofa ENSSSCG00000001928 I 0.730
Celf6 Dipodomys ordii ENSDORG00000004882 I 0.701
CELF6 Loxodonta africana ENSLAFG00000020985 I 0.722
CELF6 Monodelphis domestica ENSMODG00000001784 I 0.749
CELF6 Ornithorhynchus anatinus ENSOANG00000011308 I 0.700
CELF6 Gorilla gorilla ENSGGOG00000015463 I 0.730
CELF6 Oryctolagus cuniculus ENSOCUG00000021663 I 0.000
CELF6 Felis catus ENSFCAG00000016249 I 0.730
Celf6 Mus musculus ENSMUSG00000032297 I 0.735
CELF6 Meleagris gallopavo ENSMGAG00000001804 I 0.729
CELF6 Pteropus vampyrus ENSPVAG00000006406 I 0.730
CELF6 Pan troglodytes ENSPTRG00000034360 I 0.730
CRE09771 Caenorhabditis remanei CRE09771 I 1.000
D4A916_RAT Rattus norvegicus ENSRNOG00000020875 I 0.720
ENSGGOG00000021973 Gorilla gorilla ENSGGOG00000021973 I 0.720
ENSPPYG00000000859 Pongo pygmaeus ENSPPYG00000000859 N 0.000
ENSPPYG00000006615 Pongo pygmaeus ENSPPYG00000006615 I 0.725
ENSPPYG00000009118 Pongo pygmaeus ENSPPYG00000009118 I 0.000
estExt_Genewise1Plus.C_6380019 Capitella teleta estExt_Genewise1Plus.C_6380019 I 0.739
HEXA Macaca mulatta ENSMMUG00000010687 I 0.730
LOC100386457 Callithrix jacchus ENSCJAG00000021135 I 0.000
LOC100414308 Callithrix jacchus ENSCJAG00000018355 I 0.730
NCBI_GNO_7600086 Daphnia pulex NCBI_GNO_7600086 N 0.000
Q7ZWM3 Xenopus laevis Q7ZWM3 I 0.720
Q91579 Xenopus laevis Q91579 I 0.725
unc-75 Caenorhabditis elegans C17D12.2 D 0.952
XP_001192920.1 Strongylocentrotus purpuratus XP_001192920.1 I 0.000
XP_781047.2 Strongylocentrotus purpuratus XP_781047.2 I 0.000