ENSETEG00000018937 (Echinops telfairi)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSETEG00000018937 T37018_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
NCL
M245_0.6 		Homo sapiens CCGAAAKCCCGAAGYAGG SELEX
Cook et al.(2011)
1004_8676391 		0.922
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSETEP00000015385 RRM 308 376
ENSETEP00000015385 RRM 394 459
ENSETEP00000015385 RRM 485 551
ENSETEP00000015385 RRM 571 638

Links

Other RRM family RBPs
Other Echinops telfairi RBPs

32 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R005385 Ailuropoda melanoleuca Ame_R005385 I 0.922
ENSBTAG00000026909 Bos taurus ENSBTAG00000026909 I 0.904
ENSETEG00000014756 Echinops telfairi ENSETEG00000014756 I 0.981
ENSPPYG00000013265 Pongo pygmaeus ENSPPYG00000013265 I 0.822
ENSRNOG00000008664 Rattus norvegicus ENSRNOG00000008664 I 0.848
ENSSSCG00000016275 Sus scrofa ENSSSCG00000016275 I 0.815
ENSTBEG00000001546 Tupaia belangeri ENSTBEG00000001546 I 0.778
ENSTBEG00000002469 Tupaia belangeri ENSTBEG00000002469 I 0.763
LOC100395223 Callithrix jacchus ENSCJAG00000013538 I 0.919
NCL Oryctolagus cuniculus ENSOCUG00000004312 I 0.922
NCL Vicugna pacos ENSVPAG00000001796 I 0.774
NCL Pan troglodytes ENSPTRG00000013025 I 0.922
NCL Pteropus vampyrus ENSPVAG00000000297 I 0.930
NCL Tursiops truncatus ENSTTRG00000009094 I 0.911
Ncl Rattus norvegicus ENSRNOG00000018273 I 0.852
NCL Tarsius syrichta ENSTSYG00000004355 I 0.907
NCL Ornithorhynchus anatinus ENSOANG00000008732 I 0.797
Ncl Mus musculus ENSMUSG00000026234 I 0.852
NCL Monodelphis domestica ENSMODG00000002470 I 0.779
NCL Canis familiaris ENSCAFG00000011037 I 0.919
NCL Choloepus hoffmanni ENSCHOG00000012860 I 0.715
NCL Cavia porcellus ENSCPOG00000001034 I 0.807
Ncl Dipodomys ordii ENSDORG00000012513 I 0.837
NCL Erinaceus europaeus ENSEEUG00000005913 I 0.863
NCL Homo sapiens ENSG00000115053 D 0.922
NCL Gorilla gorilla ENSGGOG00000004300 I 0.922
NCL Loxodonta africana ENSLAFG00000013061 I 0.800
NCL Macropus eugenii ENSMEUG00000012335 I 0.786
NCL Microcebus murinus ENSMICG00000002538 I 0.900
NCL Macaca mulatta ENSMMUG00000018094 I 0.922
NCL Bos taurus ENSBTAG00000016174 I 0.922
Q6X9Z0_HORSE Equus caballus ENSECAG00000021868 I 0.922