Q6X9Z0_HORSE (Equus caballus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSECAG00000021868 T36695_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
NCL
M245_0.6 		Homo sapiens CCGAAAKCCCGAAGYAGG SELEX
Cook et al.(2011)
1004_8676391 		0.970
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSECAP00000019598 RRM 239 307
ENSECAP00000019598 RRM 325 390
ENSECAP00000019598 RRM 418 484
ENSECAP00000019598 RRM 504 571

Links

Other RRM family RBPs
Other Equus caballus RBPs

36 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R005385 Ailuropoda melanoleuca Ame_R005385 I 0.989
NCL Bos taurus ENSBTAG00000016174 I 0.985
NCL Canis familiaris ENSCAFG00000011037 I 0.985
NCL Pteropus vampyrus ENSPVAG00000000297 I 0.978
NCL Tursiops truncatus ENSTTRG00000009094 I 0.978
NCL Macaca mulatta ENSMMUG00000018094 I 0.970
NCL Pan troglodytes ENSPTRG00000013025 I 0.970
NCL Gorilla gorilla ENSGGOG00000004300 I 0.970
NCL Homo sapiens ENSG00000115053 D 0.970
ENSBTAG00000026909 Bos taurus ENSBTAG00000026909 I 0.967
LOC100395223 Callithrix jacchus ENSCJAG00000013538 I 0.967
NCL Oryctolagus cuniculus ENSOCUG00000004312 I 0.963
NCL Tarsius syrichta ENSTSYG00000004355 I 0.956
NCL Microcebus murinus ENSMICG00000002538 I 0.937
ENSETEG00000014756 Echinops telfairi ENSETEG00000014756 I 0.922
ENSETEG00000018937 Echinops telfairi ENSETEG00000018937 I 0.922
NCL Erinaceus europaeus ENSEEUG00000005913 I 0.907
Ncl Rattus norvegicus ENSRNOG00000018273 I 0.885
ENSRNOG00000008664 Rattus norvegicus ENSRNOG00000008664 I 0.885
Ncl Mus musculus ENSMUSG00000026234 I 0.881
Ncl Dipodomys ordii ENSDORG00000012513 I 0.859
NCL Cavia porcellus ENSCPOG00000001034 I 0.856
ENSPPYG00000013265 Pongo pygmaeus ENSPPYG00000013265 I 0.852
ENSSSCG00000016275 Sus scrofa ENSSSCG00000016275 I 0.844
NCL Vicugna pacos ENSVPAG00000001796 I 0.837
NCL Loxodonta africana ENSLAFG00000013061 I 0.830
ENSTBEG00000001546 Tupaia belangeri ENSTBEG00000001546 I 0.822
NCL Ornithorhynchus anatinus ENSOANG00000008732 I 0.815
NCL Macropus eugenii ENSMEUG00000012335 I 0.808
NCL Monodelphis domestica ENSMODG00000002470 I 0.804
ENSTBEG00000002469 Tupaia belangeri ENSTBEG00000002469 I 0.804
NCL Choloepus hoffmanni ENSCHOG00000012860 I 0.763
NCL Sorex araneus ENSSARG00000010007 I 0.737
NUCL_CHICK Gallus gallus ENSGALG00000007705 I 0.723
NCL Meleagris gallopavo ENSMGAG00000008147 I 0.716
ENSGGOG00000022986 Gorilla gorilla ENSGGOG00000022986 I 0.707