ENSBTAG00000026909 (Bos taurus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSBTAG00000026909 T34931_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
NCL
M245_0.6 		Homo sapiens CCGAAAKCCCGAAGYAGG SELEX
Cook et al.(2011)
1004_8676391 		0.956
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSBTAP00000038315 RRM 290 358
ENSBTAP00000038315 RRM 376 438
ENSBTAP00000038315 RRM 462 528
ENSBTAP00000038315 RRM 548 615

Links

Other RRM family RBPs
Other Bos taurus RBPs

35 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
NCL Bos taurus ENSBTAG00000016174 I 0.981
NCL Canis familiaris ENSCAFG00000011037 I 0.967
Q6X9Z0_HORSE Equus caballus ENSECAG00000021868 I 0.967
Ame_R005385 Ailuropoda melanoleuca Ame_R005385 I 0.963
NCL Pteropus vampyrus ENSPVAG00000000297 I 0.963
NCL Tursiops truncatus ENSTTRG00000009094 I 0.959
NCL Homo sapiens ENSG00000115053 D 0.956
NCL Gorilla gorilla ENSGGOG00000004300 I 0.956
NCL Macaca mulatta ENSMMUG00000018094 I 0.956
NCL Pan troglodytes ENSPTRG00000013025 I 0.956
LOC100395223 Callithrix jacchus ENSCJAG00000013538 I 0.952
NCL Oryctolagus cuniculus ENSOCUG00000004312 I 0.948
NCL Tarsius syrichta ENSTSYG00000004355 I 0.944
NCL Microcebus murinus ENSMICG00000002538 I 0.922
ENSETEG00000018937 Echinops telfairi ENSETEG00000018937 I 0.904
ENSETEG00000014756 Echinops telfairi ENSETEG00000014756 I 0.904
NCL Erinaceus europaeus ENSEEUG00000005913 I 0.900
Ncl Rattus norvegicus ENSRNOG00000018273 I 0.878
ENSRNOG00000008664 Rattus norvegicus ENSRNOG00000008664 I 0.874
Ncl Mus musculus ENSMUSG00000026234 I 0.870
Ncl Dipodomys ordii ENSDORG00000012513 I 0.852
ENSPPYG00000013265 Pongo pygmaeus ENSPPYG00000013265 I 0.833
NCL Cavia porcellus ENSCPOG00000001034 I 0.833
ENSSSCG00000016275 Sus scrofa ENSSSCG00000016275 I 0.830
NCL Vicugna pacos ENSVPAG00000001796 I 0.815
NCL Loxodonta africana ENSLAFG00000013061 I 0.811
NCL Macropus eugenii ENSMEUG00000012335 I 0.808
NCL Monodelphis domestica ENSMODG00000002470 I 0.804
NCL Ornithorhynchus anatinus ENSOANG00000008732 I 0.804
ENSTBEG00000001546 Tupaia belangeri ENSTBEG00000001546 I 0.800
ENSTBEG00000002469 Tupaia belangeri ENSTBEG00000002469 I 0.785
NCL Choloepus hoffmanni ENSCHOG00000012860 I 0.756
NCL Sorex araneus ENSSARG00000010007 I 0.749
NUCL_CHICK Gallus gallus ENSGALG00000007705 I 0.712
NCL Meleagris gallopavo ENSMGAG00000008147 I 0.705