ENSMICG00000012083 (Microcebus murinus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSMICG00000012083 T38559_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPA1
M312_0.6 		Homo sapiens Sequence logo not available UAGGGW RIP-chip
Cook et al.(2011)
560_17925491 		0.792
HNRNPA1
M271_0.6 		Homo sapiens UAGGGW SELEX
Cook et al.(2011)
23_7510636 		0.792
HNRNPA1
M022_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00022 		0.792
HNRNPA1L2
M023_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00023 		0.778
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMICP00000010993 RRM 15 83
ENSMICP00000010993 RRM 105 174

Links

Other RRM family RBPs
Other Microcebus murinus RBPs

127 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSCAFG00000017316 Canis familiaris ENSCAFG00000017316 I 0.775
ENSCJAG00000007634 Callithrix jacchus ENSCJAG00000007634 I 0.766
ROA1_BOVIN Bos taurus ENSBTAG00000001553 I 0.760
Q6DTK6_HORSE Equus caballus ENSECAG00000008676 I 0.760
ENSOPRG00000006107 Ochotona princeps ENSOPRG00000006107 I 0.760
ENSGGOG00000025381 Gorilla gorilla ENSGGOG00000025381 I 0.760
Ame_R011792 Ailuropoda melanoleuca Ame_R011792 I 0.760
HNRNPA1 Gorilla gorilla ENSGGOG00000003040 I 0.760
ENSOCUG00000023444 Oryctolagus cuniculus ENSOCUG00000023444 I 0.760
ENSOCUG00000023674 Oryctolagus cuniculus ENSOCUG00000023674 I 0.760
ENSMLUG00000000648 Myotis lucifugus ENSMLUG00000000648 I 0.760
ENSTTRG00000004505 Tursiops truncatus ENSTTRG00000004505 I 0.760
ENSTBEG00000008238 Tupaia belangeri ENSTBEG00000008238 I 0.760
ENSSSCG00000000288 Sus scrofa ENSSSCG00000000288 I 0.760
Hnrnpa1 Rattus norvegicus ENSRNOG00000036839 I 0.760
ENSPVAG00000000322 Pteropus vampyrus ENSPVAG00000000322 I 0.760
HNRNPA1L2 Pan troglodytes ENSPTRG00000032520 I 0.760
ROA1_PANTR Pan troglodytes ENSPTRG00000005035 I 0.760
ROA1_PANTR Pan troglodytes ENSPTRG00000028756 I 0.760
ROA1_PANTR Pan troglodytes ENSPTRG00000031363 I 0.760
ENSG00000215492 Homo sapiens ENSG00000215492 I 0.760
XM_534786.2 Canis familiaris ENSCAFG00000006580 I 0.760
LOC710473 Macaca mulatta ENSMMUG00000007887 I 0.760
ENSEEUG00000006130 Erinaceus europaeus ENSEEUG00000006130 I 0.760
LOC100397230 Callithrix jacchus ENSCJAG00000018864 I 0.760
ENSCJAG00000019479 Callithrix jacchus ENSCJAG00000019479 I 0.760
ENSDNOG00000009228 Dasypus novemcinctus ENSDNOG00000009228 I 0.760
ENSCJAG00000033856 Callithrix jacchus ENSCJAG00000033856 I 0.760
LOC710473 Macaca mulatta ENSMMUG00000012989 I 0.760
ENSFCAG00000010150 Felis catus ENSFCAG00000010150 I 0.760
Hnrnpa1 Mus musculus ENSMUSG00000046434 I 0.760
ENSOCUG00000013350 Oryctolagus cuniculus ENSOCUG00000013350 I 0.760
HNRNPA1 Homo sapiens ENSG00000135486 D 0.760
LOC710473 Macaca mulatta ENSMMUG00000029402 I 0.753
ENSOCUG00000010985 Oryctolagus cuniculus ENSOCUG00000010985 I 0.753
ROA1_MACMU Macaca mulatta ENSMMUG00000031613 I 0.753
ENSLAFG00000029587 Loxodonta africana ENSLAFG00000029587 I 0.753
ENSOCUG00000022568 Oryctolagus cuniculus ENSOCUG00000022568 I 0.753
LOC100397230 Callithrix jacchus ENSCJAG00000004031 I 0.753
LOC710473 Macaca mulatta ENSMMUG00000007928 I 0.752
HNRNPA1L2 Homo sapiens ENSG00000139675 D 0.747
ENSCAFG00000010153 Canis familiaris ENSCAFG00000010153 I 0.747
ENSLAFG00000026657 Loxodonta africana ENSLAFG00000026657 I 0.747
ENSACAG00000007169 Anolis carolinensis ENSACAG00000007169 I 0.747
ENSOGAG00000009945 Otolemur garnettii ENSOGAG00000009945 I 0.747
ENSOCUG00000023322 Oryctolagus cuniculus ENSOCUG00000023322 I 0.747
ENSOCUG00000021007 Oryctolagus cuniculus ENSOCUG00000021007 I 0.747
ENSMLUG00000003232 Myotis lucifugus ENSMLUG00000003232 I 0.747
ENSOCUG00000028124 Oryctolagus cuniculus ENSOCUG00000028124 I 0.747
ENSG00000231942 Homo sapiens ENSG00000231942 I 0.746
ENSCAFG00000011035 Canis familiaris ENSCAFG00000011035 I 0.745
ENSCAFG00000008379 Canis familiaris ENSCAFG00000008379 I 0.745
ENSCAFG00000006784 Canis familiaris ENSCAFG00000006784 I 0.740
ENSMUSG00000021927 Mus musculus ENSMUSG00000021927 I 0.740
ENSRNOG00000039436 Rattus norvegicus ENSRNOG00000039436 I 0.740
D4A491_RAT Rattus norvegicus ENSRNOG00000029531 I 0.740
ENSCPOG00000021077 Cavia porcellus ENSCPOG00000021077 I 0.740
LOC100413454 Callithrix jacchus ENSCJAG00000009030 I 0.740
LOC100409067 Callithrix jacchus ENSCJAG00000003245 I 0.740
ENSPPYG00000017853 Pongo pygmaeus ENSPPYG00000017853 I 0.740
ENSCAFG00000014691 Canis familiaris ENSCAFG00000014691 I 0.739
LOC100054206 Equus caballus ENSECAG00000006699 I 0.738
D4AD23_RAT Rattus norvegicus ENSRNOG00000025891 I 0.738
ENSCAFG00000018456 Canis familiaris ENSCAFG00000018456 I 0.738
ENSMMUG00000022448 Macaca mulatta ENSMMUG00000022448 I 0.734
XM_852631.1 Canis familiaris ENSCAFG00000023680 I 0.733
LOC100410389 Callithrix jacchus ENSCJAG00000023392 I 0.733
ENSCJAG00000031552 Callithrix jacchus ENSCJAG00000031552 I 0.733
ENSOCUG00000021006 Oryctolagus cuniculus ENSOCUG00000021006 I 0.733
ENSMGAG00000007630 Meleagris gallopavo ENSMGAG00000007630 I 0.733
ENSMMUG00000031948 Macaca mulatta ENSMMUG00000031948 I 0.733
ENSCAFG00000007879 Canis familiaris ENSCAFG00000007879 I 0.733
XM_854536.1 Canis familiaris ENSCAFG00000005046 I 0.733
ENSOCUG00000022668 Oryctolagus cuniculus ENSOCUG00000022668 I 0.733
ENSCJAG00000001353 Callithrix jacchus ENSCJAG00000001353 I 0.731
ENSCAFG00000019118 Canis familiaris ENSCAFG00000019118 I 0.731
ENSPPYG00000003855 Pongo pygmaeus ENSPPYG00000003855 I 0.730
ENSCJAG00000005407 Callithrix jacchus ENSCJAG00000005407 I 0.729
ENSEEUG00000000494 Erinaceus europaeus ENSEEUG00000000494 I 0.726
ENSCJAG00000004902 Callithrix jacchus ENSCJAG00000004902 I 0.726
ENSOCUG00000022627 Oryctolagus cuniculus ENSOCUG00000022627 I 0.726
ENSRNOG00000033182 Rattus norvegicus ENSRNOG00000033182 I 0.726
ENSTBEG00000016272 Tupaia belangeri ENSTBEG00000016272 I 0.726
ENSCJAG00000005326 Callithrix jacchus ENSCJAG00000005326 I 0.725
ENSMMUG00000005750 Macaca mulatta ENSMMUG00000005750 I 0.725
ENSMMUG00000008337 Macaca mulatta ENSMMUG00000008337 I 0.725
ENSCAFG00000015319 Canis familiaris ENSCAFG00000015319 I 0.724
ENSCAFG00000020238 Canis familiaris ENSCAFG00000020238 I 0.724
ENSCAFG00000006663 Canis familiaris ENSCAFG00000006663 I 0.722
ENSLAFG00000030769 Loxodonta africana ENSLAFG00000030769 I 0.719
ENSCJAG00000032417 Callithrix jacchus ENSCJAG00000032417 I 0.719
ENSCJAG00000009723 Callithrix jacchus ENSCJAG00000009723 I 0.719
ENSRNOG00000005951 Rattus norvegicus ENSRNOG00000005951 I 0.719
ENSBTAG00000009937 Bos taurus ENSBTAG00000009937 I 0.718
ENSGGOG00000024290 Gorilla gorilla ENSGGOG00000024290 I 0.718
ENSMLUG00000000788 Myotis lucifugus ENSMLUG00000000788 I 0.717
ENSCAFG00000018186 Canis familiaris ENSCAFG00000018186 I 0.717
ENSCAFG00000005308 Canis familiaris ENSCAFG00000005308 I 0.717
ENSOGAG00000017179 Otolemur garnettii ENSOGAG00000017179 I 0.716
XR_011984.1 Macaca mulatta ENSMMUG00000011640 I 0.716
Hnrnpa1 Dipodomys ordii ENSDORG00000010628 I 0.715
ENSSARG00000008946 Sorex araneus ENSSARG00000008946 I 0.715
XM_844664.1 Canis familiaris ENSCAFG00000000687 I 0.715
ENSCJAG00000035202 Callithrix jacchus ENSCJAG00000035202 I 0.712
LOC785445 Bos taurus ENSBTAG00000025621 I 0.712
D4A2D2_RAT Rattus norvegicus ENSRNOG00000021986 I 0.712
ENSCAFG00000024636 Canis familiaris ENSCAFG00000024636 I 0.711
ENSCAFG00000013303 Canis familiaris ENSCAFG00000013303 I 0.711
ENSCAFG00000009412 Canis familiaris ENSCAFG00000009412 I 0.711
ENSMICG00000009289 Microcebus murinus ENSMICG00000009289 I 0.710
ENSCAFG00000004202 Canis familiaris ENSCAFG00000004202 I 0.710
ENSCAFG00000024824 Canis familiaris ENSCAFG00000024824 I 0.710
ENSCJAG00000007639 Callithrix jacchus ENSCJAG00000007639 I 0.710
ENSCAFG00000001973 Canis familiaris ENSCAFG00000001973 I 0.710
ENSMMUG00000004182 Macaca mulatta ENSMMUG00000004182 I 0.707
ENSCJAG00000010169 Callithrix jacchus ENSCJAG00000010169 I 0.705
ENSGGOG00000025827 Gorilla gorilla ENSGGOG00000025827 I 0.705
XM_855847.1 Canis familiaris ENSCAFG00000006327 I 0.705
ENSCJAG00000001737 Callithrix jacchus ENSCJAG00000001737 I 0.705
ENSCJAG00000000095 Callithrix jacchus ENSCJAG00000000095 I 0.705
ENSTBEG00000012511 Tupaia belangeri ENSTBEG00000012511 I 0.705
XM_001106745.1 Macaca mulatta ENSMMUG00000031809 I 0.703
XM_543834.2 Canis familiaris ENSCAFG00000002157 I 0.703
ENSCAFG00000000746 Canis familiaris ENSCAFG00000000746 I 0.703
ENSCAFG00000003418 Canis familiaris ENSCAFG00000003418 I 0.701
ENSMMUG00000013424 Macaca mulatta ENSMMUG00000013424 I 0.701
D4ABW2_RAT Rattus norvegicus ENSRNOG00000032168 I 0.701