ENSMICG00000009289 (Microcebus murinus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSMICG00000009289 T38533_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPA1
M312_0.6 		Homo sapiens Sequence logo not available UAGGGW RIP-chip
Cook et al.(2011)
560_17925491 		0.900
HNRNPA1
M271_0.6 		Homo sapiens UAGGGW SELEX
Cook et al.(2011)
23_7510636 		0.900
HNRNPA1
M022_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00022 		0.900
HNRNPA1L2
M023_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00023 		0.886
HNRNPA2B1
M024_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00024 		0.729
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMICP00000008460 RRM 16 81
ENSMICP00000008460 RRM 106 175

Links

Other RRM family RBPs
Other Microcebus murinus RBPs

250 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSCAFG00000019118 Canis familiaris ENSCAFG00000019118 I 0.871
Q6DTK6_HORSE Equus caballus ENSECAG00000008676 I 0.866
ENSDNOG00000009228 Dasypus novemcinctus ENSDNOG00000009228 I 0.866
ENSOCUG00000023674 Oryctolagus cuniculus ENSOCUG00000023674 I 0.866
XM_534786.2 Canis familiaris ENSCAFG00000006580 I 0.866
ENSOCUG00000013350 Oryctolagus cuniculus ENSOCUG00000013350 I 0.866
ENSPVAG00000000322 Pteropus vampyrus ENSPVAG00000000322 I 0.866
ROA1_PANTR Pan troglodytes ENSPTRG00000005035 I 0.866
ENSCJAG00000033856 Callithrix jacchus ENSCJAG00000033856 I 0.866
ROA1_PANTR Pan troglodytes ENSPTRG00000028756 I 0.866
ENSCJAG00000019479 Callithrix jacchus ENSCJAG00000019479 I 0.866
ROA1_PANTR Pan troglodytes ENSPTRG00000031363 I 0.866
Hnrnpa1 Mus musculus ENSMUSG00000046434 I 0.866
HNRNPA1L2 Pan troglodytes ENSPTRG00000032520 I 0.866
ROA1_BOVIN Bos taurus ENSBTAG00000001553 I 0.866
ENSFCAG00000010150 Felis catus ENSFCAG00000010150 I 0.866
ENSLAFG00000029587 Loxodonta africana ENSLAFG00000029587 I 0.866
Ame_R011792 Ailuropoda melanoleuca Ame_R011792 I 0.866
ENSGGOG00000025381 Gorilla gorilla ENSGGOG00000025381 I 0.866
Hnrnpa1 Rattus norvegicus ENSRNOG00000036839 I 0.866
ENSTTRG00000004505 Tursiops truncatus ENSTTRG00000004505 I 0.866
ENSMLUG00000000648 Myotis lucifugus ENSMLUG00000000648 I 0.866
ENSTBEG00000008238 Tupaia belangeri ENSTBEG00000008238 I 0.866
HNRNPA1 Gorilla gorilla ENSGGOG00000003040 I 0.866
ENSG00000215492 Homo sapiens ENSG00000215492 I 0.866
LOC100397230 Callithrix jacchus ENSCJAG00000018864 I 0.866
HNRNPA1 Homo sapiens ENSG00000135486 D 0.866
LOC710473 Macaca mulatta ENSMMUG00000012989 I 0.866
ENSSSCG00000000288 Sus scrofa ENSSSCG00000000288 I 0.866
LOC100054206 Equus caballus ENSECAG00000006699 I 0.864
ENSOCUG00000022568 Oryctolagus cuniculus ENSOCUG00000022568 I 0.859
LOC100397230 Callithrix jacchus ENSCJAG00000004031 I 0.859
ENSPPYG00000017853 Pongo pygmaeus ENSPPYG00000017853 I 0.859
LOC710473 Macaca mulatta ENSMMUG00000029402 I 0.859
LOC710473 Macaca mulatta ENSMMUG00000007928 I 0.859
LOC710473 Macaca mulatta ENSMMUG00000007887 I 0.859
ENSACAG00000007169 Anolis carolinensis ENSACAG00000007169 I 0.859
ENSOPRG00000006107 Ochotona princeps ENSOPRG00000006107 I 0.859
ENSOCUG00000023444 Oryctolagus cuniculus ENSOCUG00000023444 I 0.859
ROA1_MACMU Macaca mulatta ENSMMUG00000031613 I 0.859
ENSCAFG00000011035 Canis familiaris ENSCAFG00000011035 I 0.857
ENSCAFG00000010153 Canis familiaris ENSCAFG00000010153 I 0.852
LOC100413454 Callithrix jacchus ENSCJAG00000009030 I 0.852
ENSOCUG00000023322 Oryctolagus cuniculus ENSOCUG00000023322 I 0.852
ENSLAFG00000026657 Loxodonta africana ENSLAFG00000026657 I 0.852
ENSOCUG00000010985 Oryctolagus cuniculus ENSOCUG00000010985 I 0.852
HNRNPA1L2 Homo sapiens ENSG00000139675 D 0.852
ENSOGAG00000009945 Otolemur garnettii ENSOGAG00000009945 I 0.852
ENSEEUG00000006130 Erinaceus europaeus ENSEEUG00000006130 I 0.852
ENSOCUG00000021007 Oryctolagus cuniculus ENSOCUG00000021007 I 0.852
ENSOCUG00000021006 Oryctolagus cuniculus ENSOCUG00000021006 I 0.852
ENSOCUG00000022668 Oryctolagus cuniculus ENSOCUG00000022668 I 0.852
ENSOCUG00000028124 Oryctolagus cuniculus ENSOCUG00000028124 I 0.852
ENSMLUG00000003232 Myotis lucifugus ENSMLUG00000003232 I 0.852
ENSCJAG00000001353 Callithrix jacchus ENSCJAG00000001353 I 0.850
ENSMLUG00000000788 Myotis lucifugus ENSMLUG00000000788 I 0.850
ENSCAFG00000020238 Canis familiaris ENSCAFG00000020238 I 0.849
ENSCAFG00000005164 Canis familiaris ENSCAFG00000005164 I 0.848
LOC100410389 Callithrix jacchus ENSCJAG00000023392 I 0.845
ENSRNOG00000005951 Rattus norvegicus ENSRNOG00000005951 I 0.845
XM_852631.1 Canis familiaris ENSCAFG00000023680 I 0.845
LOC100409067 Callithrix jacchus ENSCJAG00000003245 I 0.845
ENSCAFG00000004202 Canis familiaris ENSCAFG00000004202 I 0.843
ENSCAFG00000015319 Canis familiaris ENSCAFG00000015319 I 0.843
ENSCAFG00000019104 Canis familiaris ENSCAFG00000019104 I 0.843
XM_001106745.1 Macaca mulatta ENSMMUG00000031809 I 0.843
ENSCAFG00000001973 Canis familiaris ENSCAFG00000001973 I 0.842
ENSMUSG00000021927 Mus musculus ENSMUSG00000021927 I 0.838
ENSCJAG00000031552 Callithrix jacchus ENSCJAG00000031552 I 0.838
D4A491_RAT Rattus norvegicus ENSRNOG00000029531 I 0.838
ENSCPOG00000021077 Cavia porcellus ENSCPOG00000021077 I 0.838
ENSCAFG00000024951 Canis familiaris ENSCAFG00000024951 I 0.837
XR_010472.1 Macaca mulatta ENSMMUG00000012991 I 0.835
ENSMGAG00000007630 Meleagris gallopavo ENSMGAG00000007630 I 0.832
ENSRNOG00000039436 Rattus norvegicus ENSRNOG00000039436 I 0.831
ENSCJAG00000004902 Callithrix jacchus ENSCJAG00000004902 I 0.831
LOC785445 Bos taurus ENSBTAG00000025621 I 0.831
ENSEEUG00000000494 Erinaceus europaeus ENSEEUG00000000494 I 0.831
ENSCAFG00000007879 Canis familiaris ENSCAFG00000007879 I 0.830
XM_543834.2 Canis familiaris ENSCAFG00000002157 I 0.829
ENSCAFG00000003493 Canis familiaris ENSCAFG00000003493 I 0.827
ENSTBEG00000016272 Tupaia belangeri ENSTBEG00000016272 I 0.824
ENSLAFG00000030769 Loxodonta africana ENSLAFG00000030769 I 0.824
ENSCAFG00000006784 Canis familiaris ENSCAFG00000006784 I 0.824
ENSRNOG00000033182 Rattus norvegicus ENSRNOG00000033182 I 0.824
D4AD23_RAT Rattus norvegicus ENSRNOG00000025891 I 0.824
XM_854536.1 Canis familiaris ENSCAFG00000005046 I 0.824
ENSCAFG00000005308 Canis familiaris ENSCAFG00000005308 I 0.823
ENSCAFG00000018186 Canis familiaris ENSCAFG00000018186 I 0.821
ENSCAFG00000024824 Canis familiaris ENSCAFG00000024824 I 0.820
ENSOCUG00000022627 Oryctolagus cuniculus ENSOCUG00000022627 I 0.817
ENSCJAG00000035202 Callithrix jacchus ENSCJAG00000035202 I 0.817
ENSETEG00000015332 Echinops telfairi ENSETEG00000015332 I 0.816
ENSMODG00000006291 Monodelphis domestica ENSMODG00000006291 I 0.812
ENSCJAG00000032417 Callithrix jacchus ENSCJAG00000032417 I 0.810
hnrnpa1 Xenopus tropicalis ENSXETG00000021277 I 0.810
ENSCJAG00000010169 Callithrix jacchus ENSCJAG00000010169 I 0.810
XM_855847.1 Canis familiaris ENSCAFG00000006327 I 0.810
ENSRNOG00000011100 Rattus norvegicus ENSRNOG00000011100 I 0.810
D4A2D2_RAT Rattus norvegicus ENSRNOG00000021986 I 0.810
ENSTBEG00000012511 Tupaia belangeri ENSTBEG00000012511 I 0.810
ENSMODG00000023422 Monodelphis domestica ENSMODG00000023422 I 0.807
ENSRNOG00000042093 Rattus norvegicus ENSRNOG00000042093 I 0.803
ENSCJAG00000009723 Callithrix jacchus ENSCJAG00000009723 I 0.803
CBU92546 Xenopus laevis CBU92546 I 0.803
CBF67672 Xenopus laevis CBF67672 I 0.803
AAH72090 Xenopus laevis AAH72090 I 0.803
LOC100397230 Callithrix jacchus ENSCJAG00000014791 I 0.803
ENSCJAG00000000095 Callithrix jacchus ENSCJAG00000000095 I 0.803
AAH45260 Xenopus laevis AAH45260 I 0.803
ENSCJAG00000001737 Callithrix jacchus ENSCJAG00000001737 I 0.796
ENSCJAG00000016375 Callithrix jacchus ENSCJAG00000016375 I 0.796
ENSMMUG00000031948 Macaca mulatta ENSMMUG00000031948 I 0.796
ENSMMUG00000007695 Macaca mulatta ENSMMUG00000007695 I 0.796
AAA49742 Xenopus laevis AAA49742 I 0.789
CBF67555 Xenopus laevis CBF67555 I 0.789
AAA49741 Xenopus laevis AAA49741 I 0.789
XP_541811.1 Canis familiaris ENSCAFG00000006586 I 0.789
ENSCJAG00000007250 Callithrix jacchus ENSCJAG00000007250 I 0.789
ENSCAFG00000025274 Canis familiaris ENSCAFG00000025274 I 0.789
ENSGGOG00000025827 Gorilla gorilla ENSGGOG00000025827 I 0.789
P17130 Xenopus laevis P17130 I 0.789
CBU92428 Xenopus laevis CBU92428 I 0.789
ENSCAFG00000007198 Canis familiaris ENSCAFG00000007198 I 0.785
ENSCAFG00000024812 Canis familiaris ENSCAFG00000024812 I 0.784
ENSRNOG00000021280 Rattus norvegicus ENSRNOG00000021280 I 0.782
Ame_R018030 Ailuropoda melanoleuca Ame_R018030 I 0.782
ENSSTOG00000015259 Spermophilus tridecemlineatus ENSSTOG00000015259 I 0.782
ENSCJAG00000033784 Callithrix jacchus ENSCJAG00000033784 I 0.782
Hnrnpa1 Dipodomys ordii ENSDORG00000010628 I 0.782
ENSSARG00000008946 Sorex araneus ENSSARG00000008946 I 0.782
ENSCAFG00000002059 Canis familiaris ENSCAFG00000002059 I 0.782
ENSGACG00000009435 Gasterosteus aculeatus ENSGACG00000009435 I 0.782
ENSLAFG00000029171 Loxodonta africana ENSLAFG00000029171 I 0.780
ENSCAFG00000008301 Canis familiaris ENSCAFG00000008301 I 0.780
ENSPCAG00000001867 Procavia capensis ENSPCAG00000001867 I 0.779
ENSCAFG00000014691 Canis familiaris ENSCAFG00000014691 I 0.778
ENSCJAG00000020672 Callithrix jacchus ENSCJAG00000020672 I 0.775
ENSMMUG00000018397 Macaca mulatta ENSMMUG00000018397 I 0.775
ENSGGOG00000027879 Gorilla gorilla ENSGGOG00000027879 I 0.775
ENSCJAG00000017130 Callithrix jacchus ENSCJAG00000017130 I 0.775
ENSCJAG00000001302 Callithrix jacchus ENSCJAG00000001302 I 0.771
ENSCAFG00000016707 Canis familiaris ENSCAFG00000016707 I 0.770
ENSCAFG00000005207 Canis familiaris ENSCAFG00000005207 I 0.768
ENSCJAG00000007639 Callithrix jacchus ENSCJAG00000007639 I 0.768
HNRPA3 Gallus gallus ENSGALG00000009250 I 0.768
HNRNPA3 Anolis carolinensis ENSACAG00000012234 I 0.768
HNRNPA3 Meleagris gallopavo ENSMGAG00000009565 I 0.768
ENSORLG00000008001 Oryzias latipes ENSORLG00000008001 I 0.768
HNRNPA3 Taeniopygia guttata ENSTGUG00000008996 I 0.768
ENSCAFG00000017316 Canis familiaris ENSCAFG00000017316 I 0.767
ENSCAFG00000023056 Canis familiaris ENSCAFG00000023056 I 0.764
ENSMMUG00000008337 Macaca mulatta ENSMMUG00000008337 I 0.764
ENSCAFG00000013932 Canis familiaris ENSCAFG00000013932 I 0.763
ENSCPOG00000004251 Cavia porcellus ENSCPOG00000004251 I 0.762
HNRNPA3 Gorilla gorilla ENSGGOG00000006130 I 0.762
ENSMMUG00000001858 Macaca mulatta ENSMMUG00000001858 I 0.762
HNRNPA3 Macropus eugenii ENSMEUG00000013622 I 0.762
HNRNPA3 Myotis lucifugus ENSMLUG00000003906 I 0.762
HNRNPA3 Homo sapiens ENSG00000170144 I 0.762
HNRNPA3 Dasypus novemcinctus ENSDNOG00000019022 I 0.762
Hnrnpa3 Mus musculus ENSMUSG00000059005 I 0.762
HNRNPA3 Cavia porcellus ENSCPOG00000011301 I 0.762
HNRNPA3 Monodelphis domestica ENSMODG00000019803 I 0.762
LOC100411573 Callithrix jacchus ENSCJAG00000023383 I 0.762
HNRNPA3 Pan troglodytes ENSPTRG00000012676 I 0.762
ENSCAFG00000013497 Canis familiaris ENSCAFG00000013497 I 0.762
LOC100360986 Rattus norvegicus ENSRNOG00000001556 I 0.762
HNRNPA3 Tursiops truncatus ENSTTRG00000014225 I 0.762
HNRNPA3 Pteropus vampyrus ENSPVAG00000010380 I 0.762
LOC781499 Bos taurus ENSBTAG00000021580 I 0.762
ROA3_RAT Rattus norvegicus ENSRNOG00000027001 I 0.762
HNRNPA3 Sus scrofa ENSSSCG00000015988 I 0.762
HNRNPA3 Felis catus ENSFCAG00000012146 I 0.761
LOC100066794 Equus caballus ENSECAG00000023237 I 0.761
XP_848548.1 Canis familiaris ENSCAFG00000016313 I 0.761
ENSRNOG00000023438 Rattus norvegicus ENSRNOG00000023438 I 0.761
Gm8991 Mus musculus ENSMUSG00000059179 I 0.761
ENSCAFG00000014094 Canis familiaris ENSCAFG00000014094 I 0.761
hnrnpa3 Xenopus tropicalis ENSXETG00000001806 I 0.761
ENSSSCG00000005428 Sus scrofa ENSSSCG00000005428 I 0.761
HNRNPA3 Oryctolagus cuniculus ENSOCUG00000002743 I 0.755
ENSMMUG00000013424 Macaca mulatta ENSMMUG00000013424 I 0.755
ENSCAFG00000009412 Canis familiaris ENSCAFG00000009412 I 0.755
D3ZXA3_RAT Rattus norvegicus ENSRNOG00000038905 I 0.754
P51968 Xenopus laevis P51968 I 0.754
ENSGGOG00000025265 Gorilla gorilla ENSGGOG00000025265 I 0.754
AAA49949 Xenopus laevis AAA49949 I 0.754
ENSMMUG00000022448 Macaca mulatta ENSMMUG00000022448 I 0.752
ENSCAFG00000006386 Canis familiaris ENSCAFG00000006386 I 0.750
ENSEEUG00000009941 Erinaceus europaeus ENSEEUG00000009941 I 0.746
XR_011984.1 Macaca mulatta ENSMMUG00000011640 I 0.746
CBF67578 Xenopus laevis CBF67578 I 0.743
ENSMMUG00000004528 Macaca mulatta ENSMMUG00000004528 I 0.743
CBU92451 Xenopus laevis CBU92451 I 0.743
AAA49950 Xenopus laevis AAA49950 I 0.743
P51992 Xenopus laevis P51992 I 0.743
AAI69881 Xenopus laevis AAI69881 I 0.743
ENSCAFG00000007918 Canis familiaris ENSCAFG00000007918 I 0.743
ENSCAFG00000000746 Canis familiaris ENSCAFG00000000746 I 0.741
ENSCAFG00000006663 Canis familiaris ENSCAFG00000006663 I 0.740
Q1KKU4_FUGRU Takifugu rubripes ENSTRUG00000002190 I 0.739
D3ZTB7_RAT Rattus norvegicus ENSRNOG00000031608 I 0.739
ENSEEUG00000011837 Erinaceus europaeus ENSEEUG00000011837 I 0.739
hnrnpa1 Danio rerio ENSDARG00000036675 I 0.739
ENSCJAG00000032970 Callithrix jacchus ENSCJAG00000032970 I 0.739
ENSMMUG00000004182 Macaca mulatta ENSMMUG00000004182 I 0.738
ENSCAFG00000017494 Canis familiaris ENSCAFG00000017494 I 0.736
ENSCAFG00000013303 Canis familiaris ENSCAFG00000013303 I 0.736
ENSPPYG00000003855 Pongo pygmaeus ENSPPYG00000003855 I 0.736
ENSCJAG00000005326 Callithrix jacchus ENSCJAG00000005326 I 0.734
ENSTNIG00000015047 Tetraodon nigroviridis ENSTNIG00000015047 I 0.732
D4ABW2_RAT Rattus norvegicus ENSRNOG00000032168 I 0.731
HNRNPA3 Microcebus murinus ENSMICG00000005513 I 0.730
ENSCAFG00000008379 Canis familiaris ENSCAFG00000008379 I 0.729
ENSMMUG00000005750 Macaca mulatta ENSMMUG00000005750 I 0.729
ENSCAFG00000006036 Canis familiaris ENSCAFG00000006036 I 0.729
ENSPPYG00000012967 Pongo pygmaeus ENSPPYG00000012967 I 0.727
ENSGGOG00000022797 Gorilla gorilla ENSGGOG00000022797 I 0.727
XM_844664.1 Canis familiaris ENSCAFG00000000687 I 0.726
ENSCJAG00000005407 Callithrix jacchus ENSCJAG00000005407 I 0.726
ENSGGOG00000025446 Gorilla gorilla ENSGGOG00000025446 I 0.725
ENSPTRG00000018253 Pan troglodytes ENSPTRG00000018253 I 0.725
ENSCAFG00000019097 Canis familiaris ENSCAFG00000019097 I 0.721
ENSCJAG00000008584 Callithrix jacchus ENSCJAG00000008584 I 0.720
ENSPPYG00000001012 Pongo pygmaeus ENSPPYG00000001012 I 0.720
ENSSARG00000008882 Sorex araneus ENSSARG00000008882 I 0.718
zgc:66127 Danio rerio ENSDARG00000011020 I 0.718
ENSOGAG00000017179 Otolemur garnettii ENSOGAG00000017179 I 0.715
ENSG00000231942 Homo sapiens ENSG00000231942 I 0.715
ENSCAFG00000024636 Canis familiaris ENSCAFG00000024636 I 0.715
ENSCAFG00000018580 Canis familiaris ENSCAFG00000018580 I 0.713
HNRNPA3 Sorex araneus ENSSARG00000007605 I 0.711
hnrnpa3 Danio rerio ENSDARG00000059351 I 0.711
ENSMICG00000012083 Microcebus murinus ENSMICG00000012083 I 0.710
ENSBTAG00000009937 Bos taurus ENSBTAG00000009937 I 0.710
ENSCJAG00000007634 Callithrix jacchus ENSCJAG00000007634 I 0.710
ENSCAFG00000009606 Canis familiaris ENSCAFG00000009606 I 0.710
ENSCAFG00000005307 Canis familiaris ENSCAFG00000005307 I 0.709
D3ZNE1_RAT Rattus norvegicus ENSRNOG00000005671 I 0.708
ENSETEG00000018059 Echinops telfairi ENSETEG00000018059 I 0.708
ENSCAFG00000018456 Canis familiaris ENSCAFG00000018456 I 0.705
ENSCJAG00000006928 Callithrix jacchus ENSCJAG00000006928 I 0.704
ENSPPYG00000016683 Pongo pygmaeus ENSPPYG00000016683 I 0.704
ENSGGOG00000022020 Gorilla gorilla ENSGGOG00000022020 I 0.704
ENSRNOG00000030250 Rattus norvegicus ENSRNOG00000030250 I 0.703
ENSETEG00000001872 Echinops telfairi ENSETEG00000001872 I 0.703
ENSGGOG00000027762 Gorilla gorilla ENSGGOG00000027762 I 0.702
ENSGGOG00000024290 Gorilla gorilla ENSGGOG00000024290 I 0.701
ENSMODG00000002376 Monodelphis domestica ENSMODG00000002376 I 0.701