ENSCAFG00000000746 (Canis familiaris)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCAFG00000000746 T34971_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPA1
M312_0.6 		Homo sapiens Sequence logo not available UAGGGW RIP-chip
Cook et al.(2011)
560_17925491 		0.793
HNRNPA1
M271_0.6 		Homo sapiens UAGGGW SELEX
Cook et al.(2011)
23_7510636 		0.793
HNRNPA1
M022_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00022 		0.793
HNRNPA1L2
M023_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00023 		0.772
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCAFP00000001052 RRM 16 86
ENSCAFP00000001052 RRM 105 175

Links

Other RRM family RBPs
Other Canis familiaris RBPs

151 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSCAFG00000014691 Canis familiaris ENSCAFG00000014691 I 0.776
XM_844664.1 Canis familiaris ENSCAFG00000000687 I 0.772
ENSG00000215492 Homo sapiens ENSG00000215492 I 0.764
HNRNPA1 Homo sapiens ENSG00000135486 D 0.764
HNRNPA1L2 Pan troglodytes ENSPTRG00000032520 I 0.764
HNRNPA1 Gorilla gorilla ENSGGOG00000003040 I 0.764
ENSPVAG00000000322 Pteropus vampyrus ENSPVAG00000000322 I 0.764
ENSOCUG00000013350 Oryctolagus cuniculus ENSOCUG00000013350 I 0.764
ENSLAFG00000029587 Loxodonta africana ENSLAFG00000029587 I 0.764
ENSGGOG00000025381 Gorilla gorilla ENSGGOG00000025381 I 0.764
ROA1_PANTR Pan troglodytes ENSPTRG00000031363 I 0.764
ENSFCAG00000010150 Felis catus ENSFCAG00000010150 I 0.764
LOC100397230 Callithrix jacchus ENSCJAG00000018864 I 0.764
ENSCJAG00000019479 Callithrix jacchus ENSCJAG00000019479 I 0.764
ENSCJAG00000033856 Callithrix jacchus ENSCJAG00000033856 I 0.764
ENSOCUG00000023674 Oryctolagus cuniculus ENSOCUG00000023674 I 0.764
ENSOPRG00000006107 Ochotona princeps ENSOPRG00000006107 I 0.764
ROA1_PANTR Pan troglodytes ENSPTRG00000005035 I 0.764
Q6DTK6_HORSE Equus caballus ENSECAG00000008676 I 0.764
ENSDNOG00000009228 Dasypus novemcinctus ENSDNOG00000009228 I 0.764
ROA1_PANTR Pan troglodytes ENSPTRG00000028756 I 0.764
Hnrnpa1 Rattus norvegicus ENSRNOG00000036839 I 0.764
ENSTTRG00000004505 Tursiops truncatus ENSTTRG00000004505 I 0.764
Hnrnpa1 Mus musculus ENSMUSG00000046434 I 0.764
ENSMLUG00000000648 Myotis lucifugus ENSMLUG00000000648 I 0.764
Ame_R011792 Ailuropoda melanoleuca Ame_R011792 I 0.764
ROA1_BOVIN Bos taurus ENSBTAG00000001553 I 0.764
LOC710473 Macaca mulatta ENSMMUG00000012989 I 0.764
LOC710473 Macaca mulatta ENSMMUG00000007887 I 0.764
ENSTBEG00000008238 Tupaia belangeri ENSTBEG00000008238 I 0.764
XM_534786.2 Canis familiaris ENSCAFG00000006580 I 0.764
ENSSSCG00000000288 Sus scrofa ENSSSCG00000000288 I 0.764
ENSMMUG00000008337 Macaca mulatta ENSMMUG00000008337 I 0.762
ENSCAFG00000003418 Canis familiaris ENSCAFG00000003418 I 0.762
ENSCAFG00000001973 Canis familiaris ENSCAFG00000001973 I 0.762
ENSACAG00000007169 Anolis carolinensis ENSACAG00000007169 I 0.757
ENSCAFG00000010153 Canis familiaris ENSCAFG00000010153 I 0.757
ENSOGAG00000009945 Otolemur garnettii ENSOGAG00000009945 I 0.757
ROA1_MACMU Macaca mulatta ENSMMUG00000031613 I 0.757
ENSOCUG00000023444 Oryctolagus cuniculus ENSOCUG00000023444 I 0.757
LOC100413454 Callithrix jacchus ENSCJAG00000009030 I 0.757
LOC100397230 Callithrix jacchus ENSCJAG00000004031 I 0.757
LOC710473 Macaca mulatta ENSMMUG00000029402 I 0.757
ENSLAFG00000026657 Loxodonta africana ENSLAFG00000026657 I 0.757
ENSOCUG00000022568 Oryctolagus cuniculus ENSOCUG00000022568 I 0.757
ENSCAFG00000008379 Canis familiaris ENSCAFG00000008379 I 0.755
ENSCAFG00000006663 Canis familiaris ENSCAFG00000006663 I 0.755
ENSCAFG00000011035 Canis familiaris ENSCAFG00000011035 I 0.755
ENSCAFG00000017316 Canis familiaris ENSCAFG00000017316 I 0.752
ENSOCUG00000023322 Oryctolagus cuniculus ENSOCUG00000023322 I 0.750
ENSEEUG00000006130 Erinaceus europaeus ENSEEUG00000006130 I 0.750
ENSOCUG00000021007 Oryctolagus cuniculus ENSOCUG00000021007 I 0.750
ENSMLUG00000003232 Myotis lucifugus ENSMLUG00000003232 I 0.750
ENSOCUG00000010985 Oryctolagus cuniculus ENSOCUG00000010985 I 0.750
ENSOCUG00000028124 Oryctolagus cuniculus ENSOCUG00000028124 I 0.750
LOC100409067 Callithrix jacchus ENSCJAG00000003245 I 0.750
LOC100410389 Callithrix jacchus ENSCJAG00000023392 I 0.750
ENSMLUG00000000788 Myotis lucifugus ENSMLUG00000000788 I 0.748
ENSMMUG00000004528 Macaca mulatta ENSMMUG00000004528 I 0.748
ENSCAFG00000023056 Canis familiaris ENSCAFG00000023056 I 0.748
ENSMMUG00000013424 Macaca mulatta ENSMMUG00000013424 I 0.745
ENSPPYG00000017853 Pongo pygmaeus ENSPPYG00000017853 I 0.743
ENSCPOG00000021077 Cavia porcellus ENSCPOG00000021077 I 0.743
LOC710473 Macaca mulatta ENSMMUG00000007928 I 0.743
HNRNPA1L2 Homo sapiens ENSG00000139675 D 0.743
ENSMUSG00000021927 Mus musculus ENSMUSG00000021927 I 0.743
ENSMMUG00000022448 Macaca mulatta ENSMMUG00000022448 I 0.743
ENSMICG00000009289 Microcebus murinus ENSMICG00000009289 I 0.741
ENSCAFG00000004202 Canis familiaris ENSCAFG00000004202 I 0.741
ENSCAFG00000019118 Canis familiaris ENSCAFG00000019118 I 0.741
XM_852631.1 Canis familiaris ENSCAFG00000023680 I 0.741
ENSCJAG00000001353 Callithrix jacchus ENSCJAG00000001353 I 0.741
LOC100054206 Equus caballus ENSECAG00000006699 I 0.741
ENSCAFG00000003493 Canis familiaris ENSCAFG00000003493 I 0.741
ENSCAFG00000015319 Canis familiaris ENSCAFG00000015319 I 0.740
ENSCAFG00000006784 Canis familiaris ENSCAFG00000006784 I 0.736
ENSCAFG00000007879 Canis familiaris ENSCAFG00000007879 I 0.736
ENSOCUG00000022668 Oryctolagus cuniculus ENSOCUG00000022668 I 0.736
ENSOCUG00000021006 Oryctolagus cuniculus ENSOCUG00000021006 I 0.736
ENSCJAG00000031552 Callithrix jacchus ENSCJAG00000031552 I 0.736
D4A491_RAT Rattus norvegicus ENSRNOG00000029531 I 0.736
ENSCAFG00000020238 Canis familiaris ENSCAFG00000020238 I 0.735
ENSPPYG00000003855 Pongo pygmaeus ENSPPYG00000003855 I 0.734
ENSMMUG00000005750 Macaca mulatta ENSMMUG00000005750 I 0.734
XR_011984.1 Macaca mulatta ENSMMUG00000011640 I 0.734
ENSMGAG00000007630 Meleagris gallopavo ENSMGAG00000007630 I 0.732
ENSRNOG00000033182 Rattus norvegicus ENSRNOG00000033182 I 0.730
XM_854536.1 Canis familiaris ENSCAFG00000005046 I 0.730
ENSRNOG00000039436 Rattus norvegicus ENSRNOG00000039436 I 0.730
LOC785445 Bos taurus ENSBTAG00000025621 I 0.730
ENSEEUG00000000494 Erinaceus europaeus ENSEEUG00000000494 I 0.730
ENSCAFG00000018456 Canis familiaris ENSCAFG00000018456 I 0.729
ENSCJAG00000017019 Callithrix jacchus ENSCJAG00000017019 I 0.729
ENSCAFG00000009412 Canis familiaris ENSCAFG00000009412 I 0.729
ENSETEG00000001872 Echinops telfairi ENSETEG00000001872 I 0.726
ENSMODG00000006291 Monodelphis domestica ENSMODG00000006291 I 0.725
ENSCJAG00000005407 Callithrix jacchus ENSCJAG00000005407 I 0.724
ENSTBEG00000016272 Tupaia belangeri ENSTBEG00000016272 I 0.723
ENSGGOG00000025827 Gorilla gorilla ENSGGOG00000025827 I 0.723
ENSCAFG00000024951 Canis familiaris ENSCAFG00000024951 I 0.723
ENSCJAG00000004902 Callithrix jacchus ENSCJAG00000004902 I 0.723
ENSETEG00000015332 Echinops telfairi ENSETEG00000015332 I 0.723
ENSCAFG00000005164 Canis familiaris ENSCAFG00000005164 I 0.723
ENSLAFG00000030769 Loxodonta africana ENSLAFG00000030769 I 0.723
ENSMMUG00000004182 Macaca mulatta ENSMMUG00000004182 I 0.721
ENSCAFG00000018186 Canis familiaris ENSCAFG00000018186 I 0.721
D4AD23_RAT Rattus norvegicus ENSRNOG00000025891 I 0.721
ENSOGAG00000017179 Otolemur garnettii ENSOGAG00000017179 I 0.720
ENSCAFG00000007918 Canis familiaris ENSCAFG00000007918 I 0.719
ENSCAFG00000024824 Canis familiaris ENSCAFG00000024824 I 0.719
ENSCJAG00000007634 Callithrix jacchus ENSCJAG00000007634 I 0.717
ENSRNOG00000005951 Rattus norvegicus ENSRNOG00000005951 I 0.716
ENSCJAG00000010169 Callithrix jacchus ENSCJAG00000010169 I 0.716
ENSCJAG00000032417 Callithrix jacchus ENSCJAG00000032417 I 0.716
ENSTBEG00000012511 Tupaia belangeri ENSTBEG00000012511 I 0.716
ENSCJAG00000035202 Callithrix jacchus ENSCJAG00000035202 I 0.716
ENSOCUG00000022627 Oryctolagus cuniculus ENSOCUG00000022627 I 0.716
XR_010472.1 Macaca mulatta ENSMMUG00000012991 I 0.714
XM_543834.2 Canis familiaris ENSCAFG00000002157 I 0.714
ENSG00000231942 Homo sapiens ENSG00000231942 I 0.713
hnrnpa1 Xenopus tropicalis ENSXETG00000021277 I 0.709
ENSCJAG00000007250 Callithrix jacchus ENSCJAG00000007250 I 0.709
D4A2D2_RAT Rattus norvegicus ENSRNOG00000021986 I 0.709
ENSCJAG00000000095 Callithrix jacchus ENSCJAG00000000095 I 0.709
ENSCJAG00000009723 Callithrix jacchus ENSCJAG00000009723 I 0.709
ENSBTAG00000009937 Bos taurus ENSBTAG00000009937 I 0.708
ENSCAFG00000019104 Canis familiaris ENSCAFG00000019104 I 0.707
XM_001106745.1 Macaca mulatta ENSMMUG00000031809 I 0.707
ENSCAFG00000017494 Canis familiaris ENSCAFG00000017494 I 0.706
ENSCAFG00000006036 Canis familiaris ENSCAFG00000006036 I 0.706
ENSCAFG00000018580 Canis familiaris ENSCAFG00000018580 I 0.706
HNRNPA2B1 Taeniopygia guttata ENSTGUG00000002869 I 0.706
ENSCAFG00000003921 Canis familiaris ENSCAFG00000003921 I 0.704
ENSMICG00000012083 Microcebus murinus ENSMICG00000012083 I 0.703
D4ABW2_RAT Rattus norvegicus ENSRNOG00000032168 I 0.703
CBF67672 Xenopus laevis CBF67672 I 0.703
AAH72090 Xenopus laevis AAH72090 I 0.703
ENSCAFG00000005308 Canis familiaris ENSCAFG00000005308 I 0.703
ENSMMUG00000007695 Macaca mulatta ENSMMUG00000007695 I 0.703
AAH45260 Xenopus laevis AAH45260 I 0.703
CBU92546 Xenopus laevis CBU92546 I 0.703
ENSGGOG00000025265 Gorilla gorilla ENSGGOG00000025265 I 0.703
ENSCJAG00000016375 Callithrix jacchus ENSCJAG00000016375 I 0.703
ENSCAFG00000008301 Canis familiaris ENSCAFG00000008301 I 0.703
LOC100397230 Callithrix jacchus ENSCJAG00000014791 I 0.703
XP_541811.1 Canis familiaris ENSCAFG00000006586 I 0.703
ENSMMUG00000031948 Macaca mulatta ENSMMUG00000031948 I 0.703
XM_855847.1 Canis familiaris ENSCAFG00000006327 I 0.703
D4AB76_RAT Rattus norvegicus ENSRNOG00000032584 I 0.701
ENSEEUG00000000925 Erinaceus europaeus ENSEEUG00000000925 I 0.701
ENSCAFG00000019097 Canis familiaris ENSCAFG00000019097 I 0.701