ENSCAFG00000009412 (Canis familiaris)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCAFG00000009412 T35078_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPA1
M312_0.6 		Homo sapiens Sequence logo not available UAGGGW RIP-chip
Cook et al.(2011)
560_17925491 		0.838
HNRNPA1
M271_0.6 		Homo sapiens UAGGGW SELEX
Cook et al.(2011)
23_7510636 		0.838
HNRNPA1
M022_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00022 		0.838
HNRNPA1L2
M023_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00023 		0.824
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCAFP00000013858 RRM 4 72
ENSCAFP00000013858 RRM 94 163

Links

Other RRM family RBPs
Other Canis familiaris RBPs

265 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSCAFG00000011035 Canis familiaris ENSCAFG00000011035 I 0.825
ENSCAFG00000014691 Canis familiaris ENSCAFG00000014691 I 0.816
Hnrnpa1 Mus musculus ENSMUSG00000046434 I 0.812
LOC710473 Macaca mulatta ENSMMUG00000012989 I 0.812
ENSOCUG00000013350 Oryctolagus cuniculus ENSOCUG00000013350 I 0.812
ENSCJAG00000033856 Callithrix jacchus ENSCJAG00000033856 I 0.812
ENSOCUG00000023674 Oryctolagus cuniculus ENSOCUG00000023674 I 0.812
ENSCJAG00000019479 Callithrix jacchus ENSCJAG00000019479 I 0.812
LOC710473 Macaca mulatta ENSMMUG00000007887 I 0.812
ENSMLUG00000000648 Myotis lucifugus ENSMLUG00000000648 I 0.812
HNRNPA1 Homo sapiens ENSG00000135486 D 0.812
ENSFCAG00000010150 Felis catus ENSFCAG00000010150 I 0.812
ENSG00000215492 Homo sapiens ENSG00000215492 I 0.812
HNRNPA1 Gorilla gorilla ENSGGOG00000003040 I 0.812
ENSDNOG00000009228 Dasypus novemcinctus ENSDNOG00000009228 I 0.812
LOC100397230 Callithrix jacchus ENSCJAG00000018864 I 0.812
ROA1_PANTR Pan troglodytes ENSPTRG00000028756 I 0.812
ENSTTRG00000004505 Tursiops truncatus ENSTTRG00000004505 I 0.812
ENSTBEG00000008238 Tupaia belangeri ENSTBEG00000008238 I 0.812
Ame_R011792 Ailuropoda melanoleuca Ame_R011792 I 0.812
ROA1_BOVIN Bos taurus ENSBTAG00000001553 I 0.812
XM_534786.2 Canis familiaris ENSCAFG00000006580 I 0.812
ROA1_PANTR Pan troglodytes ENSPTRG00000005035 I 0.812
ENSSSCG00000000288 Sus scrofa ENSSSCG00000000288 I 0.812
Q6DTK6_HORSE Equus caballus ENSECAG00000008676 I 0.812
ROA1_PANTR Pan troglodytes ENSPTRG00000031363 I 0.812
HNRNPA1L2 Pan troglodytes ENSPTRG00000032520 I 0.812
Hnrnpa1 Rattus norvegicus ENSRNOG00000036839 I 0.812
ENSPVAG00000000322 Pteropus vampyrus ENSPVAG00000000322 I 0.812
ENSCAFG00000001973 Canis familiaris ENSCAFG00000001973 I 0.811
ENSOPRG00000006107 Ochotona princeps ENSOPRG00000006107 I 0.806
ENSOCUG00000023444 Oryctolagus cuniculus ENSOCUG00000023444 I 0.806
ENSOCUG00000022568 Oryctolagus cuniculus ENSOCUG00000022568 I 0.806
ENSLAFG00000029587 Loxodonta africana ENSLAFG00000029587 I 0.806
LOC710473 Macaca mulatta ENSMMUG00000029402 I 0.806
LOC100409067 Callithrix jacchus ENSCJAG00000003245 I 0.806
LOC100397230 Callithrix jacchus ENSCJAG00000004031 I 0.806
ENSCAFG00000010153 Canis familiaris ENSCAFG00000010153 I 0.806
ENSOCUG00000021007 Oryctolagus cuniculus ENSOCUG00000021007 I 0.799
ENSOCUG00000023322 Oryctolagus cuniculus ENSOCUG00000023322 I 0.799
ENSOGAG00000009945 Otolemur garnettii ENSOGAG00000009945 I 0.799
ENSEEUG00000006130 Erinaceus europaeus ENSEEUG00000006130 I 0.799
ENSOCUG00000028124 Oryctolagus cuniculus ENSOCUG00000028124 I 0.799
ENSMLUG00000003232 Myotis lucifugus ENSMLUG00000003232 I 0.799
ENSACAG00000007169 Anolis carolinensis ENSACAG00000007169 I 0.799
ENSCAFG00000006784 Canis familiaris ENSCAFG00000006784 I 0.799
ENSCAFG00000007879 Canis familiaris ENSCAFG00000007879 I 0.799
HNRNPA1L2 Homo sapiens ENSG00000139675 D 0.799
LOC100413454 Callithrix jacchus ENSCJAG00000009030 I 0.799
ENSOCUG00000010985 Oryctolagus cuniculus ENSOCUG00000010985 I 0.799
ENSGGOG00000025381 Gorilla gorilla ENSGGOG00000025381 I 0.799
ENSCAFG00000020238 Canis familiaris ENSCAFG00000020238 I 0.797
LOC710473 Macaca mulatta ENSMMUG00000007928 I 0.792
ENSLAFG00000026657 Loxodonta africana ENSLAFG00000026657 I 0.792
ROA1_MACMU Macaca mulatta ENSMMUG00000031613 I 0.792
ENSMUSG00000021927 Mus musculus ENSMUSG00000021927 I 0.792
XM_852631.1 Canis familiaris ENSCAFG00000023680 I 0.792
ENSCJAG00000031552 Callithrix jacchus ENSCJAG00000031552 I 0.792
XM_854536.1 Canis familiaris ENSCAFG00000005046 I 0.792
ENSCAFG00000015319 Canis familiaris ENSCAFG00000015319 I 0.790
ENSMLUG00000000788 Myotis lucifugus ENSMLUG00000000788 I 0.790
ENSCAFG00000003493 Canis familiaris ENSCAFG00000003493 I 0.790
LOC100054206 Equus caballus ENSECAG00000006699 I 0.790
ENSCAFG00000004202 Canis familiaris ENSCAFG00000004202 I 0.790
ENSCAFG00000019118 Canis familiaris ENSCAFG00000019118 I 0.790
LOC100410389 Callithrix jacchus ENSCJAG00000023392 I 0.785
ENSCPOG00000021077 Cavia porcellus ENSCPOG00000021077 I 0.785
ENSOCUG00000022668 Oryctolagus cuniculus ENSOCUG00000022668 I 0.785
ENSPPYG00000017853 Pongo pygmaeus ENSPPYG00000017853 I 0.785
ENSCJAG00000001353 Callithrix jacchus ENSCJAG00000001353 I 0.783
ENSRNOG00000039436 Rattus norvegicus ENSRNOG00000039436 I 0.778
D4A491_RAT Rattus norvegicus ENSRNOG00000029531 I 0.778
ENSRNOG00000033182 Rattus norvegicus ENSRNOG00000033182 I 0.778
ENSOCUG00000021006 Oryctolagus cuniculus ENSOCUG00000021006 I 0.778
ENSMGAG00000007630 Meleagris gallopavo ENSMGAG00000007630 I 0.772
ENSCAFG00000005308 Canis familiaris ENSCAFG00000005308 I 0.771
ENSTBEG00000016272 Tupaia belangeri ENSTBEG00000016272 I 0.771
ENSCJAG00000010169 Callithrix jacchus ENSCJAG00000010169 I 0.771
ENSEEUG00000000494 Erinaceus europaeus ENSEEUG00000000494 I 0.771
D4AD23_RAT Rattus norvegicus ENSRNOG00000025891 I 0.769
XM_844664.1 Canis familiaris ENSCAFG00000000687 I 0.769
XR_010472.1 Macaca mulatta ENSMMUG00000012991 I 0.769
ENSMODG00000006291 Monodelphis domestica ENSMODG00000006291 I 0.767
ENSTBEG00000012511 Tupaia belangeri ENSTBEG00000012511 I 0.764
ENSCJAG00000016375 Callithrix jacchus ENSCJAG00000016375 I 0.764
ENSLAFG00000030769 Loxodonta africana ENSLAFG00000030769 I 0.764
LOC785445 Bos taurus ENSBTAG00000025621 I 0.764
ENSCJAG00000035202 Callithrix jacchus ENSCJAG00000035202 I 0.764
LOC100397230 Callithrix jacchus ENSCJAG00000014791 I 0.764
ENSCJAG00000009723 Callithrix jacchus ENSCJAG00000009723 I 0.764
ENSRNOG00000005951 Rattus norvegicus ENSRNOG00000005951 I 0.764
ENSCAFG00000006663 Canis familiaris ENSCAFG00000006663 I 0.762
ENSMMUG00000013424 Macaca mulatta ENSMMUG00000013424 I 0.762
ENSCAFG00000017316 Canis familiaris ENSCAFG00000017316 I 0.762
ENSCAFG00000019104 Canis familiaris ENSCAFG00000019104 I 0.762
XM_543834.2 Canis familiaris ENSCAFG00000002157 I 0.762
ENSCAFG00000024824 Canis familiaris ENSCAFG00000024824 I 0.762
ENSMMUG00000022448 Macaca mulatta ENSMMUG00000022448 I 0.761
ENSMMUG00000008337 Macaca mulatta ENSMMUG00000008337 I 0.759
D4A2D2_RAT Rattus norvegicus ENSRNOG00000021986 I 0.757
ENSOCUG00000022627 Oryctolagus cuniculus ENSOCUG00000022627 I 0.757
ENSCJAG00000004902 Callithrix jacchus ENSCJAG00000004902 I 0.757
XM_855847.1 Canis familiaris ENSCAFG00000006327 I 0.757
ENSRNOG00000021280 Rattus norvegicus ENSRNOG00000021280 I 0.757
ENSCJAG00000032417 Callithrix jacchus ENSCJAG00000032417 I 0.757
ENSCAFG00000024951 Canis familiaris ENSCAFG00000024951 I 0.757
ENSMICG00000009289 Microcebus murinus ENSMICG00000009289 I 0.755
ENSCAFG00000008379 Canis familiaris ENSCAFG00000008379 I 0.752
ENSCAFG00000013303 Canis familiaris ENSCAFG00000013303 I 0.752
ENSMODG00000023422 Monodelphis domestica ENSMODG00000023422 I 0.748
ENSCAFG00000007918 Canis familiaris ENSCAFG00000007918 I 0.748
XM_001106745.1 Macaca mulatta ENSMMUG00000031809 I 0.748
ENSCAFG00000018186 Canis familiaris ENSCAFG00000018186 I 0.748
ENSCJAG00000005326 Callithrix jacchus ENSCJAG00000005326 I 0.745
ENSCAFG00000023056 Canis familiaris ENSCAFG00000023056 I 0.745
hnrnpa1 Xenopus tropicalis ENSXETG00000021277 I 0.743
ENSCJAG00000000095 Callithrix jacchus ENSCJAG00000000095 I 0.743
ENSMMUG00000007695 Macaca mulatta ENSMMUG00000007695 I 0.743
ENSRNOG00000011100 Rattus norvegicus ENSRNOG00000011100 I 0.743
ENSCAFG00000005164 Canis familiaris ENSCAFG00000005164 I 0.743
ENSMMUG00000031948 Macaca mulatta ENSMMUG00000031948 I 0.743
Ame_R018030 Ailuropoda melanoleuca Ame_R018030 I 0.743
XR_011984.1 Macaca mulatta ENSMMUG00000011640 I 0.743
ENSCAFG00000003418 Canis familiaris ENSCAFG00000003418 I 0.741
ENSCJAG00000001302 Callithrix jacchus ENSCJAG00000001302 I 0.741
ENSCAFG00000017494 Canis familiaris ENSCAFG00000017494 I 0.738
ENSPPYG00000003855 Pongo pygmaeus ENSPPYG00000003855 I 0.738
ENSCAFG00000025274 Canis familiaris ENSCAFG00000025274 I 0.736
CBU92546 Xenopus laevis CBU92546 I 0.736
AAH72090 Xenopus laevis AAH72090 I 0.736
ENSLAFG00000029171 Loxodonta africana ENSLAFG00000029171 I 0.736
ENSCJAG00000020672 Callithrix jacchus ENSCJAG00000020672 I 0.736
CBF67672 Xenopus laevis CBF67672 I 0.736
ENSCJAG00000001737 Callithrix jacchus ENSCJAG00000001737 I 0.736
ENSGGOG00000025827 Gorilla gorilla ENSGGOG00000025827 I 0.736
XP_541811.1 Canis familiaris ENSCAFG00000006586 I 0.736
ENSETEG00000015332 Echinops telfairi ENSETEG00000015332 I 0.736
AAH45260 Xenopus laevis AAH45260 I 0.736
Hnrnpa1 Dipodomys ordii ENSDORG00000010628 I 0.734
ENSSARG00000008946 Sorex araneus ENSSARG00000008946 I 0.734
ENSOGAG00000017179 Otolemur garnettii ENSOGAG00000017179 I 0.730
ENSSTOG00000015259 Spermophilus tridecemlineatus ENSSTOG00000015259 I 0.729
ENSEEUG00000009941 Erinaceus europaeus ENSEEUG00000009941 I 0.729
ENSGGOG00000027879 Gorilla gorilla ENSGGOG00000027879 I 0.729
ENSCJAG00000007250 Callithrix jacchus ENSCJAG00000007250 I 0.729
ENSCAFG00000002059 Canis familiaris ENSCAFG00000002059 I 0.729
ENSCAFG00000000746 Canis familiaris ENSCAFG00000000746 I 0.729
ENSCJAG00000005407 Callithrix jacchus ENSCJAG00000005407 I 0.727
ENSCJAG00000007634 Callithrix jacchus ENSCJAG00000007634 I 0.725
ENSCAFG00000006036 Canis familiaris ENSCAFG00000006036 I 0.723
CBF67555 Xenopus laevis CBF67555 I 0.722
CBU92428 Xenopus laevis CBU92428 I 0.722
P17130 Xenopus laevis P17130 I 0.722
AAA49742 Xenopus laevis AAA49742 I 0.722
AAA49741 Xenopus laevis AAA49741 I 0.722
hnrnpa3 Xenopus tropicalis ENSXETG00000001806 I 0.722
HNRNPA3 Anolis carolinensis ENSACAG00000012234 I 0.722
ENSCAFG00000014094 Canis familiaris ENSCAFG00000014094 I 0.722
ENSCJAG00000033784 Callithrix jacchus ENSCJAG00000033784 I 0.722
ENSGACG00000009435 Gasterosteus aculeatus ENSGACG00000009435 I 0.722
ENSCAFG00000008301 Canis familiaris ENSCAFG00000008301 I 0.722
ENSCAFG00000010467 Canis familiaris ENSCAFG00000010467 I 0.721
ENSRNOG00000042093 Rattus norvegicus ENSRNOG00000042093 I 0.720
ENSPCAG00000001867 Procavia capensis ENSPCAG00000001867 I 0.718
LOC100411573 Callithrix jacchus ENSCJAG00000023383 I 0.717
HNRNPA3 Dasypus novemcinctus ENSDNOG00000019022 I 0.717
ENSMMUG00000001858 Macaca mulatta ENSMMUG00000001858 I 0.717
HNRNPA3 Sus scrofa ENSSSCG00000015988 I 0.717
ROA3_RAT Rattus norvegicus ENSRNOG00000027001 I 0.717
HNRNPA3 Tursiops truncatus ENSTTRG00000014225 I 0.717
ENSCAFG00000013497 Canis familiaris ENSCAFG00000013497 I 0.717
HNRNPA3 Homo sapiens ENSG00000170144 I 0.717
HNRNPA3 Gorilla gorilla ENSGGOG00000006130 I 0.717
LOC100360986 Rattus norvegicus ENSRNOG00000001556 I 0.717
HNRNPA3 Macropus eugenii ENSMEUG00000013622 I 0.717
LOC781499 Bos taurus ENSBTAG00000021580 I 0.717
HNRNPA3 Myotis lucifugus ENSMLUG00000003906 I 0.717
HNRNPA3 Monodelphis domestica ENSMODG00000019803 I 0.717
ENSCPOG00000004251 Cavia porcellus ENSCPOG00000004251 I 0.717
HNRNPA3 Pteropus vampyrus ENSPVAG00000010380 I 0.717
Hnrnpa3 Mus musculus ENSMUSG00000059005 I 0.717
HNRNPA3 Cavia porcellus ENSCPOG00000011301 I 0.717
HNRNPA3 Pan troglodytes ENSPTRG00000012676 I 0.717
ENSMMUG00000004528 Macaca mulatta ENSMMUG00000004528 I 0.716
ENSG00000231942 Homo sapiens ENSG00000231942 I 0.716
HNRPA3 Gallus gallus ENSGALG00000009250 I 0.715
HNRNPA3 Meleagris gallopavo ENSMGAG00000009565 I 0.715
Gm8991 Mus musculus ENSMUSG00000059179 I 0.715
AAA49949 Xenopus laevis AAA49949 I 0.715
ENSEEUG00000011837 Erinaceus europaeus ENSEEUG00000011837 I 0.715
P51968 Xenopus laevis P51968 I 0.715
HNRNPA3 Felis catus ENSFCAG00000012146 I 0.715
LOC100066794 Equus caballus ENSECAG00000023237 I 0.715
ENSORLG00000008001 Oryzias latipes ENSORLG00000008001 I 0.715
HNRNPA3 Taeniopygia guttata ENSTGUG00000008996 I 0.715
D3ZTB7_RAT Rattus norvegicus ENSRNOG00000031608 I 0.715
ENSCAFG00000005207 Canis familiaris ENSCAFG00000005207 I 0.715
ENSRNOG00000023438 Rattus norvegicus ENSRNOG00000023438 I 0.715
XP_848548.1 Canis familiaris ENSCAFG00000016313 I 0.715
ENSCJAG00000017130 Callithrix jacchus ENSCJAG00000017130 I 0.715
ENSCAFG00000018456 Canis familiaris ENSCAFG00000018456 I 0.713
ENSCAFG00000024812 Canis familiaris ENSCAFG00000024812 I 0.713
ENSETEG00000001872 Echinops telfairi ENSETEG00000001872 I 0.712
ENSMMUG00000004182 Macaca mulatta ENSMMUG00000004182 I 0.712
ENSMICG00000012083 Microcebus murinus ENSMICG00000012083 I 0.711
HNRNPA3 Oryctolagus cuniculus ENSOCUG00000002743 I 0.710
ENSCJAG00000007639 Callithrix jacchus ENSCJAG00000007639 I 0.710
ENSGGOG00000024290 Gorilla gorilla ENSGGOG00000024290 I 0.709
HNRNPA2B1 Taeniopygia guttata ENSTGUG00000002869 I 0.709
ENSETEG00000018059 Echinops telfairi ENSETEG00000018059 I 0.709
ENSCAFG00000007198 Canis familiaris ENSCAFG00000007198 I 0.709
ENSGGOG00000025265 Gorilla gorilla ENSGGOG00000025265 I 0.708
D3ZXA3_RAT Rattus norvegicus ENSRNOG00000038905 I 0.708
D4ABW2_RAT Rattus norvegicus ENSRNOG00000032168 I 0.706
ENSCAFG00000013932 Canis familiaris ENSCAFG00000013932 I 0.706
ENSCAFG00000016707 Canis familiaris ENSCAFG00000016707 I 0.706
CBF67578 Xenopus laevis CBF67578 I 0.705
AAI69881 Xenopus laevis AAI69881 I 0.705
AAA49950 Xenopus laevis AAA49950 I 0.705
P51992 Xenopus laevis P51992 I 0.705
CBU92451 Xenopus laevis CBU92451 I 0.705
ENSGGOG00000022797 Gorilla gorilla ENSGGOG00000022797 I 0.704
ENSCAFG00000009606 Canis familiaris ENSCAFG00000009606 I 0.704
ENSCAFG00000019097 Canis familiaris ENSCAFG00000019097 I 0.703
LOC100401647 Callithrix jacchus ENSCJAG00000007908 I 0.702
ROA2_BOVIN Bos taurus ENSBTAG00000005726 I 0.702
P51989 Xenopus laevis P51989 I 0.702
HNRNPA2B1 Canis familiaris ENSCAFG00000002885 I 0.702
ENSCAFG00000003921 Canis familiaris ENSCAFG00000003921 I 0.702
HNRNPA2B1 Pan troglodytes ENSPTRG00000019002 I 0.702
Q5ZME1_CHICK Gallus gallus ENSGALG00000011036 I 0.702
HNRNPA2B1 Macaca mulatta ENSMMUG00000003619 I 0.702
HNRNPA2B1 Dasypus novemcinctus ENSDNOG00000012928 I 0.702
HNRNPA2B1 Monodelphis domestica ENSMODG00000000603 I 0.702
CBU92450 Xenopus laevis CBU92450 I 0.702
Hnrnpa2b1 Mus musculus ENSMUSG00000004980 I 0.702
HNRNPA2B1 Myotis lucifugus ENSMLUG00000007578 I 0.702
Hnrnpa2b1 Dipodomys ordii ENSDORG00000005482 I 0.702
HNRNPA2B1 Loxodonta africana ENSLAFG00000006902 I 0.702
HNRNPA2B1 Gorilla gorilla ENSGGOG00000017072 I 0.702
LOC100068539 Equus caballus ENSECAG00000000782 I 0.702
ENSMEUG00000001084 Macropus eugenii ENSMEUG00000001084 I 0.702
HNRNPA2B1 Meleagris gallopavo ENSMGAG00000010635 I 0.702
ENSMEUG00000014479 Macropus eugenii ENSMEUG00000014479 I 0.702
HNRNPA2B1 Ornithorhynchus anatinus ENSOANG00000009159 I 0.702
HNRNPA2B1 Homo sapiens ENSG00000122566 D 0.702
hnrnpa2b1 Xenopus tropicalis ENSXETG00000012170 I 0.702
HNRNPA2B1 Tursiops truncatus ENSTTRG00000000709 I 0.702
Ame_R000626 Ailuropoda melanoleuca Ame_R000626 I 0.702
AAA49948 Xenopus laevis AAA49948 I 0.702
CBF67577 Xenopus laevis CBF67577 I 0.702
AAH46692 Xenopus laevis AAH46692 I 0.702
HNRNPA2B1 Echinops telfairi ENSETEG00000018577 I 0.702
ENSSTOG00000006202 Spermophilus tridecemlineatus ENSSTOG00000006202 I 0.702
ENSCJAG00000021872 Callithrix jacchus ENSCJAG00000021872 I 0.702
HNRNPA2B1 Oryctolagus cuniculus ENSOCUG00000026859 I 0.702
ENSPPYG00000017715 Pongo pygmaeus ENSPPYG00000017715 I 0.702
HNRNPA2B1 Pteropus vampyrus ENSPVAG00000006296 I 0.702
ENSCJAG00000015222 Callithrix jacchus ENSCJAG00000015222 I 0.702
Hnrnpa2b1 Rattus norvegicus ENSRNOG00000011175 I 0.702
HNRNPA2B1 Choloepus hoffmanni ENSCHOG00000013832 I 0.702
hnrnpa1 Danio rerio ENSDARG00000036675 I 0.701
Q1KKU4_FUGRU Takifugu rubripes ENSTRUG00000002190 I 0.701
ENSCJAG00000032970 Callithrix jacchus ENSCJAG00000032970 I 0.701
ENSMMUG00000018397 Macaca mulatta ENSMMUG00000018397 I 0.701