ENSACAG00000005544 (Anolis carolinensis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSACAG00000005544 T34639_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
B52
M334_0.6 		Drosophila melanogaster GRUCAACCNGGCGACMG SELEX
Cook et al.(2011)
802_9111335 		0.752
B52
M126_0.6 		Drosophila melanogaster GGASGRV RNAcompete
Ray et al.(2013)
RNCMPT00134 		0.752
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSACAP00000005406 RRM 6 68
ENSACAP00000005406 RRM 109 174

Links

Other RRM family RBPs
Other Anolis carolinensis RBPs

133 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
RBM39 Anolis carolinensis ENSACAG00000006436 N 0.000
rbm39a Danio rerio ENSDARG00000011613 N 0.000
RBM39 Gallus gallus ENSGALG00000001550 N 0.000
RBM23 Oryzias latipes ENSORLG00000009919 N 0.000
RBM23 Oryzias latipes ENSORLG00000010370 N 0.000
RBM39 Taeniopygia guttata ENSTGUG00000003048 N 0.000
RBM23 Tetraodon nigroviridis ENSTNIG00000017904 N 0.000
RBM23 Takifugu rubripes ENSTRUG00000011352 N 0.000
estExt_Genewise1.C_sca_90322 Lottia gigantea estExt_Genewise1.C_sca_90322 N 0.000