ADR062W (Ashbya gossypii)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ADR062W T05936_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Q75A57 CCCH ZF 70 95
Q75A57 CCCH ZF 101 124

Links

Other CCCH ZF family RBPs
Other Ashbya gossypii RBPs

66 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ZYRO0F08690g Zygosaccharomyces rouxii ZYRO0F08690g N 0.784
22086_YPL054W Saccharomyces mikatae 22086_YPL054W N 0.740
Scas_Contig567.6 Saccharomyces castellii Scas_Contig567.6 N 0.800
EAT89389.2 Phaeosphaeria nodorum EAT89389.2 N 0.725
gw1.28.197.1 Nectria haematococca gw1.28.197.1 N 0.725
estExt_Genewise1Plus.C_chr_60126 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_60126 N 0.700
estExt_Genewise1Plus.C_130028 Neurospora discreta estExt_Genewise1Plus.C_130028 N 0.765
estExt_Genewise1.C_81229 Thielavia terrestris estExt_Genewise1.C_81229 N 0.725
estExt_Genewise1.C_60695 Trichoderma atroviride estExt_Genewise1.C_60695 N 0.725
estExt_Genewise1.C_110035 Neurospora tetrasperma estExt_Genewise1.C_110035 N 0.765
estExt_fgenesh5_pg.C_100355 Trichoderma reesei estExt_fgenesh5_pg.C_100355 N 0.745
estExt_fgenesh1_pg.C_160206 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_160206 N 0.725
estExt_fgenesh1_kg.C_60003 Myceliophthora thermophila estExt_fgenesh1_kg.C_60003 N 0.725
e_gwh1.2.1.2495.1 Pichia stipitis e_gwh1.2.1.2495.1 N 0.740
e_gw1.29.29.1 Trichoderma virens e_gw1.29.29.1 N 0.745
23616_YPL054W Saccharomyces paradoxus 23616_YPL054W N 0.745
25080_YPL054W Saccharomyces bayanus 25080_YPL054W N 0.760
A7TTU4_VANPO Vanderwaltozyma polyspora A7TTU4_VANPO N 0.700
YALI0B12540g Yarrowia lipolytica YALI0B12540g N 0.820
XP_002493509.1 Pichia pastoris XP_002493509.1 N 0.760
SAKL0H10846g Lachancea kluyveri SAKL0H10846g N 0.920
PMAA_005110 Penicillium marneffei PMAA_005110 N 0.765
Pc20g08250 Penicillium chrysogenum Pc20g08250 N 0.765
Pa_5_7490 Podospora anserina Pa_5_7490 N 0.725
KLTH0E11836g Kluyveromyces thermotolerans KLTH0E11836g N 0.880
KLLA0B09878g Kluyveromyces lactis KLLA0B09878g N 0.780
GSTUMT00003772001 Tuber melanosporum GSTUMT00003772001 N 0.765
fgenesh1_pm.00118_#_26 Aspergillus carbonarius fgenesh1_pm.00118_#_26 N 0.765
EuGene12000543 Heterobasidion annosum EuGene12000543 N 0.700
e_gw1.10.437.1 Cryphonectria parasitica e_gw1.10.437.1 N 0.725
Cd36_85970 Candida dubliniensis Cd36_85970 N 0.740
AB08315.1 Alternaria brassicicola AB08315.1 N 0.725
LEE1 Saccharomyces cerevisiae YPL054W N 0.745
NCU05007 Neurospora crassa NCU05007 N 0.765
orf19.7385 Candida albicans orf19.7385 N 0.740
MGYG_05636 Microsporum gypseum MGYG_05636 N 0.745
MGG_03480 Magnaporthe oryzae MGG_03480 N 0.706
MCYG_08235 Microsporum canis MCYG_08235 N 0.745
HCAG_10294 Histoplasma capsulatum HCAG_10294 N 0.765
GLRG_01727 Colletotrichum graminicola GLRG_01727 N 0.725
FVEG_07196 Fusarium verticillioides FVEG_07196 N 0.740
FOXG_04082 Fusarium oxysporum FOXG_04082 N 0.740
DEHA0D17303g Debaryomyces hansenii DEHA0D17303g N 0.740
CTRG_02259 Candida tropicalis CTRG_02259 N 0.720
CPSG_06815 Coccidioides posadasii CPSG_06815 N 0.765
CPAG_02338 Candida parapsilosis CPAG_02338 N 0.700
CLUG_02022 Candida lusitaniae CLUG_02022 N 0.720
CIMG_10872 Coccidioides immitis CIMG_10872 N 0.765
PABG_05614 Paracoccidioides brasiliensis PABG_05614 N 0.765
PTRG_01963 Pyrenophora tritici repentis PTRG_01963 N 0.725
SJAG_03191 Schizosaccharomyces japonicus SJAG_03191 N 0.706
NFIA_071620 Neosartorya fischeri CADNFIAG00006536 N 0.765
ATEG_08978 Aspergillus terreus CADATEAG00006440 N 0.765
AO090020000028 Aspergillus oryzae CADAORAG00006562 N 0.765
ANIA_03447 Aspergillus nidulans CADANIAG00009587 N 0.745
An11g11070 Aspergillus niger CADANGAG00009424 N 0.765
AFUA_3G05570 Aspergillus fumigatus CADAFUAG00005783 N 0.765
AFLA_103810 Aspergillus flavus CADAFLAG00012116 N 0.765
ACLA_033580 Aspergillus clavatus CADACLAG00003610 N 0.731
VDBG_09822 Verticillium albo atrum VDBG_09822 N 0.780
VDAG_09556 Verticillium dahliae VDAG_09556 N 0.780
UREG_06970 Uncinocarpus reesii UREG_06970 N 0.765
TERG_02518 Trichophyton rubrum TERG_02518 N 0.745
TEQG_01582 Trichophyton equinum TEQG_01582 N 0.745
SNOG_02658 Stagonospora nodorum SNOG_02658 N 0.725
CHGG_00049 Chaetomium globosum CHGG_00049 N 0.745