BRADI2G56676 (Brachypodium distachyon)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 BRADI2G56676 T33204_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
AT1G76460-TAIR-G
M239_0.6 		Arabidopsis thaliana DGWGUGD RNAcompete
Ray et al.(2013)
RNCMPT00284 		0.721
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
BRADI2G56676.1 RRM 18 76
BRADI2G56676.2 RRM 18 76

Links

Other RRM family RBPs
Other Brachypodium distachyon RBPs

77 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ppa019392m Prunus persica ppa019392m I 0.000
CU179634_3 Medicago truncatula CU179634_3 I 0.716
mgf017214m Mimulus guttatus mgf017214m I 0.750
gw1.51.103.1 Physcomitrella patens gw1.51.103.1 I 0.706
gw1.41.247.1 Selaginella moellendorfii gw1.41.247.1 I 0.706
gw1.126.80.1 Physcomitrella patens gw1.126.80.1 I 0.000
Glyma16g02220.1 Glycine max Glyma16g02220.1 I 0.721
Glyma16g02120.1 Glycine max Glyma16g02120.1 I 0.000
Glyma14g35110.1 Glycine max Glyma14g35110.1 I 0.000
Glyma13g01740.1 Glycine max Glyma13g01740.1 I 0.706
Glyma07g05670.1 Glycine max Glyma07g05670.1 I 0.721
Glyma07g05590.1 Glycine max Glyma07g05590.1 I 0.000
Glyma06g10750.1 Glycine max Glyma06g10750.1 I 0.000
Glyma06g01670.1 Glycine max Glyma06g01670.1 I 0.776
Medtr3g159840 Medicago truncatula Medtr3g159840 I 0.776
Medtr5g073010 Medicago truncatula Medtr5g073010 I 0.000
ppa018926m Prunus persica ppa018926m I 0.000
ppa016222m Prunus persica ppa016222m I 0.735
ppa009964m Prunus persica ppa009964m I 0.706
ppa009716m Prunus persica ppa009716m I 0.721
MDP0000744398 Malus x domestica MDP0000744398 I 0.750
MDP0000548950 Malus x domestica MDP0000548950 I 0.750
MDP0000488395 Malus x domestica MDP0000488395 I 0.735
MDP0000284454 Malus x domestica MDP0000284454 I 0.000
MDP0000233609 Malus x domestica MDP0000233609 I 0.000
MDP0000184420 Malus x domestica MDP0000184420 I 0.000
MDP0000138486 Malus x domestica MDP0000138486 I 0.701
MDP0000134468 Malus x domestica MDP0000134468 I 0.000
LjSGA_018073.2 Lotus japonicus LjSGA_018073.2 I 0.735
Glyma04g40770.1 Glycine max Glyma04g40770.1 I 0.000
Glyma04g10900.1 Glycine max Glyma04g10900.1 I 0.000
B9H5W4_POPTR Populus trichocarpa POPTR_0005s27810 I 0.765
B9GRQ8_POPTR Populus trichocarpa POPTR_0002s17990 I 0.750
B9GUX4_POPTR Populus trichocarpa POPTR_0002s09830 I 0.000
B9GPN6_POPTR Populus trichocarpa POPTR_0002s00610 I 0.750
LOC_Os06g11730 Oryza sativa LOC_Os06g11730 I 0.000
GSVIVG00027434001 Vitis vinifera GSVIVG00027434001 I 0.735
GSVIVG00009045001 Vitis vinifera GSVIVG00009045001 I 0.000
XM_002889039.1 Arabidopsis lyrata fgenesh2_kg.2__1933__AT1G76460.1 I 0.735
XM_002880217.1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_4002831 I 0.000
AT2G46780 Arabidopsis thaliana AT2G46780-TAIR-G I 0.000
PK21213.1 Cannabis sativa PK21213.1 I 0.761
A9PAJ1_POPTR Populus trichocarpa POPTR_0014s10090 I 0.721
29908.m006046 Ricinus communis 29908.m006046 I 0.000
30076.m004440 Ricinus communis 30076.m004440 I 0.721
Glyma04g01590.1 Glycine max Glyma04g01590.1 I 0.776
Cucsa.348630 Cucumis sativus Cucsa.348630 I 0.735
Cucsa.311530 Cucumis sativus Cucsa.311530 I 0.000
Cucsa.005270 Cucumis sativus Cucsa.005270 I 0.765
cassava7423.valid.m1 Manihot esculenta cassava7423.valid.m1 I 0.750
cassava44391.m1 Manihot esculenta cassava44391.m1 I 0.706
cassava39454.m1 Manihot esculenta cassava39454.m1 I 0.000
cassava39418.m1 Manihot esculenta cassava39418.m1 I 0.721
cassava32990.m1 Manihot esculenta cassava32990.m1 I 0.735
cassava23406.valid.m1 Manihot esculenta cassava23406.valid.m1 I 0.000
cassava23405.valid.m1 Manihot esculenta cassava23405.valid.m1 I 0.000
PK15672.1 Cannabis sativa PK15672.1 I 0.000
XM_002890463.1 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1001899 N 0.000
AT1G78260 Arabidopsis thaliana AT1G78260-TAIR-G N 0.000
AT1G22330 Arabidopsis thaliana AT1G22330-TAIR-G N 0.000