ENSACAG00000005544 (Anolis carolinensis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSACAG00000005544 T34639_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
B52
M334_0.6 		Drosophila melanogaster GRUCAACCNGGCGACMG SELEX
Cook et al.(2011)
802_9111335 		0.752
B52
M126_0.6 		Drosophila melanogaster GGASGRV RNAcompete
Ray et al.(2013)
RNCMPT00134 		0.752
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSACAP00000005406 RRM 6 68
ENSACAP00000005406 RRM 109 174

Links

Other RRM family RBPs
Other Anolis carolinensis RBPs

133 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ARB_03559 Arthroderma benhamiae ARB_03559 N 0.000
e_gw1.18.954.1 Nectria haematococca e_gw1.18.954.1 N 0.000
e_gw1.3.693.1 Trichoderma reesei e_gw1.3.693.1 N 0.000
estExt_fgenesh1_pg.C_chr_40551 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_40551 N 0.000
estExt_Genewise1.C_30334 Cochliobolus heterostrophus C5 estExt_Genewise1.C_30334 N 0.000
fgenesh1_pg.C_scaffold_13000098 Trichoderma virens fgenesh1_pg.C_scaffold_13000098 N 0.000
fgenesh1_pg.C_scaffold_8000400 Trichoderma atroviride fgenesh1_pg.C_scaffold_8000400 N 0.000
AB01983.1 Alternaria brassicicola AB01983.1 N 0.000
fgenesh1_pm.00795_#_61 Aspergillus carbonarius fgenesh1_pm.00795_#_61 N 0.000
Pc13g06240 Penicillium chrysogenum Pc13g06240 N 0.000
ATEG_02228 Aspergillus terreus CADATEAG00000017 N 0.000
An14g00750 Aspergillus niger CADANGAG00011011 N 0.000
CIMG_08661 Coccidioides immitis CIMG_08661 N 0.000
CPSG_05597 Coccidioides posadasii CPSG_05597 N 0.000
FOXG_08443 Fusarium oxysporum FOXG_08443 N 0.000
MCYG_02556 Microsporum canis MCYG_02556 N 0.000
TERG_05645 Trichophyton rubrum TERG_05645 N 0.000
TESG_07117 Trichophyton tonsurans TESG_07117 N 0.000
TRV_06609 Trichophyton verrucosum TRV_06609 N 0.000
UREG_02651 Uncinocarpus reesii UREG_02651 N 0.000
ACLA_054290 Aspergillus clavatus CADACLAG00005245 N 0.000
PMAA_085380 Penicillium marneffei PMAA_085380 N 0.000