Q91017_CHICK (Gallus gallus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSGALG00000002514 T37616_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
SFPQ
M308_0.6 		Homo sapiens Sequence logo not available UGGAGAGGAAC SELEX
Cook et al.(2011)
489_12403470 		0.955
SFPQ
M168_0.6 		Homo sapiens KURRUKK RNAcompete
Ray et al.(2013)
RNCMPT00177 		0.955
NONO
M309_0.6 		Homo sapiens Sequence logo not available GAGAGGAAC SELEX
Cook et al.(2011)
490_12403470 		0.758
NONO
M307_0.6 		Homo sapiens AGGGA SELEX
Cook et al.(2011)
488_9001221 		0.758
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSGALP00000003954 RRM 239 303
ENSGALP00000003954 RRM 313 379
ENSGALP00000040026 RRM 26 93

Links

Other RRM family RBPs
Other Gallus gallus RBPs

114 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
rbck1 Danio rerio ENSDARG00000031954 N 0.000
RBCK1 Dasypus novemcinctus ENSDNOG00000017407 N 0.000
RBCK1 Oryzias latipes ENSORLG00000006036 N 0.000
SHARPIN Anolis carolinensis ENSACAG00000007245 N 0.000