e_gw1.89.27.1 (Lottia gigantea)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 e_gw1.89.27.1 T50143_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
B52
M334_0.6 		Drosophila melanogaster GRUCAACCNGGCGACMG SELEX
Cook et al.(2011)
802_9111335 		0.760
B52
M126_0.6 		Drosophila melanogaster GGASGRV RNAcompete
Ray et al.(2013)
RNCMPT00134 		0.760
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.89.27.1 RRM 5 67
e_gw1.89.27.1 RRM 117 182

Links

Other RRM family RBPs
Other Lottia gigantea RBPs

131 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Dp1 Drosophila melanogaster FBgn0027835 N 0.000
GA18708-RA Drosophila pseudoobscura FBgn0078708 N 0.000
GD11380 Drosophila simulans FBgn0183129 N 0.000
GE11968 Drosophila yakuba FBgn0229746 N 0.000
GF12176 Drosophila ananassae FBgn0089215 N 0.000
GG21892 Drosophila erecta FBgn0114070 N 0.000
GH21672 Drosophila grimshawi FBgn0129133 N 0.000
GI20125 Drosophila mojavensis FBgn0142861 N 0.000
GJ19895 Drosophila virilis FBgn0207037 N 0.000
GK22993 Drosophila willistoni FBgn0224955 N 0.000
GM21884 Drosophila sechellia FBgn0176761 N 0.000