A6MKZ3_CALJA (Callithrix jacchus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSCJAG00000022539 T18556_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Pcbp1
M207_0.6 		Mus musculus CYUUCC RNAcompete
Ray et al.(2013)
RNCMPT00239 		0.979
PCBP1
M177_0.6 		Homo sapiens CCWWHCC RNAcompete
Ray et al.(2013)
RNCMPT00186 		0.979
PCBP2
M043_0.6 		Homo sapiens CCYYCCH RNAcompete
Ray et al.(2013)
RNCMPT00044 		0.920
pcbp2
M211_0.6 		Danio rerio WWUCCC RNAcompete
Ray et al.(2013)
RNCMPT00246 		0.894
Pcbp3
M188_0.6 		Mus musculus UUUYCC RNAcompete
Ray et al.(2013)
RNCMPT00215 		0.856
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000041146 KH 15 75
ENSCJAP00000041146 KH 99 162
ENSCJAP00000041146 KH 281 343

Links

Other KH family RBPs
Other Callithrix jacchus RBPs

111 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
DGIL_AUG5s5532g9t1 Acyrtosiphon pisum DGIL_AUG5s5532g9t1 I 0.000
Ame_R002707 Ailuropoda melanoleuca Ame_R002707 I 0.979
Ame_R011627 Ailuropoda melanoleuca Ame_R011627 I 0.819
Ame_R007160 Ailuropoda melanoleuca Ame_R007160 I 0.766
PCBP4 Anolis carolinensis ENSACAG00000011701 I 0.000
ENSACAG00000009819 Anolis carolinensis ENSACAG00000009819 I 0.835
ENSACAG00000000783 Anolis carolinensis ENSACAG00000000783 I 0.920
amel4_ncbi_hmm16330 Apis mellifera amel4_ncbi_hmm16330 I 0.000
PCBP4_BOVIN Bos taurus ENSBTAG00000018622 I 0.000
Q3SYT9_BOVIN Bos taurus ENSBTAG00000020757 I 0.920
Q17QV0_BOVIN Bos taurus ENSBTAG00000030775 I 0.846
PCBP1_BOVIN Bos taurus ENSBTAG00000008985 I 0.979
fgenesh2_pg.scaffold_166000022 Branchiostoma floridae fgenesh2_pg.scaffold_166000022 I 0.709
estExt_gwp.C_3950051 Branchiostoma floridae estExt_gwp.C_3950051 I 0.709
LOC100408015 Callithrix jacchus ENSCJAG00000001903 I 0.856
ENSCJAG00000034075 Callithrix jacchus ENSCJAG00000034075 I 0.915
LOC100392590 Callithrix jacchus ENSCJAG00000018590 I 0.910
LOC100409398 Callithrix jacchus ENSCJAG00000007694 I 0.862
A6MK33_CALJA Callithrix jacchus ENSCJAG00000005783 I 0.000
PCBP1 Callithrix jacchus ENSCJAG00000004017 I 0.957
PCBP4 Canis familiaris ENSCAFG00000010019 I 0.000
PCBP2 Canis familiaris ENSCAFG00000006821 I 0.920
PCBP1 Canis familiaris ENSCAFG00000013845 I 0.941
fgenesh1_pm.C_scaffold_76000004 Capitella teleta fgenesh1_pm.C_scaffold_76000004 I 0.000
ENSCPOG00000000967 Cavia porcellus ENSCPOG00000000967 I 0.920
PCBP3 Cavia porcellus ENSCPOG00000003648 I 0.856
PCBP1 Cavia porcellus ENSCPOG00000013511 I 0.979
PCBP4 Cavia porcellus ENSCPOG00000014617 I 0.000
pcbp3 Danio rerio ENSDARG00000054378 I 0.761
pcbp2 Danio rerio ENSDARG00000013184 D 0.894
PASA_GEN_0700132 Daphnia pulex PASA_GEN_0700132 I 0.000
PCBP2 Dasypus novemcinctus ENSDNOG00000008688 I 0.920
PCBP2 Echinops telfairi ENSETEG00000014741 I 0.819
PCBP3 Echinops telfairi ENSETEG00000015988 I 0.000
PCBP2 Equus caballus ENSECAG00000022389 I 0.920
LOC100050101 Equus caballus ENSECAG00000012413 I 0.856
LOC100060660 Equus caballus ENSECAG00000024218 I 0.000
LOC100050579 Equus caballus ENSECAG00000002544 I 0.979
PCBP3 Felis catus ENSFCAG00000014812 I 0.723
PCBP3 Gallus gallus ENSGALG00000013155 I 0.840
PCBP3 Gallus gallus ENSGALG00000004394 I 0.830
PCBP3 Gasterosteus aculeatus ENSGACG00000014955 I 0.846
PCBP3 Gasterosteus aculeatus ENSGACG00000002266 I 0.846
PCBP4 Gasterosteus aculeatus ENSGACG00000002664 I 0.735
ENSGACG00000006681 Gasterosteus aculeatus ENSGACG00000006681 I 0.872
ENSGACG00000003044 Gasterosteus aculeatus ENSGACG00000003044 I 0.726
ENSGACG00000003197 Gasterosteus aculeatus ENSGACG00000003197 I 0.872
PCBP3 Gorilla gorilla ENSGGOG00000003683 I 0.856
PCBP4 Gorilla gorilla ENSGGOG00000012474 I 0.000
PCBP2 Gorilla gorilla ENSGGOG00000012613 I 0.920
PCBP1 Gorilla gorilla ENSGGOG00000028130 I 0.979
PCBP2 Homo sapiens ENSG00000197111 D 0.920
PCBP3 Homo sapiens ENSG00000183570 I 0.856
PCBP1 Homo sapiens ENSG00000169564 D 0.979
PCBP4 Homo sapiens ENSG00000090097 I 0.000
ISCW016289 Ixodes scapularis ISCW016289 I 0.000
ENSLAFG00000013187 Loxodonta africana ENSLAFG00000013187 I 0.920
ENSLAFG00000025534 Loxodonta africana ENSLAFG00000025534 I 0.741
PCBP3 Loxodonta africana ENSLAFG00000020835 I 0.777
PCBP2 Macaca mulatta ENSMMUG00000006608 I 0.920
PCBP3 Macaca mulatta ENSMMUG00000003825 I 0.856
PCBP4 Macaca mulatta ENSMMUG00000022205 I 0.000
PCBP3 Macropus eugenii ENSMEUG00000012960 I 0.814
PCBP2 Macropus eugenii ENSMEUG00000001887 I 0.840
ENSMGAG00000006794 Meleagris gallopavo ENSMGAG00000006794 I 0.793
PCBP3 Meleagris gallopavo ENSMGAG00000001883 I 0.856
PCBP3 Microcebus murinus ENSMICG00000012679 I 0.761
PCBP2 Microcebus murinus ENSMICG00000011651 I 0.920
ENSMODG00000000280 Monodelphis domestica ENSMODG00000000280 I 0.920
ENSMODG00000020653 Monodelphis domestica ENSMODG00000020653 I 0.725
ENSMODG00000017748 Monodelphis domestica ENSMODG00000017748 I 0.851
PCBP4 Monodelphis domestica ENSMODG00000011790 I 0.000
Pcbp3 Mus musculus ENSMUSG00000001120 D 0.856
Pcbp4 Mus musculus ENSMUSG00000023495 I 0.000
Pcbp2 Mus musculus ENSMUSG00000056851 I 0.920
Pcbp1 Mus musculus ENSMUSG00000051695 D 0.979
PCBP3 Myotis lucifugus ENSMLUG00000003074 I 0.723
PCBP2 Myotis lucifugus ENSMLUG00000009971 I 0.787
PCBP1 Myotis lucifugus ENSMLUG00000014173 I 0.979
nasonia_NCBI_hmm938274 Nasonia vitripennis nasonia_NCBI_hmm938274 I 0.000
PCBP2 Ochotona princeps ENSOPRG00000004680 I 0.920
PCBP3 Ochotona princeps ENSOPRG00000003431 I 0.806
PCBP4 Ornithorhynchus anatinus ENSOANG00000014110 I 0.700
PCBP3 Oryctolagus cuniculus ENSOCUG00000002696 I 0.856
PCBP1_RABIT Oryctolagus cuniculus ENSOCUG00000003634 I 0.979
ENSOCUG00000022490 Oryctolagus cuniculus ENSOCUG00000022490 I 0.920
PCBP4 Oryctolagus cuniculus ENSOCUG00000025336 I 0.000
PCBP3 Oryzias latipes ENSORLG00000000059 I 0.810
ENSORLG00000014385 Oryzias latipes ENSORLG00000014385 I 0.771
ENSORLG00000012872 Oryzias latipes ENSORLG00000012872 I 0.878
ENSORLG00000005176 Oryzias latipes ENSORLG00000005176 I 0.883
PCBP4 Oryzias latipes ENSORLG00000003061 I 0.000
PCBP3 Otolemur garnettii ENSOGAG00000008044 I 0.761
PCBP2 Pan troglodytes ENSPTRG00000005018 I 0.920
PCBP1 Pan troglodytes ENSPTRG00000012025 I 0.979
PCBP3 Pan troglodytes ENSPTRG00000014010 I 0.856
PCBP4 Pan troglodytes ENSPTRG00000014983 I 0.000
ENSPPYG00000013822 Pongo pygmaeus ENSPPYG00000013822 I 0.000
ENSPPYG00000012328 Pongo pygmaeus ENSPPYG00000012328 I 0.979
ENSPPYG00000004581 Pongo pygmaeus ENSPPYG00000004581 I 0.920
PCBP3 Procavia capensis ENSPCAG00000001454 I 0.000
PCBP2 Procavia capensis ENSPCAG00000005154 I 0.920
PCBP2 Pteropus vampyrus ENSPVAG00000012284 I 0.920
PCBP3 Pteropus vampyrus ENSPVAG00000000832 I 0.702
Pcbp1 Rattus norvegicus ENSRNOG00000017708 I 0.979
ENSRNOG00000019487 Rattus norvegicus ENSRNOG00000019487 I 0.799
D4ADH2_RAT Rattus norvegicus ENSRNOG00000039295 I 0.804
Pcbp4 Rattus norvegicus ENSRNOG00000012406 I 0.000
D4A8D6_RAT Rattus norvegicus ENSRNOG00000006713 I 0.740
Pcbp3 Rattus norvegicus ENSRNOG00000001245 I 0.856
PCBP2 Sus scrofa ENSSSCG00000000274 I 0.920
PCBP4 Taeniopygia guttata ENSTGUG00000006393 I 0.000
PCBP3-2 Taeniopygia guttata ENSTGUG00000008158 I 0.840
PCBP1 Taeniopygia guttata ENSTGUG00000016232 I 0.750
PCBP4 Takifugu rubripes ENSTRUG00000007426 I 0.741
ENSTRUG00000017789 Takifugu rubripes ENSTRUG00000017789 I 0.716
PCBP3 Takifugu rubripes ENSTRUG00000013604 I 0.846
PCBP3 Takifugu rubripes ENSTRUG00000006280 I 0.846
ENSTRUG00000011419 Takifugu rubripes ENSTRUG00000011419 I 0.862
ENSTRUG00000009361 Takifugu rubripes ENSTRUG00000009361 I 0.883
PCBP2 Tarsius syrichta ENSTSYG00000009771 I 0.872
PCBP4 Tetraodon nigroviridis ENSTNIG00000017887 I 0.735
PCBP3 Tetraodon nigroviridis ENSTNIG00000010615 I 0.846
PCBP3 Tetraodon nigroviridis ENSTNIG00000008872 I 0.700
PCBP1 Tetraodon nigroviridis ENSTNIG00000012585 I 0.878
PCBP2 Tupaia belangeri ENSTBEG00000015592 I 0.745
PCBP2 Tursiops truncatus ENSTTRG00000017174 I 0.920
PCBP3 Tursiops truncatus ENSTTRG00000015075 I 0.856
AAH41241 Xenopus laevis AAH41241 I 0.910
AAH84195 Xenopus laevis AAH84195 I 0.910
CAB50743 Xenopus laevis CAB50743 I 0.910
CAD29864 Xenopus laevis CAD29864 I 0.910
pcbp3 Xenopus tropicalis ENSXETG00000012658 I 0.910