CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Sharpin
(
Mus musculus
)
RanBP ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
IPR001876
ENSMUSG00000022552
T26620_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMUSP00000023211
RanBP ZF
344
369
GWSCPSCTFINASNRPGCEMCSTQRP
ENSMUSP00000124755
RanBP ZF
47
72
GWSCPSCTFINASNRPGCEMCSTQRP
Links
Other
RanBP ZF
family RBPs
Other
Mus musculus
RBPs
19 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Ame_R013963
Ailuropoda melanoleuca
Ame_R013963
N
0.000
SHARPIN
Anolis carolinensis
ENSACAG00000007245
N
0.741
SHARPIN
Bos taurus
ENSBTAG00000012235
N
0.885
A6ML91_CALJA
Callithrix jacchus
ENSCJAG00000020846
N
0.000
LOC100392136
Callithrix jacchus
ENSCJAG00000021452
N
0.885
RBCK1
Canis familiaris
ENSCAFG00000006921
N
0.704
SHARPIN
Cavia porcellus
ENSCPOG00000013242
N
0.923
RBCK1
Cavia porcellus
ENSCPOG00000005720
N
0.000
CU693494.1
Danio rerio
ENSDARG00000076995
N
0.808
rbck1
Danio rerio
ENSDARG00000031954
N
0.000
RBCK1
Dasypus novemcinctus
ENSDNOG00000017407
N
0.000
LOC100065232
Equus caballus
ENSECAG00000001400
N
0.923
RBCK1
Erinaceus europaeus
ENSEEUG00000013802
N
0.000
RBCK1
Felis catus
ENSFCAG00000003278
N
0.000
SHARPIN
Gallus gallus
ENSGALG00000022341
N
0.750
ENSGACG00000002544
Gasterosteus aculeatus
ENSGACG00000002544
N
0.741
ENSGACG00000017834
Gasterosteus aculeatus
ENSGACG00000017834
N
0.000
RBCK1
Gorilla gorilla
ENSGGOG00000008982
N
0.000
RBCK1
Homo sapiens
ENSG00000125826
N
0.000
RBCK1
Loxodonta africana
ENSLAFG00000027558
N
0.000
RBCK1
Macaca mulatta
ENSMMUG00000012601
N
0.000
ENSMGAG00000007903
Meleagris gallopavo
ENSMGAG00000007903
N
0.808
RBCK1
Microcebus murinus
ENSMICG00000013495
N
0.000
SHARPIN
Monodelphis domestica
ENSMODG00000010491
N
0.815
RBCK1
Monodelphis domestica
ENSMODG00000019512
N
0.000
Rbck1
Mus musculus
ENSMUSG00000027466
N
0.000
RBCK1
Oryctolagus cuniculus
ENSOCUG00000007636
N
0.000
ENSORLG00000017281
Oryzias latipes
ENSORLG00000017281
N
0.000
RBCK1
Pan troglodytes
ENSPTRG00000013144
N
0.000
ENSPPYG00000010868
Pongo pygmaeus
ENSPPYG00000010868
N
0.000
RBCK1
Procavia capensis
ENSPCAG00000001109
N
0.000
RBCK1
Pteropus vampyrus
ENSPVAG00000011249
N
0.000
Rbck1
Rattus norvegicus
ENSRNOG00000006695
N
0.000
RBCK1
Spermophilus tridecemlineatus
ENSSTOG00000008625
N
0.000
SHARPIN
Sus scrofa
ENSSSCG00000005914
N
0.923
ENSTRUG00000006949
Takifugu rubripes
ENSTRUG00000006949
N
0.769
ENSTRUG00000011046
Takifugu rubripes
ENSTRUG00000011046
N
0.000
ENSTNIG00000008521
Tetraodon nigroviridis
ENSTNIG00000008521
N
0.000
RBCK1
Tupaia belangeri
ENSTBEG00000013740
N
0.000
RBCK1
Tursiops truncatus
ENSTTRG00000005104
N
0.000
RBCK1
Vicugna pacos
ENSVPAG00000000451
N
0.000