AGAP002296 (Anopheles gambiae)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 AGAP002296 T32474_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
orb2
M120_0.6 		Drosophila melanogaster KUUUKKK RNAcompete
Ray et al.(2013)
RNCMPT00126 		0.870
CPEB2
M012_0.6 		Homo sapiens CHUUUUU RNAcompete
Ray et al.(2013)
RNCMPT00012 		0.841
CPEB4
M149_0.6 		Homo sapiens UUUUUU RNAcompete
Ray et al.(2013)
RNCMPT00158 		0.810
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
AGAP002296-PA RRM 96 158
AGAP002296-PA RRM 204 268

Links

Other RRM family RBPs
Other Anopheles gambiae RBPs

145 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAEL012065 Aedes aegypti AAEL012065 I 0.863
PASA_GEN_0800168 Daphnia pulex PASA_GEN_0800168 I 0.857
GH16131 Drosophila grimshawi FBgn0123602 I 0.848
GK17460 Drosophila willistoni FBgn0219459 I 0.842
GE21274 Drosophila yakuba FBgn0238542 I 0.842
orb2 Drosophila melanogaster FBgn0262573 D 0.842
GJ12289 Drosophila virilis FBgn0199538 I 0.842
GL20808 Drosophila persimilis FBgn0158403 I 0.842
GG15051 Drosophila erecta FBgn0107305 I 0.842
GA19094-RA Drosophila pseudoobscura FBgn0079092 I 0.842
GF10140 Drosophila ananassae FBgn0087181 I 0.842
GI12400 Drosophila mojavensis FBgn0135157 I 0.842
PHUM335520 Pediculus humanus PHUM335520 I 0.841
DGIL_AUG5s10609g1t1 Acyrtosiphon pisum DGIL_AUG5s10609g1t1 I 0.841
fgeneshTA2_pg.C_scaffold_8000081 Trichoplax adhaerens fgeneshTA2_pg.C_scaffold_8000081 I 0.838
ENSCING00000001633 Ciona intestinalis ENSCING00000001633 I 0.835
CPEB2 Gasterosteus aculeatus ENSGACG00000013966 I 0.835
CPEB2 Takifugu rubripes ENSTRUG00000013956 I 0.828
CPEB2 Tetraodon nigroviridis ENSTNIG00000017678 I 0.828
amel4_ncbi_hmm4978 Apis mellifera amel4_ncbi_hmm4978 I 0.828
fgenesh2_pg.scaffold_143000050 Branchiostoma floridae fgenesh2_pg.scaffold_143000050 I 0.828
CPEB2 Oryzias latipes ENSORLG00000016222 I 0.828
CPEB2 Bos taurus ENSBTAG00000019847 I 0.827
CPEB2 Loxodonta africana ENSLAFG00000007142 I 0.827
CPEB2 Tursiops truncatus ENSTTRG00000003940 I 0.827
ENSACAG00000012015 Anolis carolinensis ENSACAG00000012015 I 0.827
CPEB2 Macropus eugenii ENSMEUG00000008074 I 0.827
Ame_R004097 Ailuropoda melanoleuca Ame_R004097 I 0.827
CPEB2 Macaca mulatta ENSMMUG00000001384 I 0.827
CPEB2 Taeniopygia guttata ENSTGUG00000009822 I 0.827
CPEB2 Otolemur garnettii ENSOGAG00000011237 I 0.827
CPEB2 Sus scrofa ENSSSCG00000008736 I 0.827
ENSPPYG00000014613 Pongo pygmaeus ENSPPYG00000014613 I 0.827
CPEB2 Oryctolagus cuniculus ENSOCUG00000007950 I 0.827
CPEB2 Ornithorhynchus anatinus ENSOANG00000003552 I 0.827
XR_025355.1 Pan troglodytes ENSPTRG00000015924 I 0.827
Cpeb2 Mus musculus ENSMUSG00000039782 I 0.827
CPEB2 Monodelphis domestica ENSMODG00000001149 I 0.827
CPEB2 Meleagris gallopavo ENSMGAG00000005200 I 0.827
CPEB2 Equus caballus ENSECAG00000008722 I 0.827
LOC100402805 Callithrix jacchus ENSCJAG00000012227 I 0.827
CPEB2 Homo sapiens ENSG00000137449 D 0.827
Cpeb2 Dipodomys ordii ENSDORG00000015311 I 0.827
CPEB2 Canis familiaris ENSCAFG00000015372 I 0.827
CPEB2 Gorilla gorilla ENSGGOG00000004449 I 0.827
CPEB2 Cavia porcellus ENSCPOG00000001180 I 0.827
CPEB2 Gallus gallus ENSGALG00000014516 I 0.827
CPEB2 Choloepus hoffmanni ENSCHOG00000003058 I 0.827
e_gw1.24.94.1 Capitella teleta e_gw1.24.94.1 I 0.823
ISCW010113 Ixodes scapularis ISCW010113 I 0.822
gw.572.2.1 Branchiostoma floridae gw.572.2.1 I 0.822
BGIBMGA001827 Bombyx mori BGIBMGA001827 I 0.821
e_gw1.21.3.1 Lottia gigantea e_gw1.21.3.1 I 0.809
e_gw.6.76.1 Nematostella vectensis e_gw.6.76.1 I 0.805
nasonia_NCBI_hmm338954 Nasonia vitripennis nasonia_NCBI_hmm338954 I 0.804
CPEB3 Oryzias latipes ENSORLG00000000726 I 0.804
CPEB2 Pteropus vampyrus ENSPVAG00000007732 I 0.803
XP_001187928.1 Strongylocentrotus purpuratus XP_001187928.1 I 0.800
XP_789277.1 Strongylocentrotus purpuratus XP_789277.1 I 0.800
CPEB3 Gasterosteus aculeatus ENSGACG00000002944 I 0.799
ADH10187 Xenopus laevis ADH10187 I 0.797
CPEB4 Pan troglodytes ENSPTRG00000017545 I 0.797
Cpeb4 Rattus norvegicus ENSRNOG00000033169 I 0.797
D3ZHK8_RAT Rattus norvegicus ENSRNOG00000005043 I 0.797
Cpeb3 Rattus norvegicus ENSRNOG00000020689 I 0.797
CPEB4 Pteropus vampyrus ENSPVAG00000007863 I 0.797
CPEB3 Tupaia belangeri ENSTBEG00000013125 I 0.797
cpeb3 Xenopus tropicalis ENSXETG00000012190 I 0.797
CPEB4 Takifugu rubripes ENSTRUG00000010947 I 0.797
Ame_R004815 Ailuropoda melanoleuca Ame_R004815 I 0.797
CPEB4 Tarsius syrichta ENSTSYG00000003136 I 0.797
CPEB4 Tetraodon nigroviridis ENSTNIG00000017077 I 0.797
CPEB3 Taeniopygia guttata ENSTGUG00000008988 I 0.797
CPEB4 Tupaia belangeri ENSTBEG00000001429 I 0.797
Ame_R003954 Ailuropoda melanoleuca Ame_R003954 I 0.797
CPEB4 Taeniopygia guttata ENSTGUG00000000329 I 0.797
CPEB3 Sus scrofa ENSSSCG00000010468 I 0.797
CPEB4 Procavia capensis ENSPCAG00000007021 I 0.797
LOC100392612 Callithrix jacchus ENSCJAG00000008495 I 0.797
CPEB4 Callithrix jacchus ENSCJAG00000019166 I 0.797
CPEB3 Microcebus murinus ENSMICG00000017842 I 0.797
CPEB4 Myotis lucifugus ENSMLUG00000014640 I 0.797
CPEB3 Macaca mulatta ENSMMUG00000015050 I 0.797
CPEB4 Homo sapiens ENSG00000113742 D 0.797
CPEB4 Monodelphis domestica ENSMODG00000006036 I 0.797
CPEB4 Erinaceus europaeus ENSEEUG00000010887 I 0.797
CPEB3 Meleagris gallopavo ENSMGAG00000009148 I 0.797
CPEB4 Cavia porcellus ENSCPOG00000015530 I 0.797
CPEB4 Gorilla gorilla ENSGGOG00000010097 I 0.797
CPEB3 Gallus gallus ENSGALG00000006912 I 0.797
CPEB3 Homo sapiens ENSG00000107864 I 0.797
CPEB3 Gorilla gorilla ENSGGOG00000016441 I 0.797
CPEB4 Loxodonta africana ENSLAFG00000016030 I 0.797
CPEB3 Pan troglodytes ENSPTRG00000002753 I 0.797
CPEB3 Macropus eugenii ENSMEUG00000009948 I 0.797
CPEB3 Loxodonta africana ENSLAFG00000018716 I 0.797
Cpeb4 Mus musculus ENSMUSG00000020300 I 0.797
CPEB3 Monodelphis domestica ENSMODG00000006673 I 0.797
LOC100058918 Equus caballus ENSECAG00000016921 I 0.797
A7Z087_BOVIN Bos taurus ENSBTAG00000009995 I 0.797
CPEB3 Bos taurus ENSBTAG00000015450 I 0.797
CPEB3 Echinops telfairi ENSETEG00000000111 I 0.797
CPEB3 Anolis carolinensis ENSACAG00000006335 I 0.797
CPEB4 Anolis carolinensis ENSACAG00000015039 I 0.797
ENSPPYG00000016058 Pongo pygmaeus ENSPPYG00000016058 I 0.797
ENSPPYG00000002481 Pongo pygmaeus ENSPPYG00000002481 I 0.797
CPEB4 Otolemur garnettii ENSOGAG00000004243 I 0.797
CPEB4 Ochotona princeps ENSOPRG00000002868 I 0.797
CPEB3 Canis familiaris ENSCAFG00000007423 I 0.797
CPEB4 Oryctolagus cuniculus ENSOCUG00000008971 I 0.797
Cpeb3 Mus musculus ENSMUSG00000039652 I 0.797
CPEB3 Oryctolagus cuniculus ENSOCUG00000010454 I 0.797
CPEB3 Equus caballus ENSECAG00000000077 I 0.791
cpeb3 Danio rerio ENSDARG00000060103 I 0.791
CPEB3 Choloepus hoffmanni ENSCHOG00000000272 I 0.791
CPEB3 Ornithorhynchus anatinus ENSOANG00000015723 I 0.791
CPEB4 Spermophilus tridecemlineatus ENSSTOG00000006077 I 0.791
CPEB3 Sorex araneus ENSSARG00000001994 I 0.791
CPEB4 Canis familiaris ENSCAFG00000016761 I 0.791
CPEB4 Danio rerio ENSDARG00000060495 I 0.790
CPEB4 Macaca mulatta ENSMMUG00000019926 I 0.790
CPEB4 Oryzias latipes ENSORLG00000001711 I 0.790
CPEB4 Takifugu rubripes ENSTRUG00000010692 I 0.790
CPEB4 Gasterosteus aculeatus ENSGACG00000018422 I 0.790
CPEB4 Gasterosteus aculeatus ENSGACG00000020430 I 0.790
CPEB4 Oryzias latipes ENSORLG00000007328 I 0.790
111676 Helobdella robusta 111676 I 0.789
CPEB4 Meleagris gallopavo ENSMGAG00000003660 I 0.786
CPEB3 Tetraodon nigroviridis ENSTNIG00000004021 I 0.786
CPEB4 Ornithorhynchus anatinus ENSOANG00000003990 I 0.786
CPEB3 Takifugu rubripes ENSTRUG00000011309 I 0.786
CPEB4 Gallus gallus ENSGALG00000014074 I 0.786
CPEB4 Sorex araneus ENSSARG00000013389 I 0.783
CPEB3 Pteropus vampyrus ENSPVAG00000007664 I 0.782
SNAPOd2T00005918001 Oikopleura dioica SNAPOd2T00005918001 I 0.781
cpeb2 Xenopus tropicalis ENSXETG00000020324 I 0.776
XP_002159261.1 Hydra magnipapillata XP_002159261.1 I 0.770
79994 Helobdella robusta 79994 I 0.752
CPEB2 Danio rerio ENSDARG00000052604 I 0.739
CPEB2 Vicugna pacos ENSVPAG00000006185 I 0.737
CPEB2 Sorex araneus ENSSARG00000010559 I 0.737
CPEB3 Tursiops truncatus ENSTTRG00000012334 I 0.732
69117 Helobdella robusta 69117 N 0.729
CPEB3 Procavia capensis ENSPCAG00000012417 I 0.725
CPEB4 Vicugna pacos ENSVPAG00000010897 I 0.725