tia1l (Danio rerio)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSDARG00000026476 T36111_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
TIA1
M156_0.6 		Homo sapiens WUUUUUB RNAcompete
Ray et al.(2013)
RNCMPT00165 		0.863
TIA1
M075_0.6 		Homo sapiens UUUUUBK RNAcompete
Ray et al.(2013)
RNCMPT00077 		0.863
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000018009 RRM 11 79
ENSDARP00000018009 RRM 99 169
ENSDARP00000018009 RRM 208 272

Links

Other RRM family RBPs
Other Danio rerio RBPs

67 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH77169 Xenopus laevis AAH77169 I 0.859
AAH80105 Xenopus laevis AAH80105 I 0.844
Ame_R002705 Ailuropoda melanoleuca Ame_R002705 I 0.863
CAC95018 Xenopus laevis CAC95018 I 0.859
ENSACAG00000009648 Anolis carolinensis ENSACAG00000009648 I 0.868
TIAL1 Anolis carolinensis ENSACAG00000016986 I 0.839
A1A4R7_BOVIN Bos taurus ENSBTAG00000004080 I 0.859
Q0VBZ6_BOVIN Bos taurus ENSBTAG00000019182 I 0.868
TIA1 Canis familiaris ENSCAFG00000003341 I 0.863
TIAL1 Canis familiaris ENSCAFG00000012171 I 0.793
TIA1 Callithrix jacchus ENSCJAG00000019278 I 0.863
TIAL1 Callithrix jacchus ENSCJAG00000019682 I 0.793
TIA1 Cavia porcellus ENSCPOG00000008327 I 0.863
tial1 Danio rerio ENSDARG00000009525 I 0.844
tia1 Danio rerio ENSDARG00000052536 I 0.849
TIAL1 Dasypus novemcinctus ENSDNOG00000009552 I 0.700
TIA1 Dasypus novemcinctus ENSDNOG00000016356 I 0.863
Tia1 Dipodomys ordii ENSDORG00000008601 I 0.810
Tial1 Dipodomys ordii ENSDORG00000010683 I 0.743
TIAL1 Equus caballus ENSECAG00000009970 I 0.859
TIA1 Echinops telfairi ENSETEG00000010021 I 0.863
TIA1 Homo sapiens ENSG00000116001 D 0.863
TIAL1 Homo sapiens ENSG00000151923 D 0.859
TIAL1 Gasterosteus aculeatus ENSGACG00000003365 I 0.835
TIA1 Gasterosteus aculeatus ENSGACG00000013294 I 0.800
TIA1 Gasterosteus aculeatus ENSGACG00000015800 I 0.839
Q800W1_CHICK Gallus gallus ENSGALG00000009427 I 0.793
Q800W4_CHICK Gallus gallus ENSGALG00000013879 I 0.863
TIA1 Loxodonta africana ENSLAFG00000003463 I 0.868
TIA1 Meleagris gallopavo ENSMGAG00000003493 I 0.859
TIA1 Macaca mulatta ENSMMUG00000001126 I 0.863
TIAL1 Macaca mulatta ENSMMUG00000001472 I 0.859
TIAL1 Monodelphis domestica ENSMODG00000008865 I 0.793
TIA1 Monodelphis domestica ENSMODG00000011515 I 0.868
Tial1 Mus musculus ENSMUSG00000030846 I 0.859
Tia1 Mus musculus ENSMUSG00000071337 I 0.863
TIAL1 Ornithorhynchus anatinus ENSOANG00000004896 I 0.727
TIAL1 Oryctolagus cuniculus ENSOCUG00000003783 I 0.854
TIA1 Oryctolagus cuniculus ENSOCUG00000011204 I 0.863
TIA1 Otolemur garnettii ENSOGAG00000010572 I 0.863
TIA1 Oryzias latipes ENSORLG00000002529 I 0.844
TIAL1 Oryzias latipes ENSORLG00000013798 I 0.834
TIA1 Oryzias latipes ENSORLG00000015642 I 0.844
TIAL1 Procavia capensis ENSPCAG00000003192 I 0.788
ENSPPYG00000002703 Pongo pygmaeus ENSPPYG00000002703 I 0.793
ENSPPYG00000012326 Pongo pygmaeus ENSPPYG00000012326 I 0.854
TIAL1 Pan troglodytes ENSPTRG00000002996 I 0.793
TIA1 Pan troglodytes ENSPTRG00000023495 I 0.863
TIA1 Pteropus vampyrus ENSPVAG00000004846 I 0.863
TIAL1 Pteropus vampyrus ENSPVAG00000017585 I 0.793
Tia1 Rattus norvegicus ENSRNOG00000016813 I 0.859
Tial1 Rattus norvegicus ENSRNOG00000020271 I 0.793
TIA1 Sorex araneus ENSSARG00000001997 I 0.722
ENSSSCG00000010685 Sus scrofa ENSSSCG00000010685 I 0.859
ENSTBEG00000017228 Tupaia belangeri ENSTBEG00000017228 I 0.776
TIA1 Taeniopygia guttata ENSTGUG00000017307 I 0.834
TIA1 Tetraodon nigroviridis ENSTNIG00000011433 I 0.854
TIA1 Tetraodon nigroviridis ENSTNIG00000013470 I 0.829
TIA1 Takifugu rubripes ENSTRUG00000005456 I 0.829
TIA1 Takifugu rubripes ENSTRUG00000015136 I 0.854
TIAL1 Takifugu rubripes ENSTRUG00000017931 I 0.732
TIAL1 Tarsius syrichta ENSTSYG00000004348 I 0.793
TIA1 Tursiops truncatus ENSTTRG00000001195 I 0.863
TIAL1 Vicugna pacos ENSVPAG00000001240 I 0.756
tia1 Xenopus tropicalis ENSXETG00000008514 I 0.849
estExt_fgenesh2_pg.C_1430023 Branchiostoma floridae estExt_fgenesh2_pg.C_1430023 I 0.746
gw.406.24.1 Branchiostoma floridae gw.406.24.1 I 0.741