ENSCAFG00000025274 (Canis familiaris)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCAFG00000025274 T35224_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPA1
M312_0.6 		Homo sapiens Sequence logo not available UAGGGW RIP-chip
Cook et al.(2011)
560_17925491 		0.887
HNRNPA1
M271_0.6 		Homo sapiens UAGGGW SELEX
Cook et al.(2011)
23_7510636 		0.887
HNRNPA1
M022_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00022 		0.887
HNRNPA1L2
M023_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00023 		0.865
HNRNPA2B1
M024_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00024 		0.738
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCAFP00000035009 RRM 9 78
ENSCAFP00000035009 RRM 100 169

Links

Other RRM family RBPs
Other Canis familiaris RBPs

239 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSCJAG00000033856 Callithrix jacchus ENSCJAG00000033856 I 0.887
ROA1_PANTR Pan troglodytes ENSPTRG00000031363 I 0.887
Hnrnpa1 Mus musculus ENSMUSG00000046434 I 0.887
ENSTTRG00000004505 Tursiops truncatus ENSTTRG00000004505 I 0.887
ROA1_PANTR Pan troglodytes ENSPTRG00000028756 I 0.887
ENSMLUG00000000648 Myotis lucifugus ENSMLUG00000000648 I 0.887
ENSPVAG00000000322 Pteropus vampyrus ENSPVAG00000000322 I 0.887
HNRNPA1L2 Pan troglodytes ENSPTRG00000032520 I 0.887
ENSGGOG00000025381 Gorilla gorilla ENSGGOG00000025381 I 0.887
ENSDNOG00000009228 Dasypus novemcinctus ENSDNOG00000009228 I 0.887
HNRNPA1 Gorilla gorilla ENSGGOG00000003040 I 0.887
XM_534786.2 Canis familiaris ENSCAFG00000006580 I 0.887
HNRNPA1 Homo sapiens ENSG00000135486 D 0.887
ROA1_BOVIN Bos taurus ENSBTAG00000001553 I 0.887
ENSG00000215492 Homo sapiens ENSG00000215492 I 0.887
ENSFCAG00000010150 Felis catus ENSFCAG00000010150 I 0.887
Ame_R011792 Ailuropoda melanoleuca Ame_R011792 I 0.887
Q6DTK6_HORSE Equus caballus ENSECAG00000008676 I 0.887
ROA1_PANTR Pan troglodytes ENSPTRG00000005035 I 0.887
LOC710473 Macaca mulatta ENSMMUG00000012989 I 0.887
ENSOCUG00000021007 Oryctolagus cuniculus ENSOCUG00000021007 I 0.887
ENSOCUG00000013350 Oryctolagus cuniculus ENSOCUG00000013350 I 0.887
Hnrnpa1 Rattus norvegicus ENSRNOG00000036839 I 0.887
ENSOCUG00000023444 Oryctolagus cuniculus ENSOCUG00000023444 I 0.887
ENSSSCG00000000288 Sus scrofa ENSSSCG00000000288 I 0.887
ENSOCUG00000023674 Oryctolagus cuniculus ENSOCUG00000023674 I 0.887
ENSCJAG00000019479 Callithrix jacchus ENSCJAG00000019479 I 0.887
ENSTBEG00000008238 Tupaia belangeri ENSTBEG00000008238 I 0.887
LOC100397230 Callithrix jacchus ENSCJAG00000018864 I 0.887
ROA1_MACMU Macaca mulatta ENSMMUG00000031613 I 0.879
LOC710473 Macaca mulatta ENSMMUG00000029402 I 0.879
ENSOCUG00000022568 Oryctolagus cuniculus ENSOCUG00000022568 I 0.879
ENSOCUG00000028124 Oryctolagus cuniculus ENSOCUG00000028124 I 0.879
ENSOPRG00000006107 Ochotona princeps ENSOPRG00000006107 I 0.879
ENSLAFG00000029587 Loxodonta africana ENSLAFG00000029587 I 0.879
ENSOCUG00000010985 Oryctolagus cuniculus ENSOCUG00000010985 I 0.879
LOC710473 Macaca mulatta ENSMMUG00000007887 I 0.879
LOC710473 Macaca mulatta ENSMMUG00000007928 I 0.879
LOC100397230 Callithrix jacchus ENSCJAG00000004031 I 0.879
ENSOGAG00000009945 Otolemur garnettii ENSOGAG00000009945 I 0.872
ENSACAG00000007169 Anolis carolinensis ENSACAG00000007169 I 0.872
ENSEEUG00000006130 Erinaceus europaeus ENSEEUG00000006130 I 0.872
ENSMLUG00000003232 Myotis lucifugus ENSMLUG00000003232 I 0.872
ENSCAFG00000010153 Canis familiaris ENSCAFG00000010153 I 0.872
ENSOCUG00000023322 Oryctolagus cuniculus ENSOCUG00000023322 I 0.872
LOC785445 Bos taurus ENSBTAG00000025621 I 0.871
ENSTBEG00000016272 Tupaia belangeri ENSTBEG00000016272 I 0.871
ENSCJAG00000016375 Callithrix jacchus ENSCJAG00000016375 I 0.871
ENSLAFG00000026657 Loxodonta africana ENSLAFG00000026657 I 0.865
ENSOCUG00000022668 Oryctolagus cuniculus ENSOCUG00000022668 I 0.865
HNRNPA1L2 Homo sapiens ENSG00000139675 D 0.865
LOC100413454 Callithrix jacchus ENSCJAG00000009030 I 0.865
XM_852631.1 Canis familiaris ENSCAFG00000023680 I 0.865
LOC100409067 Callithrix jacchus ENSCJAG00000003245 I 0.865
ENSRNOG00000033182 Rattus norvegicus ENSRNOG00000033182 I 0.859
ENSCPOG00000021077 Cavia porcellus ENSCPOG00000021077 I 0.858
ENSCJAG00000031552 Callithrix jacchus ENSCJAG00000031552 I 0.858
LOC100410389 Callithrix jacchus ENSCJAG00000023392 I 0.858
ENSMUSG00000021927 Mus musculus ENSMUSG00000021927 I 0.858
ENSPPYG00000017853 Pongo pygmaeus ENSPPYG00000017853 I 0.858
ENSOCUG00000021006 Oryctolagus cuniculus ENSOCUG00000021006 I 0.858
ENSTBEG00000012511 Tupaia belangeri ENSTBEG00000012511 I 0.857
ENSRNOG00000039436 Rattus norvegicus ENSRNOG00000039436 I 0.851
D4A491_RAT Rattus norvegicus ENSRNOG00000029531 I 0.851
ENSCAFG00000002059 Canis familiaris ENSCAFG00000002059 I 0.850
ENSOCUG00000022627 Oryctolagus cuniculus ENSOCUG00000022627 I 0.850
ENSCAFG00000005207 Canis familiaris ENSCAFG00000005207 I 0.850
ENSCJAG00000010169 Callithrix jacchus ENSCJAG00000010169 I 0.850
ENSRNOG00000011100 Rattus norvegicus ENSRNOG00000011100 I 0.850
ENSMGAG00000007630 Meleagris gallopavo ENSMGAG00000007630 I 0.845
ENSCAFG00000006784 Canis familiaris ENSCAFG00000006784 I 0.844
ENSCJAG00000004902 Callithrix jacchus ENSCJAG00000004902 I 0.844
ENSEEUG00000000494 Erinaceus europaeus ENSEEUG00000000494 I 0.844
ENSLAFG00000030769 Loxodonta africana ENSLAFG00000030769 I 0.844
ENSCJAG00000032417 Callithrix jacchus ENSCJAG00000032417 I 0.844
AAH45260 Xenopus laevis AAH45260 I 0.844
D4A2D2_RAT Rattus norvegicus ENSRNOG00000021986 I 0.844
hnrnpa1 Xenopus tropicalis ENSXETG00000021277 I 0.844
XM_854536.1 Canis familiaris ENSCAFG00000005046 I 0.844
ENSRNOG00000005951 Rattus norvegicus ENSRNOG00000005951 I 0.844
LOC100397230 Callithrix jacchus ENSCJAG00000014791 I 0.843
ENSCJAG00000000095 Callithrix jacchus ENSCJAG00000000095 I 0.843
ENSMMUG00000031948 Macaca mulatta ENSMMUG00000031948 I 0.843
ENSCJAG00000009723 Callithrix jacchus ENSCJAG00000009723 I 0.837
CBU92546 Xenopus laevis CBU92546 I 0.837
AAH72090 Xenopus laevis AAH72090 I 0.837
CBF67672 Xenopus laevis CBF67672 I 0.837
ENSCJAG00000035202 Callithrix jacchus ENSCJAG00000035202 I 0.836
ENSCJAG00000007250 Callithrix jacchus ENSCJAG00000007250 I 0.836
ENSRNOG00000021280 Rattus norvegicus ENSRNOG00000021280 I 0.836
ENSGGOG00000025827 Gorilla gorilla ENSGGOG00000025827 I 0.836
D4AD23_RAT Rattus norvegicus ENSRNOG00000025891 I 0.836
ENSMMUG00000007695 Macaca mulatta ENSMMUG00000007695 I 0.836
XP_541811.1 Canis familiaris ENSCAFG00000006586 I 0.836
ENSCAFG00000005308 Canis familiaris ENSCAFG00000005308 I 0.832
XM_855847.1 Canis familiaris ENSCAFG00000006327 I 0.830
ENSCAFG00000007879 Canis familiaris ENSCAFG00000007879 I 0.825
ENSCAFG00000011035 Canis familiaris ENSCAFG00000011035 I 0.824
ENSCAFG00000007198 Canis familiaris ENSCAFG00000007198 I 0.823
AAA49741 Xenopus laevis AAA49741 I 0.823
P17130 Xenopus laevis P17130 I 0.823
CBF67555 Xenopus laevis CBF67555 I 0.823
AAA49742 Xenopus laevis AAA49742 I 0.823
CBU92428 Xenopus laevis CBU92428 I 0.823
Ame_R018030 Ailuropoda melanoleuca Ame_R018030 I 0.821
ENSETEG00000015332 Echinops telfairi ENSETEG00000015332 I 0.821
ENSCJAG00000020672 Callithrix jacchus ENSCJAG00000020672 I 0.821
ENSCAFG00000004202 Canis familiaris ENSCAFG00000004202 I 0.817
LOC100054206 Equus caballus ENSECAG00000006699 I 0.817
ENSCAFG00000019104 Canis familiaris ENSCAFG00000019104 I 0.817
ENSGACG00000009435 Gasterosteus aculeatus ENSGACG00000009435 I 0.816
ENSGGOG00000027879 Gorilla gorilla ENSGGOG00000027879 I 0.814
ENSCJAG00000001737 Callithrix jacchus ENSCJAG00000001737 I 0.814
ENSSTOG00000015259 Spermophilus tridecemlineatus ENSSTOG00000015259 I 0.814
ENSCAFG00000014094 Canis familiaris ENSCAFG00000014094 I 0.814
ENSCJAG00000033784 Callithrix jacchus ENSCJAG00000033784 I 0.814
XP_848548.1 Canis familiaris ENSCAFG00000016313 I 0.814
ENSMLUG00000000788 Myotis lucifugus ENSMLUG00000000788 I 0.810
ENSCJAG00000001353 Callithrix jacchus ENSCJAG00000001353 I 0.810
XM_543834.2 Canis familiaris ENSCAFG00000002157 I 0.810
ENSCAFG00000005164 Canis familiaris ENSCAFG00000005164 I 0.810
ENSMMUG00000018397 Macaca mulatta ENSMMUG00000018397 I 0.807
ENSCAFG00000019118 Canis familiaris ENSCAFG00000019118 I 0.804
ENSCAFG00000015319 Canis familiaris ENSCAFG00000015319 I 0.803
XR_010472.1 Macaca mulatta ENSMMUG00000012991 I 0.803
ENSSARG00000008946 Sorex araneus ENSSARG00000008946 I 0.801
Hnrnpa1 Dipodomys ordii ENSDORG00000010628 I 0.801
ENSRNOG00000023438 Rattus norvegicus ENSRNOG00000023438 I 0.800
ENSCAFG00000020238 Canis familiaris ENSCAFG00000020238 I 0.796
ENSCAFG00000018186 Canis familiaris ENSCAFG00000018186 I 0.796
ENSORLG00000008001 Oryzias latipes ENSORLG00000008001 I 0.794
ENSCJAG00000017130 Callithrix jacchus ENSCJAG00000017130 I 0.793
ENSCJAG00000032970 Callithrix jacchus ENSCJAG00000032970 I 0.793
ENSSSCG00000005428 Sus scrofa ENSSSCG00000005428 I 0.793
ENSEEUG00000009941 Erinaceus europaeus ENSEEUG00000009941 I 0.793
ENSCAFG00000024951 Canis familiaris ENSCAFG00000024951 I 0.790
ENSMICG00000009289 Microcebus murinus ENSMICG00000009289 I 0.789
XM_001106745.1 Macaca mulatta ENSMMUG00000031809 I 0.789
ENSCAFG00000003493 Canis familiaris ENSCAFG00000003493 I 0.789
ENSMODG00000006291 Monodelphis domestica ENSMODG00000006291 I 0.788
ENSCAFG00000001973 Canis familiaris ENSCAFG00000001973 I 0.782
hnrnpa3 Xenopus tropicalis ENSXETG00000001806 I 0.780
ENSGGOG00000025265 Gorilla gorilla ENSGGOG00000025265 I 0.779
ENSEEUG00000011837 Erinaceus europaeus ENSEEUG00000011837 I 0.779
ENSMODG00000023422 Monodelphis domestica ENSMODG00000023422 I 0.775
P51968 Xenopus laevis P51968 I 0.773
AAA49949 Xenopus laevis AAA49949 I 0.773
HNRNPA3 Meleagris gallopavo ENSMGAG00000009565 I 0.773
HNRPA3 Gallus gallus ENSGALG00000009250 I 0.773
HNRNPA3 Taeniopygia guttata ENSTGUG00000008996 I 0.773
HNRNPA3 Anolis carolinensis ENSACAG00000012234 I 0.773
ENSPCAG00000001867 Procavia capensis ENSPCAG00000001867 I 0.771
AAA49950 Xenopus laevis AAA49950 I 0.769
P51992 Xenopus laevis P51992 I 0.769
CBF67578 Xenopus laevis CBF67578 I 0.769
CBU92451 Xenopus laevis CBU92451 I 0.769
AAI69881 Xenopus laevis AAI69881 I 0.769
HNRNPA3 Gorilla gorilla ENSGGOG00000006130 I 0.768
ENSMMUG00000001858 Macaca mulatta ENSMMUG00000001858 I 0.768
HNRNPA3 Pteropus vampyrus ENSPVAG00000010380 I 0.768
HNRNPA3 Homo sapiens ENSG00000170144 I 0.768
HNRNPA3 Macropus eugenii ENSMEUG00000013622 I 0.768
Hnrnpa3 Mus musculus ENSMUSG00000059005 I 0.768
LOC781499 Bos taurus ENSBTAG00000021580 I 0.768
HNRNPA3 Dasypus novemcinctus ENSDNOG00000019022 I 0.768
HNRNPA3 Myotis lucifugus ENSMLUG00000003906 I 0.768
HNRNPA3 Monodelphis domestica ENSMODG00000019803 I 0.768
LOC100360986 Rattus norvegicus ENSRNOG00000001556 I 0.768
HNRNPA3 Pan troglodytes ENSPTRG00000012676 I 0.768
ROA3_RAT Rattus norvegicus ENSRNOG00000027001 I 0.768
HNRNPA3 Tursiops truncatus ENSTTRG00000014225 I 0.768
HNRNPA3 Sus scrofa ENSSSCG00000015988 I 0.768
ENSCPOG00000004251 Cavia porcellus ENSCPOG00000004251 I 0.768
LOC100411573 Callithrix jacchus ENSCJAG00000023383 I 0.768
ENSCAFG00000013497 Canis familiaris ENSCAFG00000013497 I 0.768
HNRNPA3 Cavia porcellus ENSCPOG00000011301 I 0.768
LOC100066794 Equus caballus ENSECAG00000023237 I 0.766
Q1KKU4_FUGRU Takifugu rubripes ENSTRUG00000002190 I 0.766
HNRNPA3 Felis catus ENSFCAG00000012146 I 0.766
Gm8991 Mus musculus ENSMUSG00000059179 I 0.766
ENSCAFG00000014691 Canis familiaris ENSCAFG00000014691 I 0.766
ENSCAFG00000024824 Canis familiaris ENSCAFG00000024824 I 0.761
HNRNPA3 Oryctolagus cuniculus ENSOCUG00000002743 I 0.761
ENSCJAG00000001302 Callithrix jacchus ENSCJAG00000001302 I 0.761
D3ZXA3_RAT Rattus norvegicus ENSRNOG00000038905 I 0.759
ENSTNIG00000015047 Tetraodon nigroviridis ENSTNIG00000015047 I 0.752
ENSMMUG00000005993 Macaca mulatta ENSMMUG00000005993 I 0.750
XR_011984.1 Macaca mulatta ENSMMUG00000011640 I 0.750
ENSCAFG00000017316 Canis familiaris ENSCAFG00000017316 I 0.748
ENSMMUG00000022448 Macaca mulatta ENSMMUG00000022448 I 0.747
D3ZTB7_RAT Rattus norvegicus ENSRNOG00000031608 I 0.745
hnrnpa1 Danio rerio ENSDARG00000036675 I 0.745
hnrnpa3 Danio rerio ENSDARG00000059351 I 0.745
ENSCAFG00000008301 Canis familiaris ENSCAFG00000008301 I 0.741
HNRNPA3 Oryzias latipes ENSORLG00000017561 I 0.741
ENSLAFG00000029171 Loxodonta africana ENSLAFG00000029171 I 0.741
ENSPPYG00000001012 Pongo pygmaeus ENSPPYG00000001012 I 0.739
ENSCAFG00000017494 Canis familiaris ENSCAFG00000017494 I 0.738
ENSCAFG00000008379 Canis familiaris ENSCAFG00000008379 I 0.738
ENSMMUG00000013424 Macaca mulatta ENSMMUG00000013424 I 0.738
ENSCAFG00000009412 Canis familiaris ENSCAFG00000009412 I 0.736
XM_844664.1 Canis familiaris ENSCAFG00000000687 I 0.735
HNRNPA3 Gasterosteus aculeatus ENSGACG00000004477 I 0.734
ENSCAFG00000006036 Canis familiaris ENSCAFG00000006036 I 0.731
ENSMMUG00000008337 Macaca mulatta ENSMMUG00000008337 I 0.731
zgc:66127 Danio rerio ENSDARG00000011020 I 0.730
ENSCJAG00000005326 Callithrix jacchus ENSCJAG00000005326 I 0.729
ENSCJAG00000007639 Callithrix jacchus ENSCJAG00000007639 I 0.729
D3ZNE1_RAT Rattus norvegicus ENSRNOG00000005671 I 0.727
ENSPPYG00000012967 Pongo pygmaeus ENSPPYG00000012967 I 0.725
ENSOGAG00000017179 Otolemur garnettii ENSOGAG00000017179 I 0.724
HNRNPA3 Tetraodon nigroviridis ENSTNIG00000016958 I 0.723
HNRNPA3 Sorex araneus ENSSARG00000007605 I 0.723
ENSCAFG00000003418 Canis familiaris ENSCAFG00000003418 I 0.721
Q1KKS6_FUGRU Takifugu rubripes ENSTRUG00000017504 I 0.720
ENSCAFG00000009606 Canis familiaris ENSCAFG00000009606 I 0.719
Ame_R015370 Ailuropoda melanoleuca Ame_R015370 I 0.719
ENSCJAG00000008584 Callithrix jacchus ENSCJAG00000008584 I 0.718
ENSPPYG00000003855 Pongo pygmaeus ENSPPYG00000003855 I 0.717
ENSETEG00000001872 Echinops telfairi ENSETEG00000001872 I 0.716
ENSCAFG00000007918 Canis familiaris ENSCAFG00000007918 I 0.712
ENSCJAG00000007634 Callithrix jacchus ENSCJAG00000007634 I 0.712
ENSRNOG00000013650 Rattus norvegicus ENSRNOG00000013650 I 0.711
ENSRNOG00000042093 Rattus norvegicus ENSRNOG00000042093 I 0.711
ENSMMUG00000004528 Macaca mulatta ENSMMUG00000004528 I 0.710
ENSCAFG00000013303 Canis familiaris ENSCAFG00000013303 I 0.710
ENSCAFG00000019097 Canis familiaris ENSCAFG00000019097 I 0.709
ENSGGOG00000022020 Gorilla gorilla ENSGGOG00000022020 I 0.709
ENSSARG00000010620 Sorex araneus ENSSARG00000010620 I 0.709
ENSGGOG00000025446 Gorilla gorilla ENSGGOG00000025446 I 0.709
ENSCAFG00000006663 Canis familiaris ENSCAFG00000006663 I 0.707
ENSCJAG00000005407 Callithrix jacchus ENSCJAG00000005407 I 0.707
ENSSSCG00000015989 Sus scrofa ENSSSCG00000015989 I 0.704
ENSCAFG00000024812 Canis familiaris ENSCAFG00000024812 I 0.704
HNRNPA3 Loxodonta africana ENSLAFG00000027712 I 0.704
ENSCAFG00000023056 Canis familiaris ENSCAFG00000023056 I 0.703
ENSSARG00000008882 Sorex araneus ENSSARG00000008882 I 0.702
ENSPTRG00000018253 Pan troglodytes ENSPTRG00000018253 I 0.702
D3ZQR9_RAT Rattus norvegicus ENSRNOG00000027605 I 0.701