NCBP2_IXOSC (Ixodes scapularis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ISCW017479 T44882_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ISCW017479-PA RRM 30 100

Links

Other RRM family RBPs
Other Ixodes scapularis RBPs

173 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
2118330B Xenopus laevis 2118330B N 0.746
91084 Helobdella robusta 91084 N 0.761
NCBP2_AEDAE Aedes aegypti AAEL006135 N 0.746
AAH72902 Xenopus laevis AAH72902 N 0.761
NCBP2_ANOGA Anopheles gambiae AGAP002547 N 0.789
amel4_ncbi_hmm3188 Apis mellifera amel4_ncbi_hmm3188 N 0.803
Ame_R004608 Ailuropoda melanoleuca Ame_R004608 N 0.817
Aqu1.228507 Amphimedon queenslandica Aqu1.228507 N 0.761
BC1G_04395 Botrytis cinerea BC1G_04395 N 0.746
BDBG_08091 Blastomyces dermatitidis BDBG_08091 N 0.732
BGIBMGA007585 Bombyx mori BGIBMGA007585 N 0.789
Bm1_02935 Brugia malayi Bm1_02935 N 0.761
BRADI3G48560 Brachypodium distachyon BRADI3G48560 N 0.718
CAA59259 Xenopus laevis CAA59259 N 0.746
AFLA_046450 Aspergillus flavus CADAFLAG00005972 N 0.775
AFUA_2G08570 Aspergillus fumigatus CADAFUAG00004718 N 0.732
An12g03930 Aspergillus niger CADANGAG00009835 N 0.718
NFIA_084190 Neosartorya fischeri CADNFIAG00008064 N 0.732
CAOG_06930 Capsaspora owczarzaki CAOG_06930 N 0.704
cassava43645.valid.m1 Manihot esculenta cassava43645.valid.m1 N 0.718
cassava43646.valid.m1 Manihot esculenta cassava43646.valid.m1 N 0.718
CBG22194 Caenorhabditis briggsae CBG22194 N 0.704
CBN14593 Caenorhabditis brenneri CBN14593 N 0.704
chr3.CM0160.780.nd Lotus japonicus chr3.CM0160.780.nd N 0.732
CIMG_00837 Coccidioides immitis CIMG_00837 N 0.732
NCBP2_CULQU Culex quinquefasciatus CPIJ003555 N 0.732
CpipJ_CPIJ003555 Culex pipiens CpipJ_CPIJ003555 N 0.732
CPSG_08054 Coccidioides posadasii CPSG_08054 N 0.732
CRE20447 Caenorhabditis remanei CRE20447 N 0.704
Cucsa.174450 Cucumis sativus Cucsa.174450 N 0.718
ncbp2 Dictyostelium discoideum DDB_G0287197 N 0.718
DGIL_AUG5s12516g4t1 Acyrtosiphon pisum DGIL_AUG5s12516g4t1 N 0.775
DGIL_AUG5s15103g4t1 Acyrtosiphon pisum DGIL_AUG5s15103g4t1 N 0.746
EAT82863.2 Phaeosphaeria nodorum EAT82863.2 N 0.732
EFA74823.1 Polysphondylium pallidum EFA74823.1 N 0.761
ENSACAG00000015128 Anolis carolinensis ENSACAG00000015128 N 0.775
NCBP2_BOVIN Bos taurus ENSBTAG00000008873 N 0.817
NCBP2 Canis familiaris ENSCAFG00000013100 N 0.817
NCBP2L Canis familiaris ENSCAFG00000017990 N 0.718
ENSCHOG00000005967 Choloepus hoffmanni ENSCHOG00000005967 N 0.803
ENSCING00000003079 Ciona intestinalis ENSCING00000003079 N 0.775
ENSCING00000016926 Ciona intestinalis ENSCING00000016926 N 0.775
LOC100404338 Callithrix jacchus ENSCJAG00000013735 N 0.817
NCBP2 Cavia porcellus ENSCPOG00000002976 N 0.803
ENSCSAVG00000005823 Ciona savignyi ENSCSAVG00000005823 N 0.746
ncbp2 Danio rerio ENSDARG00000014898 N 0.789
NCBP2 Equus caballus ENSECAG00000016153 N 0.817
NCBP2 Homo sapiens ENSG00000114503 N 0.817
NCBP2 Gasterosteus aculeatus ENSGACG00000006238 N 0.704
NCBP2_CHICK Gallus gallus ENSGALG00000005753 N 0.789
NCBP2 Gallus gallus ENSGALG00000006843 N 0.789
NCBP2 Loxodonta africana ENSLAFG00000006372 N 0.817
NCBP2L Loxodonta africana ENSLAFG00000027581 N 0.761
ENSMEUG00000004730 Macropus eugenii ENSMEUG00000004730 N 0.803
ENSMEUG00000008126 Macropus eugenii ENSMEUG00000008126 N 0.817
ENSMGAG00000002257 Meleagris gallopavo ENSMGAG00000002257 N 0.789
ENSMGAG00000006728 Meleagris gallopavo ENSMGAG00000006728 N 0.789
NCBP2 Microcebus murinus ENSMICG00000003162 N 0.817
NCBP2 Myotis lucifugus ENSMLUG00000017500 N 0.817
NCBP2 Macaca mulatta ENSMMUG00000007825 N 0.817
XM_001373408.1 Monodelphis domestica ENSMODG00000015908 N 0.789
XM_001371285.1 Monodelphis domestica ENSMODG00000023276 N 0.817
XM_001367531.1 Monodelphis domestica ENSMODG00000024607 N 0.803
LOC100020122 Monodelphis domestica ENSMODG00000024608 N 0.803
Ncbp2 Mus musculus ENSMUSG00000022774 N 0.817
NCBP2 Oryctolagus cuniculus ENSOCUG00000006738 N 0.817
ENSOCUG00000014372 Oryctolagus cuniculus ENSOCUG00000014372 N 0.803
NCBP2 Otolemur garnettii ENSOGAG00000005009 N 0.817
ENSOPRG00000007634 Ochotona princeps ENSOPRG00000007634 N 0.803
NCBP2 Oryzias latipes ENSORLG00000011235 N 0.789
NCBP2 Procavia capensis ENSPCAG00000003219 N 0.803
ENSPPYG00000014449 Pongo pygmaeus ENSPPYG00000014449 N 0.817
NCBP2 Pan troglodytes ENSPTRG00000015789 N 0.817
NCBP2 Pteropus vampyrus ENSPVAG00000017273 N 0.803
Pigz Rattus norvegicus ENSRNOG00000001746 N 0.817
NCBP2 Sorex araneus ENSSARG00000014294 N 0.732
ENSSSCG00000011835 Sus scrofa ENSSSCG00000011835 N 0.817
ENSSSCG00000011840 Sus scrofa ENSSSCG00000011840 N 0.817
NCBP2L Sus scrofa ENSSSCG00000012562 N 0.732
ENSSTOG00000001584 Spermophilus tridecemlineatus ENSSTOG00000001584 N 0.817
NCBP2 Tupaia belangeri ENSTBEG00000015222 N 0.817
B5G279_TAEGU Taeniopygia guttata ENSTGUG00000007323 N 0.803
NCBP2 Taeniopygia guttata ENSTGUG00000008864 N 0.803
NCBP2 Tetraodon nigroviridis ENSTNIG00000006065 N 0.761
NCBP2 Takifugu rubripes ENSTRUG00000018355 N 0.761
NCBP2 Tursiops truncatus ENSTTRG00000013908 N 0.817
NCBP2 Vicugna pacos ENSVPAG00000010369 N 0.817
ncbp2 Xenopus tropicalis ENSXETG00000019384 N 0.789
estExt_fgenesh1_kg.C_1730002 Daphnia pulex estExt_fgenesh1_kg.C_1730002 N 0.775
estExt_fgenesh1_kg.C_sca_10_chr8_2_00014 Nectria haematococca estExt_fgenesh1_kg.C_sca_10_chr8_2_00014 N 0.746
estExt_Genewise1.C_10147 Cochliobolus heterostrophus C5 estExt_Genewise1.C_10147 N 0.732
estExt_Genewise1.C_5160046 Capitella teleta estExt_Genewise1.C_5160046 N 0.746
estExt_Genewise1.C_sca_180152 Lottia gigantea estExt_Genewise1.C_sca_180152 N 0.831
estExt_Genewise1Plus.C_150343 Trichoderma atroviride estExt_Genewise1Plus.C_150343 N 0.732
estExt_Genewise1Plus.C_40730 Myceliophthora thermophila estExt_Genewise1Plus.C_40730 N 0.746
estExt_Genewise1Plus.C_50921 Neurospora discreta estExt_Genewise1Plus.C_50921 N 0.732
estExt_gwp.C_920142 Nematostella vectensis estExt_gwp.C_920142 N 0.761
e_gw1.1.927.1 Trichoplax adhaerens e_gw1.1.927.1 N 0.732
e_gw1.10.746.1 Trichoderma virens e_gw1.10.746.1 N 0.761
e_gw1.17.191.1 Trichoderma reesei e_gw1.17.191.1 N 0.761
e_gw1.3.1174.1 Thielavia terrestris e_gw1.3.1174.1 N 0.746
ncbp-2 Caenorhabditis elegans F26A3.2 N 0.704
Cbp20 Drosophila melanogaster FBgn0022943 N 0.746
GA11577-RA Drosophila pseudoobscura FBgn0071628 N 0.746
GF16759 Drosophila ananassae FBgn0093780 N 0.761
GG22670 Drosophila erecta FBgn0114835 N 0.746
GH15101 Drosophila grimshawi FBgn0122576 N 0.761
GI23717 Drosophila mojavensis FBgn0146442 N 0.761
GL12592 Drosophila persimilis FBgn0150198 N 0.746
GM15280 Drosophila sechellia FBgn0170200 N 0.746
GD19204 Drosophila simulans FBgn0190709 N 0.746
GJ18756 Drosophila virilis FBgn0205908 N 0.732
GJ23276 Drosophila virilis FBgn0210378 N 0.761
GK11244 Drosophila willistoni FBgn0213255 N 0.761
GE25514 Drosophila yakuba FBgn0242580 N 0.746
fgenesh1_pg.C_scaffold_1000747 Cryphonectria parasitica fgenesh1_pg.C_scaffold_1000747 N 0.732
fgenesh1_pm.00772_#_82 Aspergillus carbonarius fgenesh1_pm.00772_#_82 N 0.718
fgeneshMC_pm.5_#_40 Mucor circinelloides fgeneshMC_pm.5_#_40 N 0.732
FGSG_05488 Fusarium graminearum FGSG_05488 N 0.718
FVEG_07036 Fusarium verticillioides FVEG_07036 N 0.746
GID1.0044779 Dictyostelium purpureum GID1.0044779 N 0.718
GLRG_00177 Colletotrichum graminicola GLRG_00177 N 0.732
Glyma12g33400.1 Glycine max Glyma12g33400.1 N 0.704
Glyma13g37030.1 Glycine max Glyma13g37030.1 N 0.718
GRMZM2G034804 Zea mays GRMZM2G034804 N 0.732
GSTUMT00010626001 Tuber melanosporum GSTUMT00010626001 N 0.746
GSVIVG00020599001 Vitis vinifera GSVIVG00020599001 N 0.704
gw.81.90.1 Branchiostoma floridae gw.81.90.1 N 0.789
gw.93.114.1 Branchiostoma floridae gw.93.114.1 N 0.789
gw1.29.143.1 Phycomyces blakesleeanus gw1.29.143.1 N 0.761
HCAG_07341 Histoplasma capsulatum HCAG_07341 N 0.732
LOAG_03270 Loa loa LOAG_03270 N 0.775
LOC_Os02g39890 Oryza sativa LOC_Os02g39890 N 0.704
MCYG_04468 Microsporum canis MCYG_04468 N 0.732
MDP0000315402 Malus x domestica MDP0000315402 N 0.704
MGG_06296 Magnaporthe oryzae MGG_06296 N 0.732
MGYG_02166 Microsporum gypseum MGYG_02166 N 0.732
Minc02990 Meloidogyne incognita Minc02990 N 0.732
Minc06129 Meloidogyne incognita Minc06129 N 0.732
nasonia_NCBI_hmm134534 Nasonia vitripennis nasonia_NCBI_hmm134534 N 0.746
nasonia_NCBI_hmm1532803 Nasonia vitripennis nasonia_NCBI_hmm1532803 N 0.803
NCU00210 Neurospora crassa NCU00210 N 0.732
P52299 Xenopus laevis P52299 N 0.761
PABG_07236 Paracoccidioides brasiliensis PABG_07236 N 0.732
Pa_7_2520 Podospora anserina Pa_7_2520 N 0.732
Pc13g04070 Penicillium chrysogenum Pc13g04070 N 0.732
PDK_20s1327431g003 Phoenix dactylifera PDK_20s1327431g003 N 0.704
PHUM535920 Pediculus humanus PHUM535920 N 0.803
PK11911.1 Cannabis sativa PK11911.1 N 0.704
PMAA_070830 Penicillium marneffei PMAA_070830 N 0.732
ppa010346m Prunus persica ppa010346m N 0.704
Ppa-ncbp-2 Pristionchus pacificus PPA17381 N 0.789
PredSwiss_ASS2010_2397.2 Pneumocystis carinii PredSwiss_ASS2010_2397.2 N 0.733
PredSwiss_CON682.3 Pneumocystis carinii PredSwiss_CON682.3 N 0.733
PTRG_00402 Pyrenophora tritici repentis PTRG_00402 N 0.732
SB04G025800 Sorghum bicolor Sb04g025800 N 0.732
SJAG_01064 Schizosaccharomyces japonicus SJAG_01064 N 0.732
Sjc_0008080 Schistosoma japonicum Sjc_0008080 N 0.732
SNOG_09598 Stagonospora nodorum SNOG_09598 N 0.732
SOCG_01831 Schizosaccharomyces octosporus SOCG_01831 N 0.718
SPOG_01217 Schizosaccharomyces cryophilus SPOG_01217 N 0.704
SPPG_00516 Spizellomyces punctatus SPPG_00516 N 0.761
SS1G_13629 Sclerotinia sclerotiorum SS1G_13629 N 0.746
TEQG_01953 Trichophyton equinum TEQG_01953 N 0.732
TERG_03424 Trichophyton rubrum TERG_03424 N 0.732
TESG_01120 Trichophyton tonsurans TESG_01120 N 0.718
VDAG_05874 Verticillium dahliae VDAG_05874 N 0.704
VDBG_06810 Verticillium albo atrum VDBG_06810 N 0.704
WUBG_16568 Wuchereria bancrofti WUBG_16568 N 0.775
XP_001187788.1 Strongylocentrotus purpuratus XP_001187788.1 N 0.732
XP_002160076.1 Hydra magnipapillata XP_002160076.1 N 0.803
XP_002166119.1 Hydra magnipapillata XP_002166119.1 N 0.803
XP_802051.1 Strongylocentrotus purpuratus XP_802051.1 N 0.732