PCHAS_144180 (Plasmodium chabaudi)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 PCHAS_144180 T47351_0.6 EuPathDB (2010-Sep-21)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PCHAS_144180 RRM 16 83

Links

Other RRM family RBPs
Other Plasmodium chabaudi RBPs

137 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
29842.m003612 Ricinus communis 29842.m003612 N 0.000
BGIOSIBCE016680 Oryza indica BGIOSIBCE016680 N 0.000
BGIOSIBSE038779 Oryza indica BGIOSIBSE038779 N 0.000
BRADI3G15180 Brachypodium distachyon BRADI3G15180 N 0.000
BRADI5G22410 Brachypodium distachyon BRADI5G22410 N 0.000
cassava36999.valid.m1 Manihot esculenta cassava36999.valid.m1 I 0.000
cassava37000.valid.m1 Manihot esculenta cassava37000.valid.m1 I 0.000
cassava37001.valid.m1 Manihot esculenta cassava37001.valid.m1 I 0.000
cassava37002.valid.m1 Manihot esculenta cassava37002.valid.m1 I 0.000
cassava37003.valid.m1 Manihot esculenta cassava37003.valid.m1 I 0.000
chr4.CM1334.150.nc Lotus japonicus chr4.CM1334.150.nc N 0.000
chr6.CM0139.780.nd Lotus japonicus chr6.CM0139.780.nd I 0.000
Cucsa.085240 Cucumis sativus Cucsa.085240 N 0.000
Cucsa.085910 Cucumis sativus Cucsa.085910 I 0.000
Cucsa.085920 Cucumis sativus Cucsa.085920 I 0.000
Glyma07g38940.1 Glycine max Glyma07g38940.1 I 0.000
Glyma13g27570.1 Glycine max Glyma13g27570.1 I 0.000
Glyma15g11380.1 Glycine max Glyma15g11380.1 I 0.000
Glyma17g01800.1 Glycine max Glyma17g01800.1 I 0.000
GRMZM2G012628 Zea mays GRMZM2G012628 N 0.000
GRMZM2G058098 Zea mays GRMZM2G058098 N 0.000
GRMZM2G426591 Zea mays GRMZM2G426591 N 0.000
LOC_Os04g53440 Oryza sativa LOC_Os04g53440 N 0.000
LOC_Os08g09100 Oryza sativa LOC_Os08g09100 N 0.000
MDP0000223369 Malus x domestica MDP0000223369 N 0.000
MDP0000224315 Malus x domestica MDP0000224315 N 0.000
MDP0000294628 Malus x domestica MDP0000294628 I 0.000
MDP0000614064 Malus x domestica MDP0000614064 N 0.000
Medtr8g146650 Medicago truncatula Medtr8g146650 N 0.000
mgf010468m Mimulus guttatus mgf010468m I 0.000
mgf014417m Mimulus guttatus mgf014417m N 0.000
PDK_20s1343381g001 Phoenix dactylifera PDK_20s1343381g001 N 0.000
PK10695.1 Cannabis sativa PK10695.1 I 0.000
PK15181.1 Cannabis sativa PK15181.1 N 0.000
B9H1C9_POPTR Populus trichocarpa POPTR_0004s01690 N 0.000
POPTR_0011s14150 Populus trichocarpa POPTR_0011s14150 N 0.000
ppa006577m Prunus persica ppa006577m I 0.000
ppa006617m Prunus persica ppa006617m N 0.000
SB06G029180 Sorghum bicolor Sb06g029180 N 0.000
Sb07g005360 Sorghum bicolor Sb07g005360 N 0.000