MDP0000223369 (Malus x domestica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 MDP0000223369 T57454_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
MDP0000223369 RRM 269 339
MDP0000223369 RRM 362 433
MDP0000223369 RRM 471 535

Links

Other RRM family RBPs
Other Malus x domestica RBPs

34 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
MDP0000614064 Malus x domestica MDP0000614064 N 0.986
ppa006577m Prunus persica ppa006577m I 0.918
cassava37000.valid.m1 Manihot esculenta cassava37000.valid.m1 I 0.822
cassava37001.valid.m1 Manihot esculenta cassava37001.valid.m1 I 0.822
cassava37003.valid.m1 Manihot esculenta cassava37003.valid.m1 I 0.822
cassava36999.valid.m1 Manihot esculenta cassava36999.valid.m1 I 0.822
cassava37002.valid.m1 Manihot esculenta cassava37002.valid.m1 I 0.822
cassava35906.valid.m1 Manihot esculenta cassava35906.valid.m1 I 0.808
A9PGI8_POPTR Populus trichocarpa POPTR_0001s45000 I 0.803
29666.m001436 Ricinus communis 29666.m001436 I 0.784
mgf010468m Mimulus guttatus mgf010468m I 0.779
XM_002864318.1 Arabidopsis lyrata fgenesh2_kg.8__1388__AT5G54900.1 N 0.750
ATRBP45C Arabidopsis thaliana AT4G27000-TAIR-G N 0.750
mgf014417m Mimulus guttatus mgf014417m N 0.750
ATRBP45A Arabidopsis thaliana AT5G54900-TAIR-G N 0.750
Glyma13g27570.1 Glycine max Glyma13g27570.1 I 0.745
Glyma15g11380.1 Glycine max Glyma15g11380.1 I 0.740
XM_002867483.1 Arabidopsis lyrata scaffold_701590.1 I 0.740
29842.m003612 Ricinus communis 29842.m003612 N 0.736
Glyma17g01800.1 Glycine max Glyma17g01800.1 I 0.731
chr6.CM0139.780.nd Lotus japonicus chr6.CM0139.780.nd I 0.726
Cucsa.085910 Cucumis sativus Cucsa.085910 I 0.726
chr4.CM1334.150.nc Lotus japonicus chr4.CM1334.150.nc N 0.726
Glyma07g38940.1 Glycine max Glyma07g38940.1 I 0.726
PK10695.1 Cannabis sativa PK10695.1 I 0.721
Cucsa.085920 Cucumis sativus Cucsa.085920 I 0.721
BGIOSIBSE038779 Oryza indica BGIOSIBSE038779 N 0.721
B9H1C9_POPTR Populus trichocarpa POPTR_0004s01690 N 0.721
LOC_Os08g09100 Oryza sativa LOC_Os08g09100 N 0.716
MDP0000294628 Malus x domestica MDP0000294628 I 0.712
Medtr8g146650 Medicago truncatula Medtr8g146650 N 0.707
GRMZM2G426591 Zea mays GRMZM2G426591 N 0.707
ppa006617m Prunus persica ppa006617m N 0.707
GSVIVG00031780001 Vitis vinifera GSVIVG00031780001 I 0.702