XR_010472.1 (Macaca mulatta)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSMMUG00000012991 T38903_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPA1
M312_0.6 		Homo sapiens Sequence logo not available UAGGGW RIP-chip
Cook et al.(2011)
560_17925491 		0.907
HNRNPA1
M271_0.6 		Homo sapiens UAGGGW SELEX
Cook et al.(2011)
23_7510636 		0.907
HNRNPA1
M022_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00022 		0.907
HNRNPA1L2
M023_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00023 		0.886
HNRNPA2B1
M024_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00024 		0.743
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMMUP00000000703 RRM 16 81
ENSMMUP00000000703 RRM 105 174
ENSMMUP00000002349 RRM 16 81
ENSMMUP00000002349 RRM 105 174

Links

Other RRM family RBPs
Other Macaca mulatta RBPs

248 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
HNRNPA1L2 Homo sapiens ENSG00000139675 D 0.852
HNRNPA1 Homo sapiens ENSG00000135486 D 0.873
ENSMMUG00000022448 Macaca mulatta ENSMMUG00000022448 I 0.793
LOC710473 Macaca mulatta ENSMMUG00000029402 I 0.866
ROA1_MACMU Macaca mulatta ENSMMUG00000031613 I 0.852
XM_001106745.1 Macaca mulatta ENSMMUG00000031809 I 0.843
ENSMODG00000006291 Monodelphis domestica ENSMODG00000006291 I 0.819
ENSMUSG00000021927 Mus musculus ENSMUSG00000021927 I 0.845
Hnrnpa1 Mus musculus ENSMUSG00000046434 I 0.873
ENSOCUG00000010985 Oryctolagus cuniculus ENSOCUG00000010985 I 0.859
ENSOCUG00000013350 Oryctolagus cuniculus ENSOCUG00000013350 I 0.873
ENSOCUG00000021006 Oryctolagus cuniculus ENSOCUG00000021006 I 0.845
ENSOCUG00000021007 Oryctolagus cuniculus ENSOCUG00000021007 I 0.859
ENSOCUG00000022568 Oryctolagus cuniculus ENSOCUG00000022568 I 0.866
ENSOCUG00000022627 Oryctolagus cuniculus ENSOCUG00000022627 I 0.817
ENSOCUG00000022668 Oryctolagus cuniculus ENSOCUG00000022668 I 0.852
ENSOCUG00000023322 Oryctolagus cuniculus ENSOCUG00000023322 I 0.859
HNRNPA1 Gorilla gorilla ENSGGOG00000003040 I 0.873
ENSGGOG00000025381 Gorilla gorilla ENSGGOG00000025381 I 0.859
ENSLAFG00000026657 Loxodonta africana ENSLAFG00000026657 I 0.845
ENSLAFG00000029587 Loxodonta africana ENSLAFG00000029587 I 0.866
ENSLAFG00000030769 Loxodonta africana ENSLAFG00000030769 I 0.838
ENSMGAG00000007630 Meleagris gallopavo ENSMGAG00000007630 I 0.832
ENSMICG00000009289 Microcebus murinus ENSMICG00000009289 I 0.835
ENSMLUG00000000648 Myotis lucifugus ENSMLUG00000000648 I 0.873
ENSMLUG00000000788 Myotis lucifugus ENSMLUG00000000788 I 0.850
ENSMLUG00000003232 Myotis lucifugus ENSMLUG00000003232 I 0.859
ENSMMUG00000004528 Macaca mulatta ENSMMUG00000004528 I 0.741
LOC710473 Macaca mulatta ENSMMUG00000007887 I 0.866
LOC710473 Macaca mulatta ENSMMUG00000007928 I 0.859
ENSMMUG00000008337 Macaca mulatta ENSMMUG00000008337 I 0.769
XR_011984.1 Macaca mulatta ENSMMUG00000011640 I 0.794
LOC710473 Macaca mulatta ENSMMUG00000012989 I 0.873
ENSOCUG00000023444 Oryctolagus cuniculus ENSOCUG00000023444 I 0.866
ENSOCUG00000023674 Oryctolagus cuniculus ENSOCUG00000023674 I 0.873
ENSOCUG00000028124 Oryctolagus cuniculus ENSOCUG00000028124 I 0.873
ENSSSCG00000000288 Sus scrofa ENSSSCG00000000288 I 0.873
ENSTBEG00000008238 Tupaia belangeri ENSTBEG00000008238 I 0.873
ENSTBEG00000012511 Tupaia belangeri ENSTBEG00000012511 I 0.817
ENSTBEG00000016272 Tupaia belangeri ENSTBEG00000016272 I 0.838
ENSTTRG00000004505 Tursiops truncatus ENSTTRG00000004505 I 0.873
hnrnpa1 Xenopus tropicalis ENSXETG00000021277 I 0.810
Ame_R011792 Ailuropoda melanoleuca Ame_R011792 I 0.873
AAA49741 Xenopus laevis AAA49741 I 0.789
AAA49742 Xenopus laevis AAA49742 I 0.789
AAH45260 Xenopus laevis AAH45260 I 0.803
AAH72090 Xenopus laevis AAH72090 I 0.803
CBF67555 Xenopus laevis CBF67555 I 0.789
CBF67672 Xenopus laevis CBF67672 I 0.803
CBU92428 Xenopus laevis CBU92428 I 0.789
CBU92546 Xenopus laevis CBU92546 I 0.803
ENSSARG00000008946 Sorex araneus ENSSARG00000008946 I 0.789
ENSRNOG00000039436 Rattus norvegicus ENSRNOG00000039436 I 0.838
Hnrnpa1 Rattus norvegicus ENSRNOG00000036839 I 0.873
ENSOGAG00000009945 Otolemur garnettii ENSOGAG00000009945 I 0.852
ENSOGAG00000017179 Otolemur garnettii ENSOGAG00000017179 I 0.736
ENSOPRG00000006107 Ochotona princeps ENSOPRG00000006107 I 0.866
ENSPPYG00000003855 Pongo pygmaeus ENSPPYG00000003855 I 0.729
ENSPPYG00000017853 Pongo pygmaeus ENSPPYG00000017853 I 0.866
ROA1_PANTR Pan troglodytes ENSPTRG00000005035 I 0.873
ROA1_PANTR Pan troglodytes ENSPTRG00000028756 I 0.873
ROA1_PANTR Pan troglodytes ENSPTRG00000031363 I 0.873
HNRNPA1L2 Pan troglodytes ENSPTRG00000032520 I 0.873
ENSPVAG00000000322 Pteropus vampyrus ENSPVAG00000000322 I 0.873
ENSRNOG00000005951 Rattus norvegicus ENSRNOG00000005951 I 0.817
D4A2D2_RAT Rattus norvegicus ENSRNOG00000021986 I 0.838
D4AD23_RAT Rattus norvegicus ENSRNOG00000025891 I 0.824
D4A491_RAT Rattus norvegicus ENSRNOG00000029531 I 0.838
ENSRNOG00000033182 Rattus norvegicus ENSRNOG00000033182 I 0.831
P17130 Xenopus laevis P17130 I 0.789
ENSG00000215492 Homo sapiens ENSG00000215492 I 0.873
ENSACAG00000007169 Anolis carolinensis ENSACAG00000007169 I 0.859
ENSCAFG00000006784 Canis familiaris ENSCAFG00000006784 I 0.831
ENSCAFG00000007879 Canis familiaris ENSCAFG00000007879 I 0.851
ENSCAFG00000007918 Canis familiaris ENSCAFG00000007918 I 0.738
ENSCAFG00000008379 Canis familiaris ENSCAFG00000008379 I 0.736
ENSCAFG00000009412 Canis familiaris ENSCAFG00000009412 I 0.769
ENSCAFG00000009606 Canis familiaris ENSCAFG00000009606 I 0.703
ENSCAFG00000010153 Canis familiaris ENSCAFG00000010153 I 0.859
ENSCAFG00000011035 Canis familiaris ENSCAFG00000011035 I 0.864
ENSCAFG00000013303 Canis familiaris ENSCAFG00000013303 I 0.743
ENSCAFG00000014691 Canis familiaris ENSCAFG00000014691 I 0.778
ENSCAFG00000015319 Canis familiaris ENSCAFG00000015319 I 0.843
XP_848548.1 Canis familiaris ENSCAFG00000016313 I 0.789
ENSCAFG00000017316 Canis familiaris ENSCAFG00000017316 I 0.767
ENSCAFG00000017494 Canis familiaris ENSCAFG00000017494 I 0.750
ENSCAFG00000018186 Canis familiaris ENSCAFG00000018186 I 0.857
ENSCAFG00000006663 Canis familiaris ENSCAFG00000006663 I 0.726
XP_541811.1 Canis familiaris ENSCAFG00000006586 I 0.803
ROA1_BOVIN Bos taurus ENSBTAG00000001553 I 0.873
LOC785445 Bos taurus ENSBTAG00000025621 I 0.831
XM_844664.1 Canis familiaris ENSCAFG00000000687 I 0.767
ENSCAFG00000000746 Canis familiaris ENSCAFG00000000746 I 0.714
ENSCAFG00000001973 Canis familiaris ENSCAFG00000001973 I 0.855
ENSCAFG00000002059 Canis familiaris ENSCAFG00000002059 I 0.796
XM_543834.2 Canis familiaris ENSCAFG00000002157 I 0.829
ENSCAFG00000003418 Canis familiaris ENSCAFG00000003418 I 0.726
ENSCAFG00000003921 Canis familiaris ENSCAFG00000003921 I 0.701
ENSCAFG00000004202 Canis familiaris ENSCAFG00000004202 I 0.857
XM_854536.1 Canis familiaris ENSCAFG00000005046 I 0.831
ENSCAFG00000005308 Canis familiaris ENSCAFG00000005308 I 0.858
ENSCAFG00000006036 Canis familiaris ENSCAFG00000006036 I 0.729
XM_855847.1 Canis familiaris ENSCAFG00000006327 I 0.803
XM_534786.2 Canis familiaris ENSCAFG00000006580 I 0.873
ENSCAFG00000018456 Canis familiaris ENSCAFG00000018456 I 0.719
ENSCAFG00000019104 Canis familiaris ENSCAFG00000019104 I 0.843
ENSCAFG00000019118 Canis familiaris ENSCAFG00000019118 I 0.871
ENSCJAG00000019479 Callithrix jacchus ENSCJAG00000019479 I 0.873
ENSCJAG00000020672 Callithrix jacchus ENSCJAG00000020672 I 0.803
LOC100410389 Callithrix jacchus ENSCJAG00000023392 I 0.845
ENSCJAG00000031552 Callithrix jacchus ENSCJAG00000031552 I 0.845
ENSCJAG00000032417 Callithrix jacchus ENSCJAG00000032417 I 0.810
ENSCJAG00000033856 Callithrix jacchus ENSCJAG00000033856 I 0.873
ENSCJAG00000035202 Callithrix jacchus ENSCJAG00000035202 I 0.810
ENSCPOG00000021077 Cavia porcellus ENSCPOG00000021077 I 0.845
ENSDNOG00000009228 Dasypus novemcinctus ENSDNOG00000009228 I 0.873
Hnrnpa1 Dipodomys ordii ENSDORG00000010628 I 0.789
LOC100054206 Equus caballus ENSECAG00000006699 I 0.864
Q6DTK6_HORSE Equus caballus ENSECAG00000008676 I 0.873
ENSEEUG00000000494 Erinaceus europaeus ENSEEUG00000000494 I 0.845
ENSEEUG00000006130 Erinaceus europaeus ENSEEUG00000006130 I 0.859
ENSFCAG00000010150 Felis catus ENSFCAG00000010150 I 0.873
ENSCJAG00000016375 Callithrix jacchus ENSCJAG00000016375 I 0.824
LOC100397230 Callithrix jacchus ENSCJAG00000014791 I 0.810
ENSCAFG00000020238 Canis familiaris ENSCAFG00000020238 I 0.862
ENSCAFG00000023056 Canis familiaris ENSCAFG00000023056 I 0.727
XM_852631.1 Canis familiaris ENSCAFG00000023680 I 0.838
ENSCAFG00000024636 Canis familiaris ENSCAFG00000024636 I 0.000
ENSCAFG00000024951 Canis familiaris ENSCAFG00000024951 I 0.823
ENSCAFG00000025274 Canis familiaris ENSCAFG00000025274 I 0.803
ENSCJAG00000000095 Callithrix jacchus ENSCJAG00000000095 I 0.803
ENSCJAG00000001353 Callithrix jacchus ENSCJAG00000001353 I 0.857
LOC100409067 Callithrix jacchus ENSCJAG00000003245 I 0.859
LOC100397230 Callithrix jacchus ENSCJAG00000004031 I 0.866
ENSCJAG00000004902 Callithrix jacchus ENSCJAG00000004902 I 0.831
ENSCJAG00000005326 Callithrix jacchus ENSCJAG00000005326 I 0.762
LOC100413454 Callithrix jacchus ENSCJAG00000009030 I 0.859
ENSCJAG00000009723 Callithrix jacchus ENSCJAG00000009723 I 0.831
ENSCJAG00000010169 Callithrix jacchus ENSCJAG00000010169 I 0.817
LOC100397230 Callithrix jacchus ENSCJAG00000018864 I 0.873