NCL (Ornithorhynchus anatinus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSOANG00000008732 T39507_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
NCL
M245_0.6 		Homo sapiens CCGAAAKCCCGAAGYAGG SELEX
Cook et al.(2011)
1004_8676391 		0.808
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSOANP00000013915 RRM 228 296
ENSOANP00000013915 RRM 314 380
ENSOANP00000013915 RRM 409 475
ENSOANP00000013915 RRM 497 564
ENSOANP00000013916 RRM 231 299
ENSOANP00000013916 RRM 317 383
ENSOANP00000013916 RRM 412 478
ENSOANP00000013916 RRM 497 564

Links

Other RRM family RBPs
Other Ornithorhynchus anatinus RBPs

34 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GD21193 Drosophila simulans FBgn0192644 N 0.000
GE23579 Drosophila yakuba FBgn0240752 N 0.000
GM17825 Drosophila sechellia FBgn0172732 N 0.000
Nup358 Drosophila melanogaster FBgn0039302 N 0.000