Pcbp1 (Mus musculus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSMUSG00000051695 T19140_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Pcbp1
M207_0.6		 Mus musculus CYUUCC RNAcompete
Ray et al.(2013)
RNCMPT00239 		(Direct)

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
PCBP1
M177_0.6 		Homo sapiens CCWWHCC RNAcompete
Ray et al.(2013)
RNCMPT00186 		1.000
PCBP2
M043_0.6 		Homo sapiens CCYYCCH RNAcompete
Ray et al.(2013)
RNCMPT00044 		0.936
pcbp2
M211_0.6 		Danio rerio WWUCCC RNAcompete
Ray et al.(2013)
RNCMPT00246 		0.910
Pcbp3
M188_0.6 		Mus musculus UUUYCC RNAcompete
Ray et al.(2013)
RNCMPT00215 		0.862
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M207_0.6 KH 15 75
M207_0.6 KH 99 162
M207_0.6 KH 281 343

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMUSP00000054863 KH 15 75
ENSMUSP00000054863 KH 99 162
ENSMUSP00000054863 KH 281 343

Links

Other KH family RBPs
Other Mus musculus RBPs

126 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R002707 Ailuropoda melanoleuca Ame_R002707 I 1.000
Ame_R007066 Ailuropoda melanoleuca Ame_R007066 N 0.000
ENSACAG00000000783 Anolis carolinensis ENSACAG00000000783 I 0.936
PCBP4 Anolis carolinensis ENSACAG00000011701 I 0.711
ENSACAG00000009819 Anolis carolinensis ENSACAG00000009819 I 0.846
PCBP3 Anolis carolinensis ENSACAG00000004607 I 0.862
PCBP1_BOVIN Bos taurus ENSBTAG00000008985 I 1.000
Q17QV0_BOVIN Bos taurus ENSBTAG00000030775 I 0.851
PCBP4_BOVIN Bos taurus ENSBTAG00000018622 I 0.705
Q3SYT9_BOVIN Bos taurus ENSBTAG00000020757 I 0.936
LOC100408015 Callithrix jacchus ENSCJAG00000001903 I 0.862
ENSCJAG00000034075 Callithrix jacchus ENSCJAG00000034075 I 0.931
LOC100392590 Callithrix jacchus ENSCJAG00000018590 I 0.926
A6MK33_CALJA Callithrix jacchus ENSCJAG00000005783 I 0.705
PCBP3 Canis familiaris ENSCAFG00000011907 N 0.000
PCBP4 Canis familiaris ENSCAFG00000010019 I 0.705
PCBP2 Canis familiaris ENSCAFG00000006821 I 0.936
PCBP1 Cavia porcellus ENSCPOG00000013511 I 1.000
PCBP4 Cavia porcellus ENSCPOG00000014617 I 0.700
PCBP3 Cavia porcellus ENSCPOG00000003648 I 0.862
ENSCPOG00000000967 Cavia porcellus ENSCPOG00000000967 I 0.936
pcbp2 Danio rerio ENSDARG00000013184 D 0.910
zgc:110045 Danio rerio ENSDARG00000057141 N 0.000
pcbp3 Danio rerio ENSDARG00000054378 I 0.766
PCBP4 Danio rerio ENSDARG00000024276 N 0.000
PCBP2 Dasypus novemcinctus ENSDNOG00000008688 I 0.936
Pcbp4 Dipodomys ordii ENSDORG00000000573 N 0.000
Pcbp3 Dipodomys ordii ENSDORG00000003640 N 0.000
PCBP4 Echinops telfairi ENSETEG00000001778 N 0.000
LOC100060660 Equus caballus ENSECAG00000024218 I 0.705
PCBP2 Equus caballus ENSECAG00000022389 I 0.936
LOC100050101 Equus caballus ENSECAG00000012413 I 0.862
LOC100050579 Equus caballus ENSECAG00000002544 I 1.000
PCBP2 Erinaceus europaeus ENSEEUG00000001077 N 0.000
PCBP4 Felis catus ENSFCAG00000009148 N 0.000
PCBP3 Gallus gallus ENSGALG00000004394 I 0.835
PCBP3 Gallus gallus ENSGALG00000013155 I 0.851
LOC426023 Gallus gallus ENSGALG00000013313 N 0.000
PCBP4 Gasterosteus aculeatus ENSGACG00000002664 I 0.741
PCBP3 Gasterosteus aculeatus ENSGACG00000002266 I 0.851
ENSGACG00000006681 Gasterosteus aculeatus ENSGACG00000006681 I 0.888
PCBP3 Gasterosteus aculeatus ENSGACG00000014955 I 0.851
ENSGACG00000003044 Gasterosteus aculeatus ENSGACG00000003044 I 0.737
PCBP4 Gorilla gorilla ENSGGOG00000012474 I 0.705
PCBP1 Gorilla gorilla ENSGGOG00000028130 I 1.000
PCBP3 Gorilla gorilla ENSGGOG00000003683 I 0.862
PCBP2 Gorilla gorilla ENSGGOG00000012613 I 0.936
PCBP4 Homo sapiens ENSG00000090097 I 0.705
PCBP2 Homo sapiens ENSG00000197111 D 0.936
PCBP3 Homo sapiens ENSG00000183570 I 0.862
PCBP1 Homo sapiens ENSG00000169564 D 1.000
ENSLAFG00000013187 Loxodonta africana ENSLAFG00000013187 I 0.936
PCBP4 Loxodonta africana ENSLAFG00000010732 N 0.000
PCBP4 Macaca mulatta ENSMMUG00000022205 I 0.705
PCBP2 Macaca mulatta ENSMMUG00000006608 I 0.936
PCBP3 Macaca mulatta ENSMMUG00000003825 I 0.862
PCBP4 Macropus eugenii ENSMEUG00000006917 N 0.000
PCBP3 Macropus eugenii ENSMEUG00000012960 I 0.819
ENSMGAG00000005091 Meleagris gallopavo ENSMGAG00000005091 N 0.000
ENSMGAG00000006794 Meleagris gallopavo ENSMGAG00000006794 I 0.803
ENSMGAG00000003895 Meleagris gallopavo ENSMGAG00000003895 N 0.000
PCBP3 Meleagris gallopavo ENSMGAG00000001883 I 0.862
PCBP2 Microcebus murinus ENSMICG00000011651 I 0.936
PCBP4 Microcebus murinus ENSMICG00000002686 N 0.000
PCBP4 Monodelphis domestica ENSMODG00000011790 I 0.000
ENSMODG00000000280 Monodelphis domestica ENSMODG00000000280 I 0.936
Pcbp3 Mus musculus ENSMUSG00000001120 D 0.862
Pcbp4 Mus musculus ENSMUSG00000023495 I 0.705
Pcbp2 Mus musculus ENSMUSG00000056851 I 0.936
PCBP1 Myotis lucifugus ENSMLUG00000014173 I 1.000
PCBP4 Ochotona princeps ENSOPRG00000008763 N 0.000
PCBP2 Ochotona princeps ENSOPRG00000004680 I 0.936
PCBP3 Ornithorhynchus anatinus ENSOANG00000006265 N 0.000
PCBP4 Ornithorhynchus anatinus ENSOANG00000014110 I 0.716
PCBP4 Oryctolagus cuniculus ENSOCUG00000025336 I 0.705
ENSOCUG00000022490 Oryctolagus cuniculus ENSOCUG00000022490 I 0.936
PCBP1_RABIT Oryctolagus cuniculus ENSOCUG00000003634 I 1.000
PCBP3 Oryctolagus cuniculus ENSOCUG00000002696 I 0.862
ENSORLG00000014385 Oryzias latipes ENSORLG00000014385 I 0.782
ENSORLG00000012872 Oryzias latipes ENSORLG00000012872 I 0.894
ENSORLG00000005176 Oryzias latipes ENSORLG00000005176 I 0.899
PCBP3 Oryzias latipes ENSORLG00000000059 I 0.815
PCBP4 Oryzias latipes ENSORLG00000003061 I 0.000
PCBP4 Pan troglodytes ENSPTRG00000014983 I 0.705
PCBP3 Pan troglodytes ENSPTRG00000014010 I 0.862
PCBP1 Pan troglodytes ENSPTRG00000012025 I 1.000
PCBP2 Pan troglodytes ENSPTRG00000005018 I 0.936
ENSPPYG00000013822 Pongo pygmaeus ENSPPYG00000013822 I 0.705
ENSPPYG00000012328 Pongo pygmaeus ENSPPYG00000012328 I 1.000
ENSPPYG00000011525 Pongo pygmaeus ENSPPYG00000011525 N 0.000
ENSPPYG00000004581 Pongo pygmaeus ENSPPYG00000004581 I 0.936
PCBP4 Procavia capensis ENSPCAG00000009515 N 0.000
PCBP2 Procavia capensis ENSPCAG00000005154 I 0.936
PCBP2 Pteropus vampyrus ENSPVAG00000012284 I 0.936
PCBP4 Pteropus vampyrus ENSPVAG00000012474 N 0.000
D3ZWQ9_RAT Rattus norvegicus ENSRNOG00000038946 N 0.000
Pcbp1 Rattus norvegicus ENSRNOG00000017708 I 1.000
Pcbp3 Rattus norvegicus ENSRNOG00000001245 I 0.862
Pcbp4 Rattus norvegicus ENSRNOG00000012406 I 0.705
PCBP4 Spermophilus tridecemlineatus ENSSTOG00000002573 N 0.000
PCBP2 Sus scrofa ENSSSCG00000000274 I 0.936
PCBP4 Taeniopygia guttata ENSTGUG00000006393 I 0.700
PCBP3-2 Taeniopygia guttata ENSTGUG00000008158 I 0.851
PCBP3 Takifugu rubripes ENSTRUG00000013604 I 0.851
ENSTRUG00000011419 Takifugu rubripes ENSTRUG00000011419 I 0.878
ENSTRUG00000009361 Takifugu rubripes ENSTRUG00000009361 I 0.899
PCBP4 Takifugu rubripes ENSTRUG00000007426 I 0.746
PCBP3 Takifugu rubripes ENSTRUG00000006280 I 0.851
ENSTRUG00000017789 Takifugu rubripes ENSTRUG00000017789 I 0.726
PCBP4 Tetraodon nigroviridis ENSTNIG00000017887 I 0.741
PCBP1 Tetraodon nigroviridis ENSTNIG00000012585 I 0.894
PCBP3 Tetraodon nigroviridis ENSTNIG00000010615 I 0.851
ENSTNIG00000003546 Tetraodon nigroviridis ENSTNIG00000003546 N 0.000
PCBP2 Tursiops truncatus ENSTTRG00000017174 I 0.936
PCBP3 Tursiops truncatus ENSTTRG00000015075 I 0.862
PCBP4 Tursiops truncatus ENSTTRG00000001443 N 0.000
PCBP2 Vicugna pacos ENSVPAG00000000406 N 0.000
CAB50743 Xenopus laevis CAB50743 I 0.926
AAI33216 Xenopus laevis AAI33216 N 0.000
AAH84195 Xenopus laevis AAH84195 I 0.926
AAH74333 Xenopus laevis AAH74333 N 0.000
AAH41241 Xenopus laevis AAH41241 I 0.926
CAD29864 Xenopus laevis CAD29864 I 0.926
pcbp3 Xenopus tropicalis ENSXETG00000012658 I 0.926
pcbp1 Xenopus tropicalis ENSXETG00000011483 N 0.000