BRADI1G21480 (Brachypodium distachyon)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 BRADI1G21480 T33127_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
BRADI1G21480.1 RRM 64 130
BRADI1G21480.1 RRM 149 220
BRADI1G21480.1 RRM 271 337

Links

Other RRM family RBPs
Other Brachypodium distachyon RBPs

60 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC_Os07g42380 Oryza sativa LOC_Os07g42380 N 0.898
BGIOSIBCE025600 Oryza indica BGIOSIBCE025600 N 0.845
cassava31596.valid.m1 Manihot esculenta cassava31596.valid.m1 I 0.792
cassava34810.m1 Manihot esculenta cassava34810.m1 I 0.792
cassava31598.valid.m1 Manihot esculenta cassava31598.valid.m1 I 0.792
cassava31597.valid.m1 Manihot esculenta cassava31597.valid.m1 I 0.792
GSVIVG00015040001 Vitis vinifera GSVIVG00015040001 I 0.791
GRMZM2G090908 Zea mays GRMZM2G090908 N 0.786
cassava2732.m1 Manihot esculenta cassava2732.m1 I 0.783
cassava2733.m1 Manihot esculenta cassava2733.m1 I 0.783
cassava2731.m1 Manihot esculenta cassava2731.m1 I 0.783
cassava127.valid.m1 Manihot esculenta cassava127.valid.m1 I 0.783
cassava128.valid.m1 Manihot esculenta cassava128.valid.m1 I 0.783
cassava2734.m1 Manihot esculenta cassava2734.m1 I 0.783
cassava2735.m1 Manihot esculenta cassava2735.m1 I 0.783
PK20770.1 Cannabis sativa PK20770.1 I 0.783
cassava129.valid.m1 Manihot esculenta cassava129.valid.m1 I 0.783
29727.m000492 Ricinus communis 29727.m000492 I 0.778
Glyma07g04640.1 Glycine max Glyma07g04640.1 I 0.773
Medtr8g025650 Medicago truncatula Medtr8g025650 I 0.768
Cucsa.360070 Cucumis sativus Cucsa.360070 N 0.768
ppa006170m Prunus persica ppa006170m I 0.768
Sb05g024850 Sorghum bicolor Sb05g024850 N 0.767
BRADI4G13327 Brachypodium distachyon BRADI4G13327 N 0.767
MDP0000871411 Malus x domestica MDP0000871411 I 0.767
PDK_20s1310721g001 Phoenix dactylifera PDK_20s1310721g001 N 0.767
Glyma16g01230.1 Glycine max Glyma16g01230.1 I 0.763
GSVIVG00016720001 Vitis vinifera GSVIVG00016720001 I 0.763
B9GVQ6_POPTR Populus trichocarpa POPTR_0003s06680 I 0.763
cassava19001.valid.m1 Manihot esculenta cassava19001.valid.m1 I 0.762
B9N7F5_POPTR Populus trichocarpa POPTR_0001s16630 I 0.758
ppa006419m Prunus persica ppa006419m I 0.757
Cucsa.149440 Cucumis sativus Cucsa.149440 I 0.754
Glyma13g17200.1 Glycine max Glyma13g17200.1 I 0.752
POPTR_0006s14150 Populus trichocarpa POPTR_0006s14150 I 0.752
29739.m003726 Ricinus communis 29739.m003726 I 0.752
Cucsa.117430 Cucumis sativus Cucsa.117430 I 0.752
LOC_Os11g40510 Oryza sativa LOC_Os11g40510 N 0.748
BGIOSIBCE035181 Oryza indica BGIOSIBCE035181 N 0.748
mgf015309m Mimulus guttatus mgf015309m N 0.736
mgf001763m Mimulus guttatus mgf001763m I 0.733
ppa006248m Prunus persica ppa006248m I 0.731
XM_002892901.1 Arabidopsis lyrata scaffold_101937.1 I 0.729
mgf004534m Mimulus guttatus mgf004534m N 0.729
XM_002882822.1 Arabidopsis lyrata fgenesh2_kg.3__1524__AT3G14100.1 N 0.729
AT3G14100 Arabidopsis thaliana AT3G14100-TAIR-G N 0.729
LOC_Os08g40880 Oryza sativa LOC_Os08g40880 N 0.728
UBP1B Arabidopsis thaliana AT1G17370-TAIR-G I 0.725
PK22818.1 Cannabis sativa PK22818.1 I 0.723
BRADI3G40460 Brachypodium distachyon BRADI3G40460 I 0.723
SB07G027050 Sorghum bicolor Sb07g027050 N 0.723
cassava31599.valid.m1 Manihot esculenta cassava31599.valid.m1 N 0.720
GRMZM2G166355 Zea mays GRMZM2G166355 N 0.718
GSVIVG00035575001 Vitis vinifera GSVIVG00035575001 I 0.716
Glyma17g05530.1 Glycine max Glyma17g05530.1 I 0.716
MDP0000149711 Malus x domestica MDP0000149711 N 0.715
28226.m000878 Ricinus communis 28226.m000878 I 0.712
XM_002894431.1 Arabidopsis lyrata fgenesh2_kg.1__4492__AT1G54080.1 N 0.705
Medtr3g133100 Medicago truncatula Medtr3g133100 I 0.702
chr1.LjT36G06.30.nc Lotus japonicus chr1.LjT36G06.30.nc I 0.702