CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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SPPG_07834
(
Spizellomyces punctatus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
SPPG_07834
T30870_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
SPPG_07834T0
RRM
132
202
VFLGRIPHGFYEKEMKAYFSQFGDVKRLRLSRNKKTGKSKHYAFIEFSSEDTAKIVAETMDNYLLFNHLLR
Links
Other
RRM
family RBPs
Other
Spizellomyces punctatus
RBPs
46 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AAA49741
Xenopus laevis
AAA49741
I
0.000
AAA49742
Xenopus laevis
AAA49742
I
0.000
AAA49948
Xenopus laevis
AAA49948
I
0.000
AAA49949
Xenopus laevis
AAA49949
I
0.000
AAA49950
Xenopus laevis
AAA49950
I
0.000
AAB59951
Xenopus laevis
AAB59951
I
0.000
AAH43750
Xenopus laevis
AAH43750
I
0.000
AAH45260
Xenopus laevis
AAH45260
I
0.000
AAH46692
Xenopus laevis
AAH46692
I
0.000
AAH72090
Xenopus laevis
AAH72090
I
0.000
AAI06633
Xenopus laevis
AAI06633
I
0.000
AAI69881
Xenopus laevis
AAI69881
I
0.000
Ame_R000626
Ailuropoda melanoleuca
Ame_R000626
I
0.000
Ame_R011792
Ailuropoda melanoleuca
Ame_R011792
I
0.000
CBF67555
Xenopus laevis
CBF67555
I
0.000
CBF67577
Xenopus laevis
CBF67577
I
0.000
CBF67578
Xenopus laevis
CBF67578
I
0.000
CBF67672
Xenopus laevis
CBF67672
I
0.000
CBU92428
Xenopus laevis
CBU92428
I
0.000
CBU92450
Xenopus laevis
CBU92450
I
0.000
CBU92451
Xenopus laevis
CBU92451
I
0.000
CBU92546
Xenopus laevis
CBU92546
I
0.000
ENSACAG00000007169
Anolis carolinensis
ENSACAG00000007169
I
0.000
HNRNPA3
Anolis carolinensis
ENSACAG00000012234
I
0.000
HNRNPA2B1
Anolis carolinensis
ENSACAG00000012992
I
0.000
ROA1_BOVIN
Bos taurus
ENSBTAG00000001553
I
0.000
LOC516616
Bos taurus
ENSBTAG00000002284
I
0.000
ROA2_BOVIN
Bos taurus
ENSBTAG00000005726
I
0.000
ENSBTAG00000011195
Bos taurus
ENSBTAG00000011195
I
0.000
ENSBTAG00000020849
Bos taurus
ENSBTAG00000020849
I
0.000
LOC781499
Bos taurus
ENSBTAG00000021580
I
0.000
LOC785445
Bos taurus
ENSBTAG00000025621
I
0.000
LOC538435
Bos taurus
ENSBTAG00000038680
I
0.000
XM_844664.1
Canis familiaris
ENSCAFG00000000687
I
0.000
ENSCAFG00000001973
Canis familiaris
ENSCAFG00000001973
I
0.000
HNRNPA2B1
Canis familiaris
ENSCAFG00000002885
I
0.000
ENSCAFG00000003493
Canis familiaris
ENSCAFG00000003493
I
0.000
ENSCAFG00000003921
Canis familiaris
ENSCAFG00000003921
I
0.000
ENSCAFG00000004202
Canis familiaris
ENSCAFG00000004202
I
0.000
XM_854536.1
Canis familiaris
ENSCAFG00000005046
I
0.000
ENSCAFG00000005308
Canis familiaris
ENSCAFG00000005308
I
0.000
ENSCAFG00000006036
Canis familiaris
ENSCAFG00000006036
I
0.000
XM_855847.1
Canis familiaris
ENSCAFG00000006327
I
0.000
XM_534786.2
Canis familiaris
ENSCAFG00000006580
I
0.000
ENSCAFG00000006784
Canis familiaris
ENSCAFG00000006784
I
0.000
ENSCAFG00000007879
Canis familiaris
ENSCAFG00000007879
I
0.000
ENSCAFG00000008301
Canis familiaris
ENSCAFG00000008301
I
0.000
ENSCAFG00000008379
Canis familiaris
ENSCAFG00000008379
I
0.000
ENSCAFG00000009412
Canis familiaris
ENSCAFG00000009412
I
0.000
ENSCAFG00000010153
Canis familiaris
ENSCAFG00000010153
I
0.000
ENSCAFG00000011035
Canis familiaris
ENSCAFG00000011035
I
0.000
ENSCAFG00000013303
Canis familiaris
ENSCAFG00000013303
I
0.000
ENSCAFG00000013497
Canis familiaris
ENSCAFG00000013497
I
0.000
ENSCAFG00000014691
Canis familiaris
ENSCAFG00000014691
I
0.000
ENSCAFG00000015319
Canis familiaris
ENSCAFG00000015319
I
0.000
ENSCAFG00000017316
Canis familiaris
ENSCAFG00000017316
I
0.000
ENSCAFG00000017494
Canis familiaris
ENSCAFG00000017494
I
0.000
ENSCAFG00000018186
Canis familiaris
ENSCAFG00000018186
I
0.000
ENSCAFG00000019104
Canis familiaris
ENSCAFG00000019104
I
0.000
ENSCAFG00000019118
Canis familiaris
ENSCAFG00000019118
I
0.000
ENSCAFG00000020238
Canis familiaris
ENSCAFG00000020238
I
0.000
XM_852631.1
Canis familiaris
ENSCAFG00000023680
I
0.000
ENSCAFG00000024951
Canis familiaris
ENSCAFG00000024951
I
0.000
HNRNPA2B1
Choloepus hoffmanni
ENSCHOG00000013832
I
0.000
ENSCJAG00000000095
Callithrix jacchus
ENSCJAG00000000095
I
0.000
ENSCJAG00000001353
Callithrix jacchus
ENSCJAG00000001353
I
0.000
LOC100409067
Callithrix jacchus
ENSCJAG00000003245
I
0.000
LOC100397230
Callithrix jacchus
ENSCJAG00000004031
I
0.000
ENSCJAG00000004902
Callithrix jacchus
ENSCJAG00000004902
I
0.000
ENSCJAG00000005326
Callithrix jacchus
ENSCJAG00000005326
I
0.000
LOC100401647
Callithrix jacchus
ENSCJAG00000007908
I
0.000
ENSCJAG00000008584
Callithrix jacchus
ENSCJAG00000008584
I
0.000
LOC100413454
Callithrix jacchus
ENSCJAG00000009030
I
0.000
ENSCJAG00000009723
Callithrix jacchus
ENSCJAG00000009723
I
0.000
LOC100397230
Callithrix jacchus
ENSCJAG00000014791
I
0.000
LOC100397230
Callithrix jacchus
ENSCJAG00000018864
I
0.000
ENSCJAG00000019479
Callithrix jacchus
ENSCJAG00000019479
I
0.000
ENSCJAG00000021872
Callithrix jacchus
ENSCJAG00000021872
I
0.000
LOC100411573
Callithrix jacchus
ENSCJAG00000023383
I
0.000
LOC100410389
Callithrix jacchus
ENSCJAG00000023392
I
0.000
ENSCJAG00000031552
Callithrix jacchus
ENSCJAG00000031552
I
0.000
ENSCJAG00000032417
Callithrix jacchus
ENSCJAG00000032417
I
0.000
ENSCJAG00000033856
Callithrix jacchus
ENSCJAG00000033856
I
0.000
ENSCPOG00000004251
Cavia porcellus
ENSCPOG00000004251
I
0.000
HNRNPA3
Cavia porcellus
ENSCPOG00000011301
I
0.000
ENSCPOG00000021077
Cavia porcellus
ENSCPOG00000021077
I
0.000
hnrnpa3
Danio rerio
ENSDARG00000059351
I
0.000
ENSDNOG00000009228
Dasypus novemcinctus
ENSDNOG00000009228
I
0.000
HNRNPA2B1
Dasypus novemcinctus
ENSDNOG00000012928
I
0.000
HNRNPA3
Dasypus novemcinctus
ENSDNOG00000019022
I
0.000
Hnrnpa2b1
Dipodomys ordii
ENSDORG00000005482
I
0.000
Hnrnpa1
Dipodomys ordii
ENSDORG00000010628
I
0.000
LOC100068539
Equus caballus
ENSECAG00000000782
I
0.000
LOC100054206
Equus caballus
ENSECAG00000006699
I
0.000
Q6DTK6_HORSE
Equus caballus
ENSECAG00000008676
I
0.000
LOC100066794
Equus caballus
ENSECAG00000023237
I
0.000
ENSEEUG00000000494
Erinaceus europaeus
ENSEEUG00000000494
I
0.000
ENSEEUG00000006130
Erinaceus europaeus
ENSEEUG00000006130
I
0.000
HNRNPA2B1
Echinops telfairi
ENSETEG00000018577
I
0.000
ENSFCAG00000010150
Felis catus
ENSFCAG00000010150
I
0.000
HNRNPA3
Felis catus
ENSFCAG00000012146
I
0.000
HNRNPA2B1
Homo sapiens
ENSG00000122566
D
0.000
HNRNPA1
Homo sapiens
ENSG00000135486
D
0.000
HNRNPA1L2
Homo sapiens
ENSG00000139675
D
0.000
HNRNPA3
Homo sapiens
ENSG00000170144
I
0.000
ENSG00000215492
Homo sapiens
ENSG00000215492
I
0.000
ENSGACG00000009435
Gasterosteus aculeatus
ENSGACG00000009435
I
0.000
HNRPA3
Gallus gallus
ENSGALG00000009250
I
0.000
Q5ZME1_CHICK
Gallus gallus
ENSGALG00000011036
I
0.000
HNRNPA1
Gorilla gorilla
ENSGGOG00000003040
I
0.000
HNRNPA3
Gorilla gorilla
ENSGGOG00000006130
I
0.000
HNRNPA2B1
Gorilla gorilla
ENSGGOG00000017072
I
0.000
ENSGGOG00000025381
Gorilla gorilla
ENSGGOG00000025381
I
0.000
ENSGGOG00000025446
Gorilla gorilla
ENSGGOG00000025446
I
0.000
HNRNPA2B1
Loxodonta africana
ENSLAFG00000006902
I
0.000
ENSLAFG00000026657
Loxodonta africana
ENSLAFG00000026657
I
0.000
ENSLAFG00000029587
Loxodonta africana
ENSLAFG00000029587
I
0.000
ENSLAFG00000030769
Loxodonta africana
ENSLAFG00000030769
I
0.000
ENSMEUG00000001084
Macropus eugenii
ENSMEUG00000001084
I
0.000
HNRNPA3
Macropus eugenii
ENSMEUG00000013622
I
0.000
ENSMGAG00000007630
Meleagris gallopavo
ENSMGAG00000007630
I
0.000
HNRNPA3
Meleagris gallopavo
ENSMGAG00000009565
I
0.000
HNRNPA2B1
Meleagris gallopavo
ENSMGAG00000010635
I
0.000
ENSMLUG00000000648
Myotis lucifugus
ENSMLUG00000000648
I
0.000
ENSMLUG00000000788
Myotis lucifugus
ENSMLUG00000000788
I
0.000
ENSMLUG00000003232
Myotis lucifugus
ENSMLUG00000003232
I
0.000
HNRNPA3
Myotis lucifugus
ENSMLUG00000003906
I
0.000
HNRNPA2B1
Myotis lucifugus
ENSMLUG00000007578
I
0.000
ENSMMUG00000001858
Macaca mulatta
ENSMMUG00000001858
I
0.000
HNRNPA2B1
Macaca mulatta
ENSMMUG00000003619
I
0.000
ENSMMUG00000005750
Macaca mulatta
ENSMMUG00000005750
I
0.000
ENSMMUG00000007695
Macaca mulatta
ENSMMUG00000007695
I
0.000
LOC710473
Macaca mulatta
ENSMMUG00000007887
I
0.000
LOC710473
Macaca mulatta
ENSMMUG00000007928
I
0.000
ENSMMUG00000008337
Macaca mulatta
ENSMMUG00000008337
I
0.000
XR_011984.1
Macaca mulatta
ENSMMUG00000011640
I
0.000
LOC710473
Macaca mulatta
ENSMMUG00000012989
I
0.000
ENSMMUG00000013424
Macaca mulatta
ENSMMUG00000013424
I
0.000
ENSMMUG00000022448
Macaca mulatta
ENSMMUG00000022448
I
0.000
LOC710473
Macaca mulatta
ENSMMUG00000029402
I
0.000
ROA1_MACMU
Macaca mulatta
ENSMMUG00000031613
I
0.000
HNRNPA2B1
Monodelphis domestica
ENSMODG00000000603
I
0.000
HNRNPA3
Monodelphis domestica
ENSMODG00000019803
I
0.000
ENSMODG00000023422
Monodelphis domestica
ENSMODG00000023422
I
0.000
Hnrnpa2b1
Mus musculus
ENSMUSG00000004980
I
0.000
ENSMUSG00000021927
Mus musculus
ENSMUSG00000021927
I
0.000
Hnrnpa1
Mus musculus
ENSMUSG00000046434
I
0.000
Hnrnpa3
Mus musculus
ENSMUSG00000059005
I
0.000
Gm8991
Mus musculus
ENSMUSG00000059179
I
0.000
HNRNPA2B1
Ornithorhynchus anatinus
ENSOANG00000009159
I
0.000
HNRNPA3
Oryctolagus cuniculus
ENSOCUG00000002743
I
0.000
ENSOCUG00000010985
Oryctolagus cuniculus
ENSOCUG00000010985
I
0.000
ENSOCUG00000013350
Oryctolagus cuniculus
ENSOCUG00000013350
I
0.000
ENSOCUG00000021006
Oryctolagus cuniculus
ENSOCUG00000021006
I
0.000
ENSOCUG00000021007
Oryctolagus cuniculus
ENSOCUG00000021007
I
0.000
ENSOCUG00000022568
Oryctolagus cuniculus
ENSOCUG00000022568
I
0.000
ENSOCUG00000022668
Oryctolagus cuniculus
ENSOCUG00000022668
I
0.000
ENSOCUG00000023322
Oryctolagus cuniculus
ENSOCUG00000023322
I
0.000
ENSOCUG00000023444
Oryctolagus cuniculus
ENSOCUG00000023444
I
0.000
ENSOCUG00000023674
Oryctolagus cuniculus
ENSOCUG00000023674
I
0.000
HNRNPA2B1
Oryctolagus cuniculus
ENSOCUG00000026859
I
0.000
ENSOCUG00000028124
Oryctolagus cuniculus
ENSOCUG00000028124
I
0.000
ENSOGAG00000002398
Otolemur garnettii
ENSOGAG00000002398
I
0.000
ENSOGAG00000009945
Otolemur garnettii
ENSOGAG00000009945
I
0.000
ENSOGAG00000017179
Otolemur garnettii
ENSOGAG00000017179
I
0.000
ENSOPRG00000006107
Ochotona princeps
ENSOPRG00000006107
I
0.000
HNRNPA2B1
Ochotona princeps
ENSOPRG00000011698
I
0.000
ENSORLG00000008001
Oryzias latipes
ENSORLG00000008001
I
0.000
HNRNPA3
Oryzias latipes
ENSORLG00000017561
I
0.000
ENSPPYG00000012967
Pongo pygmaeus
ENSPPYG00000012967
I
0.000
ENSPPYG00000017715
Pongo pygmaeus
ENSPPYG00000017715
I
0.000
ENSPPYG00000017853
Pongo pygmaeus
ENSPPYG00000017853
I
0.000
ROA1_PANTR
Pan troglodytes
ENSPTRG00000005035
I
0.000
HNRNPA3
Pan troglodytes
ENSPTRG00000012676
I
0.000
HNRNPA2B1
Pan troglodytes
ENSPTRG00000019002
I
0.000
ROA1_PANTR
Pan troglodytes
ENSPTRG00000028756
I
0.000
ROA1_PANTR
Pan troglodytes
ENSPTRG00000031363
I
0.000
HNRNPA1L2
Pan troglodytes
ENSPTRG00000032520
I
0.000
ENSPVAG00000000322
Pteropus vampyrus
ENSPVAG00000000322
I
0.000
HNRNPA2B1
Pteropus vampyrus
ENSPVAG00000006296
I
0.000
HNRNPA3
Pteropus vampyrus
ENSPVAG00000010380
I
0.000
LOC100360986
Rattus norvegicus
ENSRNOG00000001556
I
0.000
ENSRNOG00000005951
Rattus norvegicus
ENSRNOG00000005951
I
0.000
Hnrnpa2b1
Rattus norvegicus
ENSRNOG00000011175
I
0.000
D4A1X0_RAT
Rattus norvegicus
ENSRNOG00000021254
I
0.000
D4AD23_RAT
Rattus norvegicus
ENSRNOG00000025891
I
0.000
ROA3_RAT
Rattus norvegicus
ENSRNOG00000027001
I
0.000
D4A491_RAT
Rattus norvegicus
ENSRNOG00000029531
I
0.000
D3ZTB7_RAT
Rattus norvegicus
ENSRNOG00000031608
I
0.000
ENSRNOG00000033182
Rattus norvegicus
ENSRNOG00000033182
I
0.000
Hnrnpa1
Rattus norvegicus
ENSRNOG00000036839
I
0.000
D3ZXA3_RAT
Rattus norvegicus
ENSRNOG00000038905
I
0.000
ENSRNOG00000039436
Rattus norvegicus
ENSRNOG00000039436
I
0.000
ENSSARG00000008946
Sorex araneus
ENSSARG00000008946
I
0.000
ENSSSCG00000000288
Sus scrofa
ENSSSCG00000000288
I
0.000
ENSSSCG00000012503
Sus scrofa
ENSSSCG00000012503
I
0.000
ENSSSCG00000013557
Sus scrofa
ENSSSCG00000013557
I
0.000
ENSSSCG00000013561
Sus scrofa
ENSSSCG00000013561
I
0.000
ENSSSCG00000013607
Sus scrofa
ENSSSCG00000013607
I
0.000
ENSSSCG00000015836
Sus scrofa
ENSSSCG00000015836
I
0.000
HNRNPA3
Sus scrofa
ENSSSCG00000015988
I
0.000
ENSSSCG00000016710
Sus scrofa
ENSSSCG00000016710
I
0.000
ENSSTOG00000006202
Spermophilus tridecemlineatus
ENSSTOG00000006202
I
0.000
ENSSTOG00000009092
Spermophilus tridecemlineatus
ENSSTOG00000009092
I
0.000
HNRNPA2B1
Tupaia belangeri
ENSTBEG00000003219
I
0.000
ENSTBEG00000008238
Tupaia belangeri
ENSTBEG00000008238
I
0.000
ENSTBEG00000016272
Tupaia belangeri
ENSTBEG00000016272
I
0.000
HNRNPA2B1
Taeniopygia guttata
ENSTGUG00000002869
I
0.000
HNRNPA3
Taeniopygia guttata
ENSTGUG00000008996
I
0.000
ENSTNIG00000015047
Tetraodon nigroviridis
ENSTNIG00000015047
I
0.000
Q1KKU4_FUGRU
Takifugu rubripes
ENSTRUG00000002190
I
0.000
HNRNPA2B1
Tarsius syrichta
ENSTSYG00000008124
N
0.000
HNRNPA2B1
Tursiops truncatus
ENSTTRG00000000709
I
0.000
ENSTTRG00000004505
Tursiops truncatus
ENSTTRG00000004505
I
0.000
HNRNPA3
Tursiops truncatus
ENSTTRG00000014225
I
0.000
HNRNPA2B1
Vicugna pacos
ENSVPAG00000010417
I
0.000
hnrnpa3
Xenopus tropicalis
ENSXETG00000001806
I
0.000
hnrnpa2b1
Xenopus tropicalis
ENSXETG00000012170
I
0.000
hnrnpa1
Xenopus tropicalis
ENSXETG00000021277
I
0.000
P17130
Xenopus laevis
P17130
I
0.000
P51968
Xenopus laevis
P51968
I
0.000
P51989
Xenopus laevis
P51989
I
0.000
P51990
Xenopus laevis
P51990
I
0.000
P51992
Xenopus laevis
P51992
I
0.000