ENSCAFG00000008301 (Canis familiaris)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCAFG00000008301 T35063_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPA1
M312_0.6 		Homo sapiens Sequence logo not available UAGGGW RIP-chip
Cook et al.(2011)
560_17925491 		0.838
HNRNPA1
M271_0.6 		Homo sapiens UAGGGW SELEX
Cook et al.(2011)
23_7510636 		0.838
HNRNPA1
M022_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00022 		0.838
HNRNPA1L2
M023_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00023 		0.824
HNRNPA2B1
M024_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00024 		0.718
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCAFP00000012186 RRM 36 103
ENSCAFP00000012186 RRM 125 194

Links

Other RRM family RBPs
Other Canis familiaris RBPs

253 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSCAFG00000015319 Canis familiaris ENSCAFG00000015319 I 0.863
ENSCAFG00000011035 Canis familiaris ENSCAFG00000011035 I 0.851
ENSCAFG00000007879 Canis familiaris ENSCAFG00000007879 I 0.837
LOC710473 Macaca mulatta ENSMMUG00000007887 I 0.832
ENSCJAG00000001353 Callithrix jacchus ENSCJAG00000001353 I 0.830
HNRNPA1 Homo sapiens ENSG00000135486 D 0.825
ENSG00000215492 Homo sapiens ENSG00000215492 I 0.825
ENSMLUG00000000648 Myotis lucifugus ENSMLUG00000000648 I 0.825
ENSLAFG00000029587 Loxodonta africana ENSLAFG00000029587 I 0.825
HNRNPA1 Gorilla gorilla ENSGGOG00000003040 I 0.825
ENSFCAG00000010150 Felis catus ENSFCAG00000010150 I 0.825
ENSCJAG00000019479 Callithrix jacchus ENSCJAG00000019479 I 0.825
LOC100397230 Callithrix jacchus ENSCJAG00000018864 I 0.825
ENSCJAG00000033856 Callithrix jacchus ENSCJAG00000033856 I 0.825
ENSDNOG00000009228 Dasypus novemcinctus ENSDNOG00000009228 I 0.825
Q6DTK6_HORSE Equus caballus ENSECAG00000008676 I 0.825
LOC710473 Macaca mulatta ENSMMUG00000012989 I 0.825
ROA1_PANTR Pan troglodytes ENSPTRG00000005035 I 0.825
ENSTBEG00000008238 Tupaia belangeri ENSTBEG00000008238 I 0.825
ENSSSCG00000000288 Sus scrofa ENSSSCG00000000288 I 0.825
ENSTTRG00000004505 Tursiops truncatus ENSTTRG00000004505 I 0.825
Ame_R011792 Ailuropoda melanoleuca Ame_R011792 I 0.825
XM_534786.2 Canis familiaris ENSCAFG00000006580 I 0.825
ROA1_BOVIN Bos taurus ENSBTAG00000001553 I 0.825
Hnrnpa1 Rattus norvegicus ENSRNOG00000036839 I 0.825
ENSPVAG00000000322 Pteropus vampyrus ENSPVAG00000000322 I 0.825
LOC100413454 Callithrix jacchus ENSCJAG00000009030 I 0.825
ENSOCUG00000023674 Oryctolagus cuniculus ENSOCUG00000023674 I 0.825
ROA1_PANTR Pan troglodytes ENSPTRG00000028756 I 0.825
ROA1_PANTR Pan troglodytes ENSPTRG00000031363 I 0.825
HNRNPA1L2 Pan troglodytes ENSPTRG00000032520 I 0.825
ENSOCUG00000013350 Oryctolagus cuniculus ENSOCUG00000013350 I 0.825
Hnrnpa1 Mus musculus ENSMUSG00000046434 I 0.825
ENSCAFG00000024951 Canis familiaris ENSCAFG00000024951 I 0.824
ENSCAFG00000019118 Canis familiaris ENSCAFG00000019118 I 0.824
ENSCAFG00000020238 Canis familiaris ENSCAFG00000020238 I 0.823
XM_852631.1 Canis familiaris ENSCAFG00000023680 I 0.823
ENSCAFG00000019104 Canis familiaris ENSCAFG00000019104 I 0.821
ENSOCUG00000010985 Oryctolagus cuniculus ENSOCUG00000010985 I 0.818
LOC710473 Macaca mulatta ENSMMUG00000029402 I 0.818
ENSOCUG00000021007 Oryctolagus cuniculus ENSOCUG00000021007 I 0.818
ENSGGOG00000025381 Gorilla gorilla ENSGGOG00000025381 I 0.818
ENSOCUG00000023444 Oryctolagus cuniculus ENSOCUG00000023444 I 0.818
ENSACAG00000007169 Anolis carolinensis ENSACAG00000007169 I 0.818
XM_854536.1 Canis familiaris ENSCAFG00000005046 I 0.818
ENSOPRG00000006107 Ochotona princeps ENSOPRG00000006107 I 0.818
LOC100397230 Callithrix jacchus ENSCJAG00000004031 I 0.818
ENSOCUG00000023322 Oryctolagus cuniculus ENSOCUG00000023322 I 0.818
ENSOCUG00000022568 Oryctolagus cuniculus ENSOCUG00000022568 I 0.818
ENSOCUG00000028124 Oryctolagus cuniculus ENSOCUG00000028124 I 0.818
LOC100054206 Equus caballus ENSECAG00000006699 I 0.816
ENSMLUG00000000788 Myotis lucifugus ENSMLUG00000000788 I 0.816
HNRNPA1L2 Homo sapiens ENSG00000139675 D 0.811
ENSMLUG00000003232 Myotis lucifugus ENSMLUG00000003232 I 0.811
ENSEEUG00000006130 Erinaceus europaeus ENSEEUG00000006130 I 0.811
ENSCAFG00000010153 Canis familiaris ENSCAFG00000010153 I 0.811
ENSMUSG00000021927 Mus musculus ENSMUSG00000021927 I 0.804
ENSOGAG00000009945 Otolemur garnettii ENSOGAG00000009945 I 0.804
ROA1_MACMU Macaca mulatta ENSMMUG00000031613 I 0.804
LOC710473 Macaca mulatta ENSMMUG00000007928 I 0.804
ENSCAFG00000006784 Canis familiaris ENSCAFG00000006784 I 0.804
ENSLAFG00000026657 Loxodonta africana ENSLAFG00000026657 I 0.804
ENSCJAG00000031552 Callithrix jacchus ENSCJAG00000031552 I 0.804
ENSOCUG00000022668 Oryctolagus cuniculus ENSOCUG00000022668 I 0.804
LOC100409067 Callithrix jacchus ENSCJAG00000003245 I 0.804
ENSCAFG00000004202 Canis familiaris ENSCAFG00000004202 I 0.801
ENSCAFG00000024824 Canis familiaris ENSCAFG00000024824 I 0.801
ENSCAFG00000003493 Canis familiaris ENSCAFG00000003493 I 0.801
ENSCAFG00000008379 Canis familiaris ENSCAFG00000008379 I 0.800
ENSMGAG00000007630 Meleagris gallopavo ENSMGAG00000007630 I 0.799
ENSLAFG00000029171 Loxodonta africana ENSLAFG00000029171 I 0.799
LOC785445 Bos taurus ENSBTAG00000025621 I 0.797
LOC100410389 Callithrix jacchus ENSCJAG00000023392 I 0.797
ENSCPOG00000021077 Cavia porcellus ENSCPOG00000021077 I 0.797
ENSOCUG00000021006 Oryctolagus cuniculus ENSOCUG00000021006 I 0.797
ENSMMUG00000007695 Macaca mulatta ENSMMUG00000007695 I 0.796
XM_543834.2 Canis familiaris ENSCAFG00000002157 I 0.794
ENSCAFG00000001973 Canis familiaris ENSCAFG00000001973 I 0.794
ENSRNOG00000005951 Rattus norvegicus ENSRNOG00000005951 I 0.790
hnrnpa1 Xenopus tropicalis ENSXETG00000021277 I 0.790
D4A491_RAT Rattus norvegicus ENSRNOG00000029531 I 0.790
ENSRNOG00000039436 Rattus norvegicus ENSRNOG00000039436 I 0.790
AAH45260 Xenopus laevis AAH45260 I 0.790
ENSPPYG00000017853 Pongo pygmaeus ENSPPYG00000017853 I 0.790
AAH72090 Xenopus laevis AAH72090 I 0.783
ENSLAFG00000030769 Loxodonta africana ENSLAFG00000030769 I 0.783
ENSRNOG00000033182 Rattus norvegicus ENSRNOG00000033182 I 0.783
ENSEEUG00000000494 Erinaceus europaeus ENSEEUG00000000494 I 0.783
CBF67672 Xenopus laevis CBF67672 I 0.783
ENSTBEG00000016272 Tupaia belangeri ENSTBEG00000016272 I 0.783
CBU92546 Xenopus laevis CBU92546 I 0.783
XM_855847.1 Canis familiaris ENSCAFG00000006327 I 0.783
ENSCAFG00000005308 Canis familiaris ENSCAFG00000005308 I 0.782
ENSCAFG00000018186 Canis familiaris ENSCAFG00000018186 I 0.780
ENSMODG00000023422 Monodelphis domestica ENSMODG00000023422 I 0.780
ENSMICG00000009289 Microcebus murinus ENSMICG00000009289 I 0.780
ENSCJAG00000010169 Callithrix jacchus ENSCJAG00000010169 I 0.776
ENSCJAG00000004902 Callithrix jacchus ENSCJAG00000004902 I 0.776
ENSCJAG00000035202 Callithrix jacchus ENSCJAG00000035202 I 0.776
ENSCJAG00000032417 Callithrix jacchus ENSCJAG00000032417 I 0.776
ENSCJAG00000009723 Callithrix jacchus ENSCJAG00000009723 I 0.776
D4AD23_RAT Rattus norvegicus ENSRNOG00000025891 I 0.776
ENSCJAG00000016375 Callithrix jacchus ENSCJAG00000016375 I 0.775
XM_001106745.1 Macaca mulatta ENSMMUG00000031809 I 0.773
XR_010472.1 Macaca mulatta ENSMMUG00000012991 I 0.773
P17130 Xenopus laevis P17130 I 0.769
CBU92428 Xenopus laevis CBU92428 I 0.769
CBF67555 Xenopus laevis CBF67555 I 0.769
AAA49741 Xenopus laevis AAA49741 I 0.769
XP_541811.1 Canis familiaris ENSCAFG00000006586 I 0.769
AAA49742 Xenopus laevis AAA49742 I 0.769
D4A2D2_RAT Rattus norvegicus ENSRNOG00000021986 I 0.769
ENSMODG00000006291 Monodelphis domestica ENSMODG00000006291 I 0.766
ENSCJAG00000007250 Callithrix jacchus ENSCJAG00000007250 I 0.762
LOC100397230 Callithrix jacchus ENSCJAG00000014791 I 0.762
ENSRNOG00000011100 Rattus norvegicus ENSRNOG00000011100 I 0.762
ENSOCUG00000022627 Oryctolagus cuniculus ENSOCUG00000022627 I 0.762
ENSTBEG00000012511 Tupaia belangeri ENSTBEG00000012511 I 0.762
ENSCJAG00000000095 Callithrix jacchus ENSCJAG00000000095 I 0.762
ENSGACG00000009435 Gasterosteus aculeatus ENSGACG00000009435 I 0.762
ENSCAFG00000005164 Canis familiaris ENSCAFG00000005164 I 0.755
ENSGGOG00000025827 Gorilla gorilla ENSGGOG00000025827 I 0.755
ENSETEG00000015332 Echinops telfairi ENSETEG00000015332 I 0.755
ENSCAFG00000005207 Canis familiaris ENSCAFG00000005207 I 0.755
ENSRNOG00000021280 Rattus norvegicus ENSRNOG00000021280 I 0.755
ENSCAFG00000002059 Canis familiaris ENSCAFG00000002059 I 0.755
ENSMMUG00000031948 Macaca mulatta ENSMMUG00000031948 I 0.755
ENSCAFG00000017316 Canis familiaris ENSCAFG00000017316 I 0.748
ENSCAFG00000014094 Canis familiaris ENSCAFG00000014094 I 0.748
ENSORLG00000008001 Oryzias latipes ENSORLG00000008001 I 0.748
XP_848548.1 Canis familiaris ENSCAFG00000016313 I 0.748
Hnrnpa1 Dipodomys ordii ENSDORG00000010628 I 0.748
ENSSTOG00000015259 Spermophilus tridecemlineatus ENSSTOG00000015259 I 0.748
ENSSARG00000008946 Sorex araneus ENSSARG00000008946 I 0.748
ENSCJAG00000001302 Callithrix jacchus ENSCJAG00000001302 I 0.745
ENSPCAG00000001867 Procavia capensis ENSPCAG00000001867 I 0.745
ENSCJAG00000020672 Callithrix jacchus ENSCJAG00000020672 I 0.741
HNRNPA3 Anolis carolinensis ENSACAG00000012234 I 0.741
hnrnpa3 Xenopus tropicalis ENSXETG00000001806 I 0.741
ENSCJAG00000017130 Callithrix jacchus ENSCJAG00000017130 I 0.741
ENSGGOG00000027879 Gorilla gorilla ENSGGOG00000027879 I 0.741
ENSCAFG00000025274 Canis familiaris ENSCAFG00000025274 I 0.741
ENSCAFG00000014691 Canis familiaris ENSCAFG00000014691 I 0.738
HNRNPA3 Sus scrofa ENSSSCG00000015988 I 0.736
HNRNPA3 Myotis lucifugus ENSMLUG00000003906 I 0.736
LOC100360986 Rattus norvegicus ENSRNOG00000001556 I 0.736
HNRNPA3 Gorilla gorilla ENSGGOG00000006130 I 0.736
ROA3_RAT Rattus norvegicus ENSRNOG00000027001 I 0.736
HNRNPA3 Macropus eugenii ENSMEUG00000013622 I 0.736
HNRNPA3 Monodelphis domestica ENSMODG00000019803 I 0.736
ENSCAFG00000013497 Canis familiaris ENSCAFG00000013497 I 0.736
ENSCPOG00000004251 Cavia porcellus ENSCPOG00000004251 I 0.736
ENSMMUG00000001858 Macaca mulatta ENSMMUG00000001858 I 0.736
HNRNPA3 Cavia porcellus ENSCPOG00000011301 I 0.736
HNRNPA3 Homo sapiens ENSG00000170144 I 0.736
LOC781499 Bos taurus ENSBTAG00000021580 I 0.736
HNRNPA3 Dasypus novemcinctus ENSDNOG00000019022 I 0.736
HNRNPA3 Pteropus vampyrus ENSPVAG00000010380 I 0.736
HNRNPA3 Tursiops truncatus ENSTTRG00000014225 I 0.736
LOC100411573 Callithrix jacchus ENSCJAG00000023383 I 0.736
HNRNPA3 Pan troglodytes ENSPTRG00000012676 I 0.736
Hnrnpa3 Mus musculus ENSMUSG00000059005 I 0.736
HNRNPA3 Taeniopygia guttata ENSTGUG00000008996 I 0.734
AAA49949 Xenopus laevis AAA49949 I 0.734
HNRPA3 Gallus gallus ENSGALG00000009250 I 0.734
Ame_R018030 Ailuropoda melanoleuca Ame_R018030 I 0.734
Q1KKU4_FUGRU Takifugu rubripes ENSTRUG00000002190 I 0.734
Gm8991 Mus musculus ENSMUSG00000059179 I 0.734
LOC100066794 Equus caballus ENSECAG00000023237 I 0.734
P51968 Xenopus laevis P51968 I 0.734
ENSCJAG00000001737 Callithrix jacchus ENSCJAG00000001737 I 0.734
HNRNPA3 Meleagris gallopavo ENSMGAG00000009565 I 0.734
ENSCJAG00000033784 Callithrix jacchus ENSCJAG00000033784 I 0.734
HNRNPA3 Felis catus ENSFCAG00000012146 I 0.734
ENSCAFG00000013932 Canis familiaris ENSCAFG00000013932 I 0.734
ENSCAFG00000007198 Canis familiaris ENSCAFG00000007198 I 0.733
D3ZXA3_RAT Rattus norvegicus ENSRNOG00000038905 I 0.732
HNRNPA3 Oryctolagus cuniculus ENSOCUG00000002743 I 0.729
XM_844664.1 Canis familiaris ENSCAFG00000000687 I 0.728
ENSGGOG00000025265 Gorilla gorilla ENSGGOG00000025265 I 0.727
ENSSSCG00000005428 Sus scrofa ENSSSCG00000005428 I 0.727
ENSMMUG00000018397 Macaca mulatta ENSMMUG00000018397 I 0.727
ENSCJAG00000007639 Callithrix jacchus ENSCJAG00000007639 I 0.727
ENSCAFG00000016707 Canis familiaris ENSCAFG00000016707 I 0.727
ENSCAFG00000024812 Canis familiaris ENSCAFG00000024812 I 0.727
ENSMMUG00000022448 Macaca mulatta ENSMMUG00000022448 I 0.726
CBU92451 Xenopus laevis CBU92451 I 0.724
P51992 Xenopus laevis P51992 I 0.724
ENSCAFG00000007918 Canis familiaris ENSCAFG00000007918 I 0.724
AAA49950 Xenopus laevis AAA49950 I 0.724
HNRNPA2B1 Taeniopygia guttata ENSTGUG00000002869 I 0.724
CBF67578 Xenopus laevis CBF67578 I 0.724
AAI69881 Xenopus laevis AAI69881 I 0.724
ENSRNOG00000042093 Rattus norvegicus ENSRNOG00000042093 I 0.723
ENSCAFG00000009412 Canis familiaris ENSCAFG00000009412 I 0.722
D3ZTB7_RAT Rattus norvegicus ENSRNOG00000031608 I 0.720
ENSTNIG00000015047 Tetraodon nigroviridis ENSTNIG00000015047 I 0.720
HNRNPA2B1 Gorilla gorilla ENSGGOG00000017072 I 0.717
LOC100068539 Equus caballus ENSECAG00000000782 I 0.717
ENSMEUG00000001084 Macropus eugenii ENSMEUG00000001084 I 0.717
LOC100401647 Callithrix jacchus ENSCJAG00000007908 I 0.717
HNRNPA2B1 Oryctolagus cuniculus ENSOCUG00000026859 I 0.717
ENSMEUG00000014479 Macropus eugenii ENSMEUG00000014479 I 0.717
ENSCJAG00000021872 Callithrix jacchus ENSCJAG00000021872 I 0.717
HNRNPA2B1 Echinops telfairi ENSETEG00000018577 I 0.717
HNRNPA2B1 Dasypus novemcinctus ENSDNOG00000012928 I 0.717
HNRNPA2B1 Pan troglodytes ENSPTRG00000019002 I 0.717
HNRNPA2B1 Meleagris gallopavo ENSMGAG00000010635 I 0.717
HNRNPA2B1 Loxodonta africana ENSLAFG00000006902 I 0.717
Hnrnpa2b1 Dipodomys ordii ENSDORG00000005482 I 0.717
Q5ZME1_CHICK Gallus gallus ENSGALG00000011036 I 0.717
Ame_R000626 Ailuropoda melanoleuca Ame_R000626 I 0.717
HNRNPA2B1 Ornithorhynchus anatinus ENSOANG00000009159 I 0.717
ENSSTOG00000006202 Spermophilus tridecemlineatus ENSSTOG00000006202 I 0.717
ENSPPYG00000017715 Pongo pygmaeus ENSPPYG00000017715 I 0.717
HNRNPA2B1 Homo sapiens ENSG00000122566 D 0.717
HNRNPA2B1 Monodelphis domestica ENSMODG00000000603 I 0.717
HNRNPA2B1 Tursiops truncatus ENSTTRG00000000709 I 0.717
Hnrnpa2b1 Rattus norvegicus ENSRNOG00000011175 I 0.717
HNRNPA2B1 Macaca mulatta ENSMMUG00000003619 I 0.717
ROA2_BOVIN Bos taurus ENSBTAG00000005726 I 0.717
HNRNPA2B1 Canis familiaris ENSCAFG00000002885 I 0.717
HNRNPA2B1 Pteropus vampyrus ENSPVAG00000006296 I 0.717
HNRNPA2B1 Myotis lucifugus ENSMLUG00000007578 I 0.717
Hnrnpa2b1 Mus musculus ENSMUSG00000004980 I 0.717
hnrnpa1 Danio rerio ENSDARG00000036675 I 0.713
ENSRNOG00000023438 Rattus norvegicus ENSRNOG00000023438 I 0.713
ENSMMUG00000013424 Macaca mulatta ENSMMUG00000013424 I 0.712
CBF67577 Xenopus laevis CBF67577 I 0.710
AAH46692 Xenopus laevis AAH46692 I 0.710
AAA49948 Xenopus laevis AAA49948 I 0.710
HNRNPA2B1 Choloepus hoffmanni ENSCHOG00000013832 I 0.710
ENSCAFG00000006036 Canis familiaris ENSCAFG00000006036 I 0.710
CBU92450 Xenopus laevis CBU92450 I 0.710
HNRNPA2B1 Anolis carolinensis ENSACAG00000012992 I 0.710
ENSMMUG00000008337 Macaca mulatta ENSMMUG00000008337 I 0.710
P51989 Xenopus laevis P51989 I 0.710
ENSCJAG00000005326 Callithrix jacchus ENSCJAG00000005326 I 0.708
ENSEEUG00000009941 Erinaceus europaeus ENSEEUG00000009941 I 0.706
ENSMMUG00000005750 Macaca mulatta ENSMMUG00000005750 I 0.703
AAH43750 Xenopus laevis AAH43750 I 0.703
ENSOGAG00000017179 Otolemur garnettii ENSOGAG00000017179 I 0.703
AAB59951 Xenopus laevis AAB59951 I 0.703
ENSSSCG00000015836 Sus scrofa ENSSSCG00000015836 I 0.703
P51990 Xenopus laevis P51990 I 0.703
AAI06633 Xenopus laevis AAI06633 I 0.703
ENSCAFG00000013303 Canis familiaris ENSCAFG00000013303 I 0.703
ENSCAFG00000003921 Canis familiaris ENSCAFG00000003921 I 0.703
ENSCAFG00000000746 Canis familiaris ENSCAFG00000000746 I 0.703
ENSPPYG00000012967 Pongo pygmaeus ENSPPYG00000012967 I 0.701
ENSPPYG00000001012 Pongo pygmaeus ENSPPYG00000001012 I 0.701
ENSCJAG00000008584 Callithrix jacchus ENSCJAG00000008584 I 0.701
ENSCAFG00000006663 Canis familiaris ENSCAFG00000006663 I 0.701