HNRNPA2B1 (Tursiops truncatus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSTTRG00000000709 T42528_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPA2B1
M024_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00024 		1.000
HNRNPA1
M312_0.6 		Homo sapiens Sequence logo not available UAGGGW RIP-chip
Cook et al.(2011)
560_17925491 		0.814
HNRNPA1
M271_0.6 		Homo sapiens UAGGGW SELEX
Cook et al.(2011)
23_7510636 		0.814
HNRNPA1
M022_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00022 		0.814
HNRNPA1L2
M023_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00023 		0.793
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTTRP00000000667 RRM 83 152
ENSTTRP00000000667 RRM 174 243

Links

Other RRM family RBPs
Other Tursiops truncatus RBPs

224 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
29428.m000321 Ricinus communis 29428.m000321 N 0.000
AT5G04600 Arabidopsis thaliana AT5G04600-TAIR-G N 0.000
BRADI3G35650 Brachypodium distachyon BRADI3G35650 N 0.000
Cucsa.364800 Cucumis sativus Cucsa.364800 N 0.000
Glyma02g29190.1 Glycine max Glyma02g29190.1 N 0.000
Glyma09g17080.1 Glycine max Glyma09g17080.1 N 0.000
GRMZM2G056350 Zea mays GRMZM2G056350 N 0.000
GSVIVG00021851001 Vitis vinifera GSVIVG00021851001 N 0.000
LOC_Os08g31810 Oryza sativa LOC_Os08g31810 N 0.000
MDP0000340057 Malus x domestica MDP0000340057 N 0.000
Medtr1g137330 Medicago truncatula Medtr1g137330 N 0.000
Medtr8g129780 Medicago truncatula Medtr8g129780 N 0.000
mgf009918m Mimulus guttatus mgf009918m N 0.000
PK02111.1 Cannabis sativa PK02111.1 N 0.000
B9HW06_POPTR Populus trichocarpa POPTR_0010s24120 N 0.000
ppa025985m Prunus persica ppa025985m N 0.000
Sb03g045720 Sorghum bicolor Sb03g045720 N 0.000
XM_002871058.1 Arabidopsis lyrata scaffold_600404.1 N 0.000