CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSMODG00000008402
(
Monodelphis domestica
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSMODG00000008402
T19095_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
hnRNPK
M026_0.6
Homo sapiens
CCAWMCC
RNAcompete
Ray et al.(2013)
RNCMPT00026
1.000
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMODP00000010448
KH
44
104
ELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKI
ENSMODP00000010448
KH
146
209
ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKII
ENSMODP00000010448
KH
389
451
TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLL
ENSMODP00000010452
KH
46
106
ELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKI
ENSMODP00000010452
KH
124
187
ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKII
ENSMODP00000010452
KH
367
429
TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLL
ENSMODP00000010457
KH
95
158
ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKII
Links
Other
KH
family RBPs
Other
Monodelphis domestica
RBPs
55 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
DAZAP1
Homo sapiens
ENSG00000071626
D
0.000
DAZAP1
Bos taurus
ENSBTAG00000019714
I
0.000
ENSPPYG00000009316
Pongo pygmaeus
ENSPPYG00000009316
I
0.000
DAZAP1
Pan troglodytes
ENSPTRG00000010199
I
0.000
DAZAP1
Pteropus vampyrus
ENSPVAG00000003169
I
0.000
Dazap1
Rattus norvegicus
ENSRNOG00000031387
I
0.000
DAZAP1
Spermophilus tridecemlineatus
ENSSTOG00000006401
I
0.000
DAZAP1
Taeniopygia guttata
ENSTGUG00000000869
I
0.000
DAZAP1
Tetraodon nigroviridis
ENSTNIG00000010201
I
0.000
DAZAP1
Takifugu rubripes
ENSTRUG00000002467
I
0.000
DAZAP1
Tursiops truncatus
ENSTTRG00000014336
I
0.000
dazap1
Xenopus tropicalis
ENSXETG00000003704
I
0.000
Ame_R011913
Ailuropoda melanoleuca
Ame_R011913
I
0.000
AAH77252
Xenopus laevis
AAH77252
I
0.000
AAK26172
Xenopus laevis
AAK26172
I
0.000
CBF67656
Xenopus laevis
CBF67656
I
0.000
CBU92530
Xenopus laevis
CBU92530
I
0.000
DAZAP1
Oryzias latipes
ENSORLG00000008278
I
0.000
DAZAP1
Otolemur garnettii
ENSOGAG00000000232
I
0.000
DAZAP1
Canis familiaris
ENSCAFG00000019528
I
0.000
LOC100395069
Callithrix jacchus
ENSCJAG00000005609
I
0.000
DAZAP1
Cavia porcellus
ENSCPOG00000020185
I
0.000
dazap1
Danio rerio
ENSDARG00000070846
I
0.000
LOC100068825
Equus caballus
ENSECAG00000011805
I
0.000
DAZAP1
Echinops telfairi
ENSETEG00000008636
I
0.000
DAZAP1
Gasterosteus aculeatus
ENSGACG00000008259
I
0.000
Q5ZM92_CHICK
Gallus gallus
ENSGALG00000015200
I
0.000
DAZAP1
Gorilla gorilla
ENSGGOG00000002814
I
0.000
DAZAP1
Loxodonta africana
ENSLAFG00000018103
I
0.000
ENSMGAG00000004149
Meleagris gallopavo
ENSMGAG00000004149
I
0.000
DAZAP1
Myotis lucifugus
ENSMLUG00000014975
I
0.000
DAZAP1
Macaca mulatta
ENSMMUG00000003047
I
0.000
Dazap1
Mus musculus
ENSMUSG00000069565
I
0.000
DAZAP1
Ornithorhynchus anatinus
ENSOANG00000014632
I
0.000
Q98SJ2
Xenopus laevis
Q98SJ2
I
0.000