ELAVL3 (Anolis carolinensis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSACAG00000016958 T34744_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ELAVL4
M315_0.6 		Homo sapiens Sequence logo not available UUUUUUUUUWAAA RIP-chip
Cook et al.(2011)
619_19846595.2 		0.920
ELAVL4
M314_0.6 		Homo sapiens Sequence logo not available KUUUGUUUKKUUU RIP-chip
Cook et al.(2011)
619_19846595.1 		0.920
ELAVL4
M313_0.6 		Homo sapiens Sequence logo not available CYCUCCYUCYCYC RIP-chip
Cook et al.(2011)
619_19846595 		0.920
ELAVL2
M330_0.6 		Homo sapiens RWUUUAUUUWR SELEX
Cook et al.(2011)
784_7972035 		0.910
ELAVL2
M329_0.6 		Homo sapiens RWUUUAUUUWR SELEX
Cook et al.(2011)
783_7972035 		0.910
ELAVL2
M328_0.6 		Homo sapiens MUYCUUUWUWUUY SELEX
Cook et al.(2011)
782_8497264 		0.910
ELAVL1
M127_0.6 		Homo sapiens UUKRUUU RNAcompete
Ray et al.(2013)
RNCMPT00136 		0.764
ELAVL1
M031_0.6 		Homo sapiens UUDUUUU RNAcompete
Ray et al.(2013)
RNCMPT00032 		0.764
ELAVL1
M327_0.6 		Homo sapiens Sequence logo not available KKNWWDNNNUKNNUUNUNNH RIP-chip
Cook et al.(2011)
714_14981256 		0.764
ELAVL1
M112_0.6 		Homo sapiens UUURKUU RNAcompete
Ray et al.(2013)
RNCMPT00117 		0.764
ELAVL1
M232_0.6 		Homo sapiens UUUUUUK RNAcompete
Ray et al.(2013)
RNCMPT00274 		0.764
ELAVL1
M108_0.6 		Homo sapiens UUWGUUU RNAcompete
Ray et al.(2013)
RNCMPT00112 		0.764
Rbp9
M124_0.6 		Drosophila melanogaster UUDDGUU RNAcompete
Ray et al.(2013)
RNCMPT00132 		0.704
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSACAP00000016683 RRM 41 111
ENSACAP00000016683 RRM 127 195
ENSACAP00000016683 RRM 285 355

Links

Other RRM family RBPs
Other Anolis carolinensis RBPs

191 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ELAVL4 Homo sapiens ENSG00000162374 D 0.911
Rbp9 Drosophila melanogaster FBgn0010263 D 0.709
ELAVL1 Homo sapiens ENSG00000066044 D 0.761
ELAVL2 Homo sapiens ENSG00000107105 D 0.901
ELAVL1 Sus scrofa ENSSSCG00000013592 I 0.765
ELAVL3 Sus scrofa ENSSSCG00000013617 I 0.958
ELAVL2 Sus scrofa ENSSSCG00000005130 I 0.901
ELAVL2 Spermophilus tridecemlineatus ENSSTOG00000007792 I 0.000
ELAVL1 Spermophilus tridecemlineatus ENSSTOG00000009130 I 0.746
ELAVL3 Tupaia belangeri ENSTBEG00000006133 I 0.825
ELAVL4 Tupaia belangeri ENSTBEG00000011730 I 0.770
ELAVL2 Tupaia belangeri ENSTBEG00000017759 I 0.717
ELAVL4 Spermophilus tridecemlineatus ENSSTOG00000002834 I 0.774
ELAVL1 Taeniopygia guttata ENSTGUG00000000118 I 0.756
ELAVL2 Taeniopygia guttata ENSTGUG00000001349 I 0.887
ELAVL2 Takifugu rubripes ENSTRUG00000007867 I 0.887
ELAVL1 Takifugu rubripes ENSTRUG00000007296 I 0.722
ELAVL1 Takifugu rubripes ENSTRUG00000004559 I 0.755
ELAVL4 Takifugu rubripes ENSTRUG00000000523 I 0.901
ELAVL1 Tetraodon nigroviridis ENSTNIG00000019823 I 0.751
ELAVL3 Tetraodon nigroviridis ENSTNIG00000018572 I 0.958
ELAVL4 Tetraodon nigroviridis ENSTNIG00000015485 I 0.901
ELAVL2 Tetraodon nigroviridis ENSTNIG00000011312 I 0.892
ELAVL4 Taeniopygia guttata ENSTGUG00000008597 I 0.911
ELAVL4 Sorex araneus ENSSARG00000010733 I 0.911
ELAVL3 Sorex araneus ENSSARG00000005949 I 0.797
ELAVL2 Sorex araneus ENSSARG00000005702 I 0.901
ENSPPYG00000009496 Pongo pygmaeus ENSPPYG00000009496 I 0.761
ENSPPYG00000001367 Pongo pygmaeus ENSPPYG00000001367 I 0.911
ELAVL2 Procavia capensis ENSPCAG00000014998 I 0.854
ELAVL4 Procavia capensis ENSPCAG00000008215 I 0.911
ELAVL4 Oryzias latipes ENSORLG00000017130 I 0.906
ELAVL1 Oryzias latipes ENSORLG00000012435 I 0.759
ELAVL3 Oryzias latipes ENSORLG00000005379 I 0.962
ELAVL2 Oryzias latipes ENSORLG00000004217 I 0.892
ELAVL1 Oryzias latipes ENSORLG00000000087 I 0.708
ELAVL4 Ochotona princeps ENSOPRG00000015300 I 0.911
ENSPPYG00000019166 Pongo pygmaeus ENSPPYG00000019166 I 0.901
ELAVL4 Pan troglodytes ENSPTRG00000000723 I 0.911
Elavl4 Rattus norvegicus ENSRNOG00000023601 I 0.911
Elavl3 Rattus norvegicus ENSRNOG00000013752 I 0.948
Elavl2 Rattus norvegicus ENSRNOG00000006853 I 0.901
Elavl1 Rattus norvegicus ENSRNOG00000001069 I 0.761
ELAVL3 Pteropus vampyrus ENSPVAG00000014893 I 0.958
ELAVL4 Pteropus vampyrus ENSPVAG00000003632 I 0.844
ELAVL2 Pteropus vampyrus ENSPVAG00000002688 I 0.901
ELAVL2 Pan troglodytes ENSPTRG00000020830 I 0.901
ELAVL3 Pan troglodytes ENSPTRG00000010506 I 0.929
ELAVL1 Pan troglodytes ENSPTRG00000010413 I 0.761
ELAVL2 Ochotona princeps ENSOPRG00000012874 I 0.901
ELAVL3 Takifugu rubripes ENSTRUG00000010719 I 0.962
Q91903 Xenopus laevis Q91903 I 0.906
AAA96945 Xenopus laevis AAA96945 I 0.911
AAA96944 Xenopus laevis AAA96944 I 0.981
AAA96943 Xenopus laevis AAA96943 I 0.906
AAA96942 Xenopus laevis AAA96942 I 0.746
Ame_R010167 Ailuropoda melanoleuca Ame_R010167 I 0.761
Ame_R009760 Ailuropoda melanoleuca Ame_R009760 I 0.911
Ame_R009570 Ailuropoda melanoleuca Ame_R009570 I 0.958
Ame_R004766 Ailuropoda melanoleuca Ame_R004766 I 0.901
fgenesh2_pg.scaffold_219000066 Branchiostoma floridae fgenesh2_pg.scaffold_219000066 I 0.752
AAH86269 Xenopus laevis AAH86269 I 0.742
AAH94189 Xenopus laevis AAH94189 I 0.906
AAH99348 Xenopus laevis AAH99348 I 0.911
Q91584 Xenopus laevis Q91584 I 0.981
Q5U259 Xenopus laevis Q5U259 I 0.742
Q1JQ73 Xenopus laevis Q1JQ73 I 0.713
CBU92440 Xenopus laevis CBU92440 I 0.911
CBF67567 Xenopus laevis CBF67567 I 0.911
CAA59430 Xenopus laevis CAA59430 I 0.901
AAI70539 Xenopus laevis AAI70539 I 0.906
AAI69769 Xenopus laevis AAI69769 I 0.981
AAI16460 Xenopus laevis AAI16460 I 0.713
fgenesh2_pg.C_sca_14000012 Lottia gigantea fgenesh2_pg.C_sca_14000012 I 0.718
fgenesh1_pg.C_scaffold_8000205 Daphnia pulex fgenesh1_pg.C_scaffold_8000205 I 0.710
elavl2 Xenopus tropicalis ENSXETG00000009387 I 0.750
elavl1 Xenopus tropicalis ENSXETG00000008752 I 0.746
elavl4 Xenopus tropicalis ENSXETG00000008680 I 0.911
ELAVL4 Vicugna pacos ENSVPAG00000011606 I 0.911
ELAVL2 Vicugna pacos ENSVPAG00000005109 I 0.901
ELAVL2 Tursiops truncatus ENSTTRG00000011656 I 0.897
ELAVL3 Tursiops truncatus ENSTTRG00000001789 I 0.958
ELAVL2 Tarsius syrichta ENSTSYG00000013066 I 0.882
ELAVL1 Tarsius syrichta ENSTSYG00000008248 I 0.761
elavl3 Xenopus tropicalis ENSXETG00000016741 I 0.972
GF14992 Drosophila ananassae FBgn0092017 I 0.700
GG24901 Drosophila erecta FBgn0117030 I 0.700
estExt_Genewise1Plus.C_1660036 Capitella teleta estExt_Genewise1Plus.C_1660036 I 0.701
GA28809-RA Drosophila pseudoobscura FBgn0250168 I 0.700
GE18193 Drosophila yakuba FBgn0235624 I 0.700
GK14865 Drosophila willistoni FBgn0216870 I 0.700
GJ13991 Drosophila virilis FBgn0201209 I 0.700
GM18380 Drosophila sechellia FBgn0173287 I 0.700
GL26299 Drosophila persimilis FBgn0163881 I 0.714
GI11879 Drosophila mojavensis FBgn0134637 I 0.700
GH13638 Drosophila grimshawi FBgn0121114 I 0.709
ELAVL4 Tarsius syrichta ENSTSYG00000004130 I 0.911
ELAVL1 Ochotona princeps ENSOPRG00000009691 I 0.770
ELAVL3 Homo sapiens ENSG00000196361 I 0.958
Elavl1 Dipodomys ordii ENSDORG00000009158 I 0.761
Elavl3 Dipodomys ordii ENSDORG00000002538 I 0.939
ELAVL2 Dasypus novemcinctus ENSDNOG00000016605 I 0.742
ELAVL1 Dasypus novemcinctus ENSDNOG00000008797 I 0.759
ELAVL4 Dasypus novemcinctus ENSDNOG00000002932 I 0.911
elavl4 Danio rerio ENSDARG00000045639 I 0.898
elavl2 Danio rerio ENSDARG00000040732 I 0.883
elavl1 Danio rerio ENSDARG00000038695 I 0.759
hug Danio rerio ENSDARG00000016405 I 0.774
Elavl2 Dipodomys ordii ENSDORG00000010437 I 0.901
Elavl4 Dipodomys ordii ENSDORG00000012729 I 0.911
LOC100060819 Equus caballus ENSECAG00000019459 I 0.756
CpipJ_CPIJ000395 Culex pipiens CpipJ_CPIJ000395 I 0.702
ELAVL1 Felis catus ENSFCAG00000014947 I 0.761
ELAVL4 Echinops telfairi ENSETEG00000013779 I 0.770
ELAVL2 Echinops telfairi ENSETEG00000006134 I 0.901
ELAVL4 Erinaceus europaeus ENSEEUG00000008766 I 0.911
ELAVL2 Erinaceus europaeus ENSEEUG00000008733 I 0.742
LOC100051268 Equus caballus ENSECAG00000022284 I 0.911
LOC100056901 Equus caballus ENSECAG00000020594 I 0.882
ELAVL2 Equus caballus ENSECAG00000020142 I 0.901
elavl3 Danio rerio ENSDARG00000014420 I 0.962
ENSCSAVG00000003440 Ciona savignyi ENSCSAVG00000003440 I 0.710
ENSCPOG00000022816 Cavia porcellus ENSCPOG00000022816 I 0.732
Q3ZCE2_BOVIN Bos taurus ENSBTAG00000000613 I 0.756
ELAVL2 Anolis carolinensis ENSACAG00000017521 I 0.906
ELAVL4 Anolis carolinensis ENSACAG00000004527 I 0.911
CPIJ016143 Culex quinquefasciatus CPIJ016143 I 0.728
CPIJ000395 Culex quinquefasciatus CPIJ000395 I 0.702
AGAP000965 Anopheles gambiae AGAP000965 I 0.728
nasonia_NCBI_hmm330804 Nasonia vitripennis nasonia_NCBI_hmm330804 I 0.742
amel4_ncbi_hmm5219 Apis mellifera amel4_ncbi_hmm5219 I 0.746
ELAVL3 Bos taurus ENSBTAG00000014412 I 0.958
A2VDK5_BOVIN Bos taurus ENSBTAG00000021046 I 0.911
ELAVL2 Canis familiaris ENSCAFG00000001688 I 0.901
ELAVL2 Cavia porcellus ENSCPOG00000010472 I 0.901
ENSCPOG00000002044 Cavia porcellus ENSCPOG00000002044 I 0.911
ELAVL4 Callithrix jacchus ENSCJAG00000013725 I 0.911
ELAVL2 Callithrix jacchus ENSCJAG00000008064 I 0.901
ELAVL4 Choloepus hoffmanni ENSCHOG00000002464 I 0.911
ELAVL2 Choloepus hoffmanni ENSCHOG00000000635 I 0.765
ENSCAFG00000018353 Canis familiaris ENSCAFG00000018353 I 0.761
ELAVL3 Canis familiaris ENSCAFG00000017350 I 0.958
ELAVL4 Canis familiaris ENSCAFG00000003927 I 0.911
CpipJ_CPIJ016143 Culex pipiens CpipJ_CPIJ016143 I 0.728
ELAVL4 Otolemur garnettii ENSOGAG00000016990 I 0.911
ELAVL1 Monodelphis domestica ENSMODG00000005041 I 0.761
LOC100015949 Monodelphis domestica ENSMODG00000003936 I 0.906
ENSMODG00000003850 Monodelphis domestica ENSMODG00000003850 I 0.716
ELAVL4 Monodelphis domestica ENSMODG00000001300 I 0.911
ELAVL4 Macaca mulatta ENSMMUG00000021933 I 0.911
LOC708195 Macaca mulatta ENSMMUG00000010038 I 0.901
ELAVL1 Macaca mulatta ENSMMUG00000006544 I 0.761
ELAVL2 Myotis lucifugus ENSMLUG00000014210 I 0.897
ELAVL1 Myotis lucifugus ENSMLUG00000008101 I 0.765
ELAVL3 Monodelphis domestica ENSMODG00000006653 I 0.948
Elavl3 Mus musculus ENSMUSG00000003410 I 0.948
Elavl2 Mus musculus ENSMUSG00000008489 I 0.901
ELAVL2 Otolemur garnettii ENSOGAG00000016228 I 0.761
ELAVL1 Otolemur garnettii ENSOGAG00000012877 I 0.761
ELAVL3 Otolemur garnettii ENSOGAG00000007072 I 0.958
ELAVL4 Oryctolagus cuniculus ENSOCUG00000016262 I 0.911
D7R608_RABIT Oryctolagus cuniculus ENSOCUG00000015871 I 0.770
ELAVL2 Oryctolagus cuniculus ENSOCUG00000005891 I 0.901
ELAVL2 Ornithorhynchus anatinus ENSOANG00000009634 I 0.811
Elavl1 Mus musculus ENSMUSG00000040028 I 0.761
Elavl4 Mus musculus ENSMUSG00000028546 I 0.911
ELAVL4 Myotis lucifugus ENSMLUG00000006226 I 0.911
ELAVL1 Microcebus murinus ENSMICG00000009699 I 0.761
ELAVL4 Microcebus murinus ENSMICG00000003286 I 0.911
ELAVL2 Gorilla gorilla ENSGGOG00000003678 I 0.901
ELAVL4 Gorilla gorilla ENSGGOG00000000634 I 0.911
ELAVL2 Gallus gallus ENSGALG00000015799 I 0.892
Q9PW22_CHICK Gallus gallus ENSGALG00000010533 I 0.911
Q9PW24_CHICK Gallus gallus ENSGALG00000000726 I 0.756
ELAVL2 Gasterosteus aculeatus ENSGACG00000019484 I 0.892
ELAVL3 Gasterosteus aculeatus ENSGACG00000013839 I 0.962
ELAVL1 Gasterosteus aculeatus ENSGACG00000013329 I 0.708
ELAVL4 Gasterosteus aculeatus ENSGACG00000011152 I 0.906
ELAVL1 Gorilla gorilla ENSGGOG00000006100 I 0.761
ELAVL3 Gorilla gorilla ENSGGOG00000008635 I 0.958
ELAVL4 Loxodonta africana ENSLAFG00000001087 I 0.911
ELAVL2 Microcebus murinus ENSMICG00000001558 I 0.717
ELAVL4 Meleagris gallopavo ENSMGAG00000010928 I 0.911
ELAVL1 Meleagris gallopavo ENSMGAG00000001015 I 0.756
ELAVL3 Macropus eugenii ENSMEUG00000016706 I 0.995
ELAVL4 Macropus eugenii ENSMEUG00000007145 I 0.911
ELAVL2 Macropus eugenii ENSMEUG00000006499 I 0.769
ELAVL2 Loxodonta africana ENSLAFG00000009938 I 0.901
ELAVL3 Loxodonta africana ENSLAFG00000005013 I 0.958
ELAVL1 Loxodonta africana ENSLAFG00000004219 I 0.761
ELAVL1 Gasterosteus aculeatus ENSGACG00000010657 I 0.752